BLASTN 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1142807702-31125-164247156671.BLASTQ4


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           3,793,279 sequences; 16,835,315,887 total letters
 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports


Query=  gi|6706117|emb|AJ271050.1|ARH271050 Agrobacterium rhizogenes plasmid pRi2659 
T-DNA sequence, ORF2, ORF3, ORF4, ORF8, ORF10, ORF11, ORF12, ORF13, 
ORF13a, ORF14 and cus gene
Length=16110

                                                                   Score     E
Sequences producing significant alignments:                        (Bits)  Value

gi|19352108|dbj|AB071334.1|  Nicotiana glauca cT-DNA right arm...   664    0.0   
gi|19676|emb|X03432.1|NGROLBC  Nicotiana glauca rolB-C genes h...   632    7e-177
gi|11138767|gb|AF281251.1|AF281251  Nicotiana debneyi Agrobact...   535    1e-147
gi|531050|dbj|D16559.1|TOBNGORF  Nicotiana glauca NgORF13 and NgO   519    8e-143
gi|11138768|gb|AF281252.1|AF281252  Nicotiana cordifolia Agrob...   442    1e-119
gi|11138760|gb|AF281244.1|AF281244  Nicotiana cordifolia Agrob...   436    9e-118
gi|11138763|gb|AF281247.1|AF281247  Nicotiana otophora Agrobac...   341    4e-89 
gi|11138761|gb|AF281245.1|AF281245  Nicotiana tomentosiformis ...   311    3e-80 
gi|11138764|gb|AF281248.1|AF281248  Nicotiana cordifolia Agrob...   309    1e-79 
gi|11138762|gb|AF281246.1|AF281246  Nicotiana tabacum Agrobact...   301    3e-77 
gi|62638137|gb|AY847699.1|  Catharanthus roseus clone CrN12 T-DNA   170    8e-38 
gi|62638136|gb|AY847698.1|  Catharanthus roseus clone CrS9 T-DNA    155    5e-33 
gi|62638135|gb|AY847697.1|  Catharanthus roseus clone CrH9 T-DNA    155    5e-33 
gi|62638134|gb|AY847696.1|  Catharanthus trichophyllus clone Ct9    155    5e-33 
gi|11138758|gb|AF281242.1|AF281242  Nicotiana tabacum Agrobact...   145    5e-30 
gi|11138757|gb|AF281241.1|AF281241  Nicotiana tomentosiformis ...   145    5e-30 
gi|3021556|emb|AJ005289.1|PTAJ5289  Populus tremula x Populus ...   137    1e-27 
gi|3859071|emb|AJ007621.1|NTAJ7621  Nicotiana tabacum torf13-1 ge   121    7e-23 
gi|3859073|emb|AJ007622.1|NTAJ7622  Nicotiana tabacum torf13-2 ge   109    3e-19 
gi|450493|emb|X76001.1|ATROL1001  A.thaliana rolA gene (10null1-1   101    6e-17   
gi|11138759|gb|AF281243.1|AF281243  Nicotiana otophora Agrobac...  60.0    2e-04 
gi|3947717|emb|AJ010794.1|NTA010794  Nicotiana tabacum trolC-torf  60.0    2e-04 
gi|71833943|emb|BX664703.21|  Zebrafish DNA sequence from clon...  54.0    0.013 
gi|34366541|emb|AL929512.14|  Zebrafish DNA sequence from clone C  54.0    0.013 
gi|15982218|emb|AJ311874.1|CVE311874  Cloning vector pHELLSGATE    54.0    0.013 
gi|33320493|gb|AF489904.1|  Cloning vector pHellsgate 8, complete  54.0    0.013 
gi|62084031|emb|CR376751.15|  Zebrafish DNA sequence from clon...  52.0    0.052 
gi|62084020|emb|CR847797.8|  Zebrafish DNA sequence from clone...  52.0    0.052 
gi|41351569|gb|AC110219.11|  Mus musculus chromosome 1, clone RP2  50.1    0.20  
gi|11138766|gb|AF281250.1|AF281250  Nicotiana otophora Agrobac...  50.1    0.20  
gi|11138765|gb|AF281249.1|AF281249  Nicotiana tomentosiformis ...  50.1    0.20  
gi|1150515|emb|X91881.1|NTTROLCGN  N.tabacum trolC gene            50.1    0.20  
