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| The name of your search is: | default |
| Search for sites by WeightMatrix library: | matrixTFP60.lib | | Sequence file: | UPS_ORF13_pRi8196.seq | | Matrix groups: | all | | Cut-offs: | to minimize false positive matches | |
| Scanning sequence ID: ORF13_UPS Arhizogenes; |
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matrix position core matrix sequence (always the factor name
identifier (strand) match match (+)-strand is shown)
V$SRY_01 1 (-) 1.000 1.000 ttTGTTT SRY
I$HSF_01 20 (-) 1.000 1.000 TTTCT HSF
I$HSF_01 44 (-) 1.000 1.000 TTTCT HSF
F$HSF_01 65 (-) 1.000 1.000 GTTCT HSF
V$CEBP_01 84 (-) 0.979 0.960 atatgaCCACAct C/EBP
V$AML1_01 89 (-) 1.000 1.000 ACCACa AML-1a
F$MATALPHA2_01 178 (+) 1.000 0.971 cCATGTaaag MATalpha2
V$CDXA_01 206 (-) 1.000 0.971 gaTAAAT CdxA
V$PAX4_02 229 (-) 0.987 0.969 cctAATTTttt Pax-4
V$HOXA3_01 229 (+) 1.000 0.969 CCTAAtttt HOXA3
V$PAX4_02 300 (-) 1.000 0.949 ctgAATTAttt Pax-4
I$HSF_01 333 (-) 1.000 1.000 TTTCT HSF
I$HSF_01 347 (+) 1.000 1.000 AGAAA HSF
V$CEBP_Q2 355 (-) 1.000 0.961 ttttaaaGCAATat C/EBP
I$HSF_01 390 (+) 1.000 1.000 AGAAA HSF
V$PAX4_02 406 (+) 1.000 0.966 aaaTAATTtgc Pax-4
Total sequences length=501
Total number of sites found=16
Frequency of sites per nucleotide=0.031936