gi|29466492|emb|AL928826.9|  Mouse DNA sequence from clone RP2...  50.1    0.20  
gi|53378868|gb|AC137068.4|  Mus musculus BAC clone RP23-283C17 fr  50.1    0.20  
gi|49406002|gb|AC146852.15|  Medicago truncatula clone mth2-58k21  48.1    0.81  
gi|35187402|gb|AY395747.1|  Helisoma trivolvis type 7 serotonin r  48.1    0.81  
gi|34099039|gb|AC102643.9|  Mus musculus chromosome 8, clone RP23  48.1    0.81  
gi|23497540|gb|AE014824.1|  Plasmodium falciparum 3D7 chromoso...  48.1    0.81  
gi|71533304|gb|AC162519.4|  Mus musculus chromosome 8, clone RP24  48.1    0.81  
gi|61674134|emb|CR933104.2|  Medicago truncatula chromosome 5 ...  48.1    0.81  
gi|22859037|emb|AL669941.12|  Mouse DNA sequence from clone RP...  48.1    0.81  
gi|20128753|gb|AC104830.4|  Homo sapiens BAC clone RP11-811O14 fr  48.1    0.81  
gi|27476189|gb|AC122281.2|  Mus musculus chromosome 16 clone RP23  48.1    0.81  
gi|8051651|dbj|AP002043.1|  Arabidopsis thaliana genomic DNA, chr  48.1    0.81  
gi|51854654|gb|AC150034.2|  Mus musculus BAC clone RP23-428H16 fr  48.1    0.81  
gi|25004499|emb|AL732633.6|  Mouse DNA sequence from clone RP2...  48.1    0.81  
gi|167288|gb|M13196.1|COARIPJ  C.arvensis RI plasmid TL-DNA/plant  48.1    0.81  
gi|167287|gb|K03280.1|COARIINT  C.arvensis DNA, 5' flank of Ri pl  48.1    0.81  
gi|56404039|gb|AC149530.2|  Xenopus tropicalis clone ISB-301B24,   46.1    3.2   
gi|51870865|gb|AC138741.7|  Mus musculus chromosome 1, clone RP24  46.1    3.2   
gi|76676169|ref|XM_610789.2|  PREDICTED: Bos taurus similar to...  46.1    3.2     
gi|51491591|gb|AC149538.2|  Xenopus tropicalis clone ISB-392F6, c  46.1    3.2   
gi|48762524|gb|AC084315.4|  Mus musculus strain C57BL6/J chrom...  46.1    3.2   
gi|46559450|gb|AC068500.4|  Mus musculus strain C57BL6/J chrom...  46.1    3.2   
gi|21536171|gb|AC116582.3|  Mus musculus BAC clone RP23-340C13 fr  46.1    3.2   
gi|21844695|gb|AC116657.3|  Mus musculus BAC clone RP23-289E18 fr  46.1    3.2   
gi|22596996|gb|AF513744.1|  Battus philenor haplotype M cytoch...  46.1    3.2   
gi|22596968|gb|AF513730.1|  Battus philenor haplotype C cytoch...  46.1    3.2   
gi|71533438|gb|AC164432.3|  Mus musculus BAC clone RP23-394G23...  46.1    3.2   
gi|71480385|gb|AC160133.2|  Mus musculus BAC clone RP23-186M2 ...  46.1    3.2   
gi|17065842|emb|AL645817.1|  Human DNA sequence from clone RP1...  46.1    3.2   
gi|20149422|gb|AC104212.3|  Homo sapiens chromosome 8, clone RP11  46.1    3.2   
gi|55859648|emb|BX950217.14|  Zebrafish DNA sequence from clon...  46.1    3.2   
gi|17488671|gb|AC090936.8|  Homo sapiens chromosome 18, clone ...  46.1    3.2   
gi|26104035|dbj|AK087119.1|  Mus musculus 0 day neonate lung c...  46.1    3.2   
gi|13876483|gb|AC008549.6|AC008549  Homo sapiens chromosome 5 clo  46.1    3.2   
gi|58531193|dbj|AP008212.1|  Oryza sativa (japonica cultivar-g...  46.1    3.2   
gi|51535594|dbj|AP003579.3|  Oryza sativa (japonica cultivar-g...  46.1    3.2   
gi|1834463|emb|Z84816.1|HS2A2B  Human DNA sequence from PAC 2A2 o  46.1    3.2   
gi|31335589|emb|AL845274.17|  Mouse DNA sequence from clone RP...  46.1    3.2   
gi|55583597|gb|AC134525.5|  Mus musculus BAC clone RP24-496F7 fro  46.1    3.2   

Alignments

>gi|19352108|dbj|AB071334.1|  Nicotiana glauca cT-DNA right arm Ngorf13R, Ngorf13aR, Ngor14R, 
NgmisR genes, complete cds
Length=6116

 Score =  664 bits (335),  Expect = 0.0
 Identities = 707/825 (85%), Gaps = 12/825 (1%)
 Strand=Plus/Plus

Query  11292  TTCATGATTGTTCAATAATTTCTGTAGCAAATGGAAAACGTTTTACAAACAATGTGGCCT  11351
              ||||||| |||| ||| ||||||||||||||| |||||||||||  ||||||||||||||
Sbjct  519    TTCATGAGTGTTGAATGATTTCTGTAGCAAATAGAAAACGTTTTCAAAACAATGTGGCCT  578

Query  11352  TGGAGTAATAATCGGAAGAAAAGTTCATAAGTCAGATAATTTGCGTTGCTGACACTAGTG  11411
              ||| ||||  | |||| |||| |  |||    |||||||||||||||||||||||| || 
Sbjct  579    TGGGGTAAACACCGGATGAAACGGCCATGCC-CAGATAATTTGCGTTGCTGACACTCGTA  637

Query  11412  ACCAAGCACCTTTAAATACCT-CTGCTTCCCATGCATTTTT-CCAAGTT-----AACCTA  11464
              ||| | ||||||||||||||| ||||||||||||||||||| ||| |||     ||||| 
Sbjct  638    ACCCACCACCTTTAAATACCTTCTGCTTCCCATGCATTTTTGCCAGGTTGAACAAACCTT  697

Query  11465  AAGTGGCAGTTGAA-TGGCTCGTTATTTCGGTGGTAGCTCTCAACGGCTTCATGTCGATG  11523
              |||||||||| ||| ||||||||  || ||||   ||||||| |||||||||||||||| 
Sbjct  698    AAGTGGCAGTCGAAATGGCTCGTCCTTCCGGT---AGCTCTCCACGGCTTCATGTCGATA  754

Query  11524  ATTTTCGTTTGATCAAGGAGCCCACTCGACTGAAGGCTCAGCTTGTTAATGTGGTGGAAA  11583
              ||||  ||| ||||||||||||||||||| |||||||||||||| | |||||||||||| 
Sbjct  755    ATTTATGTTGGATCAAGGAGCCCACTCGATTGAAGGCTCAGCTTATGAATGTGGTGGAAG  814

Query  11584  CCTACAAGGCTGCACAAACAGAGACGTTAAAGTACTATATACCATCTGCAACTGAGCGTG  11643
              |||||||| |||||||| ||||||| |||||||||||||||||||||||| |||||| ||
Sbjct  815    CCTACAAGCCTGCACAACCAGAGACATTAAAGTACTATATACCATCTGCAGCTGAGCATG  874

Query  11644  TGGCTCATATGGAGGCAGTCCATGTCAACAATGCAGAAATGGGGCTGCATCCGGCCGGGT  11703
               | ||||| | ||||| | | |||||||| |||| ||||||| ||| |||||||| ||||
Sbjct  875    GGACTCATGTAGAGGCGGCCTATGTCAACGATGCGGAAATGGAGCTTCATCCGGCTGGGT  934

Query  11704  TCAAGTATCCTCTGTCCTTCGTCTTTACCTCCCTGGCCGTGGCTAAAGCCTGCAAGGAGA  11763
              | ||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct  935    TGAAGTATCCTTTGTCTTTCGTCTTTACCTCCCTGGCCGTGGCTAAAGCCTACAAGGAGA  994

Query  11764  ACAAGCATCTCGTGTGCGAGGAGCATTTGGAGGGAGATCTGATATCGTGCGTCGTTCCTC  11823
               |||||||||| |||||||||| |||| ||| || |||||| || | |||||||||||||
Sbjct  995    CCAAGCATCTCTTGTGCGAGGAACATTGGGATGGGGATCTGTTAGCCTGCGTCGTTCCTC  1054

Query  11824  CCTATCAGACAAATGTCTCACTCGCTGCTTTAAGGGAGATCCACAATTCCATTTCGGGAG  11883
              | |||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||
Sbjct  1055   CTTATCAGACAAATGTCTCACTGGCTGCTTTAAGGGAAATCCACAATTCCTTTTCGGGAG  1114

Query  11884  GAGGGTACCGGAATCCAACAGACATGGATTATTTTGTGGCGATCTTGCCAGATGAAAATT  11943
              ||||||||| | | | |||||||||||||||||||||||| ||| | ||||||||||| |
Sbjct  1115   GAGGGTACCAGGAACAAACAGACATGGATTATTTTGTGGCAATCCTCCCAGATGAAAAAT  1174

Query  11944  TCGACTATCAGAGCTGTGAAATTGTCACCAAAAATGGCGGCGAAGGCCTTTGCAAGATTT  12003
              | | ||||||||||   ||||| |  ||   || ||||||  |||| |||||||||||||
Sbjct  1175   TTGGCTATCAGAGCCTCGAAATCGAGACACGAAGTGGCGGTAAAGGACTTTGCAAGATTT  1234

Query  12004  ATAGCAGACAACTGGAGGGGCCCTTAGCTTATGAGGCCATACTGGCAATTGGCAAGGTCC  12063
              |||||||  |||||| |||||| ||||||||||| |||||||||||||| |||||||| |
Sbjct  1235   ATAGCAGGGAACTGGGGGGGCCTTTAGCTTATGACGCCATACTGGCAATCGGCAAGGTGC  1294

Query  12064  TGTTGGAATAGGCAGTGCACCGCTGATCCAACGGGAGTTTCGATT  12108
              || |||||||  |||||| ||||||| || |||||||||||||||
Sbjct  1295   TGCTGGAATAAACAGTGCGCCGCTGAACCGACGGGAGTTTCGATT  1339


 Score =  359 bits (181),  Expect = 2e-94
 Identities = 465/559 (83%), Gaps = 3/559 (0%)
 Strand=Plus/Plus

Query  13413  GCTAAAGCATGAGCATGGCAGATGAGTTGGAGCGTCAATTGGAAGGCATTTCTCTCGTTA  13472
              |||||||||| | ||||| |||||||||| | | |||||| ||||   |||||||||| |
Sbjct  2672   GCTAAAGCATAACCATGGAAGATGAGTTGAATCATCAATTCGAAGCTCTTTCTCTCGTCA  2731

Query  13473  CAGTCCTGGGTCCGGATGTGAGGGCCGAGCTTGAGGCGGCGCTACGGGACTACCGCGATG  13532
              ||||||||||||||||||||| ||| |||||||||||||| ||||  ||||||| |||||
Sbjct  2732   CAGTCCTGGGTCCGGATGTGAAGGCTGAGCTTGAGGCGGCACTACTTGACTACCACGATG  2791

Query  13533  ATCTCGACTTCTGGAAAAGGAACGGTTACGCGGTGGCGGATCTCGATCAATCTGTGACGG  13592
              |||||||| ||||||||||   ||||||| |||||  ||| ||||||||  || ||||||
Sbjct  2792   ATCTCGACCTCTGGAAAAGCTGCGGTTACCCGGTGCTGGACCTCGATCAGACTATGACGG  2851

Query  13593  TCGACAAGCTTCTTTTTATGTATATGGATGAACCAATAGCAGACTTGTGTGTAAAGAATC  13652
              ||||||||||||||| |||||||||||||  | ||| |||||| | |||| |   ||  |
Sbjct  2852   TCGACAAGCTTCTTTATATGTATATGGATCGATCAACAGCAGAGTGGTGTATGTGGAGAC  2911

Query  13653  GCATCCTCGTTTGCAACAG---CAATTCAGTCGCGAAAATTACTTCGCTTCCACCATACC  13709
              ||  |||||||||||||||   |||||||  ||| ||| | || ||||| ||||||||||
Sbjct  2912   GCTGCCTCGTTTGCAACAGTAGCAATTCAACCGCAAAAGTAACCTCGCTGCCACCATACC  2971

Query  13710  TGCCTGGGGTTACAAGGGCCGAGGCGTTTGAGAAACTTAACTCCATTGTTTGTGGAGGTC  13769
              ||   || || ||||| |||||||||||||||||||| ||||||||||||  ||| ||| 
Sbjct  2972   TGGTAGGCGTGACAAGCGCCGAGGCGTTTGAGAAACTCAACTCCATTGTTGATGGGGGTG  3031

Query  13770  CTGCATCTGGATCTCTTCAATCTGCTTGTTGCGACTATTTCGTGGCGTTCCTCCCCAGCA  13829
              ||||| | ||||||||| |  ||||||||| | ||||||| ||||||||||| ||| |||
Sbjct  3032   CTGCACCCGGATCTCTTGAGCCTGCTTGTTACAACTATTTTGTGGCGTTCCTGCCCGGCA  3091

Query  13830  ATTGTTTTGAGAAGACCGGTGAGATATCGGTGCGCACAGTGGACGGCGAGTGTGGCCCCT  13889
              ||||||| ||||||||||||||| ||||||| |||||||| ||||||||||||   ||||
Sbjct  3092   ATTGTTTCGAGAAGACCGGTGAGTTATCGGTCCGCACAGTTGACGGCGAGTGTATGCCCT  3151

Query  13890  TCGATGTCTTTACCCGGCAGCGTCAGCCAGAGGATCAGAGCGATATGTTTTTTAAGTATG  13949
              || ||||||| ||| |||||| ||||||| |||||| ||| || |   ||||||| ||||
Sbjct  3152   TCTATGTCTTCACCAGGCAGCATCAGCCACAGGATCCGAGTGAAAAAGTTTTTAAATATG  3211

Query  13950  AAGAGATTGTATGTGCTGG  13968
              |||| ||||||||||||||
Sbjct  3212   AAGAAATTGTATGTGCTGG  3230


 Score =  172 bits (87),  Expect = 2e-38
 Identities = 233/281 (82%), Gaps = 8/281 (2%)
 Strand=Plus/Plus

Query  12480  GAGAGAGCACGCAGATTGTAGCCAAGTTGAGTGACTTGCCGGTAGCACCGAAGCTAAGCT  12539
              ||||||||||| || |||||||||||||||||| |||||||||||| |||||||||||||
Sbjct  1737   GAGAGAGCACGTAGGTTGTAGCCAAGTTGAGTGGCTTGCCGGTAGCGCCGAAGCTAAGCT  1796

Query  12540  --CAGGTGTTCCAAATTGACTGGCGTCGAGGTGACGAGCACGACGACCTTGCCGGACAAT  12597
                || ||||||||||   |||||||| |||| |||||| ||||      ||||||| | |
Sbjct  1797   GTCAAGTGTTCCAAACAAACTGGCGTTGAGGCGACGAGGACGA------TGCCGGAGATT  1850

Query  12598  GCGGTCGCAGGGGGCTCAAGGCGGGTGGCTTGTAACGGACCTTGTGCTTCTTGTTGTAGC  12657
              || ||||| | || | ||| |||||||||||||||||||| ||| ||| |||| ||||||
Sbjct  1851   GCTGTCGCTGAGGACGCAAAGCGGGTGGCTTGTAACGGACGTTGAGCTCCTTGCTGTAGC  1910

Query  12658  TTTCGTTGAGCATAACCATTGGGAAGGTTGCTGAACAACGGTAGCGCACCTTTTTCAAGC  12717
              |||| ||||||||| ||||||||  |||| | |||||||||||  ||||||||| |||||
Sbjct  1911   TTTCATTGAGCATAGCCATTGGGGCGGTTTCAGAACAACGGTAAAGCACCTTTTGCAAGC  1970

Query  12718  GAGGGTGGCAGAAGAACATATTTGCCCGTCGGCAGACGGCG  12758
              ||| | ||  ||||  || |||| |||||||||||||||||
Sbjct  1971   GAGCGAGGTGGAAGCGCAGATTTCCCCGTCGGCAGACGGCG  2011


 Score =  117 bits (59),  Expect = 1e-21
 Identities = 245/295 (83%), Gaps = 14/295 (4%)
 Strand=Plus/Plus

Query  10837  CTAGAAATATAAATGTAATAAAC-TCATGGATCTGGTT-GATGTAACCTGCGCCATGGAT  10894
              ||||||| || ||| |||||||| |||||||||||||| ||||||||||  ||||| |||
Sbjct  46     CTAGAAAAATCAATATAATAAACATCATGGATCTGGTTTGATGTAACCTATGCCATTGAT  105

Query  10895  GCACTTGTTCTTTTTTGGTTCCGA-TGGATGGGTTGTTTGCTT-GAAATGAAACCTGCCT  10952
              ||| |||| ||||||     |||| || |||||| |||||||| ||||| ||||||||||
Sbjct  106    GCAATTGTCCTTTTTC----CCGACTGAATGGGTCGTTTGCTTTGAAATTAAACCTGCCT  161

Query  10953  GTTCGAAATTTGGTTATC-ACTTTTTCCATTTATGTTTTT-AATTATTTGTGTATTAAAG  11010
              ||| || ||||||||||  ||||| || || ||||||||| ||||  || ||| |||| |
Sbjct  162    GTTTGACATTTGGTTATTGACTTTCTCGATCTATGTTTTTTAATTGGTTTTGTCTTAAGG  221

Query  11011  AAAATAGTTC--ACATAGCCGCAATATATGACCGAAGCTGGCCCGCAATGCCGCAATAGA  11068
              ||||| || |  ||||||||||||||||||||| || ||||||| | | |||| ||||||
Sbjct  222    AAAATCGTCCCCACATAGCCGCAATATATGACCAAAACTGGCCCAC-ACGCCGTAATAGA  280

Query  11069  TGATTAATTTGTCAAACTTAGCTATCAATATCTCGATAGAAGTGCCCACATGTTT  11123
              ||||||||||| |||  |||||||||||| |||| | ||||||||| ||||||||
Sbjct  281    TGATTAATTTGCCAACATTAGCTATCAATCTCTC-AAAGAAGTGCCGACATGTTT  334


 Score = 58.0 bits (29),  Expect = 8e-04
 Identities = 50/57 (87%), Gaps = 0/57 (0%)
 Strand=Plus/Plus

Query  11202  AATTCAACATAAAGAAACCAGAAGTCAGAGGAAAGACTTTTAATCCTTGATTATTTG  11258
              |||||||||||| ||||||| ||||| || | ||||||||||||||  |||||||||
Sbjct  428    AATTCAACATAAGGAAACCAAAAGTCGGAAGGAAGACTTTTAATCCAGGATTATTTG  484


 Score = 50.1 bits (25),  Expect = 0.20
 Identities = 61/73 (83%), Gaps = 0/73 (0%)
 Strand=Plus/Plus

Query  13137  TGATTGGCTGAGCTGCGAGACCACCAATAACTTCCACTAATATCGAAAGTGTGGCTGCTT  13196
              ||||| ||||| ||||  |||||| | | ||| ||||||||| || ||||| ||||||||
Sbjct  2402   TGATTTGCTGATCTGCAGGACCACAATTGACTGCCACTAATACCGGAAGTGGGGCTGCTT  2461

Query  13197  TGATTATGATGCT  13209
               ||||||||||||
Sbjct  2462   CGATTATGATGCT  2474


>gi|19676|emb|X03432.1|NGROLBC  Nicotiana glauca rolB-C genes homolog. to TL-DNA of A. rhizogenes 
pRiA4b plasmid
Length=3141

 Score =  632 bits (319),  Expect = 7e-177
 Identities = 633/731 (86%), Gaps = 5/731 (0%)
 Strand=Plus/Minus

Query  10080  AAATGTGAGACGTGGAACATCGATAGTCGTATAATTTATGAATATTGGGTTTTGCAGCTA  10139
              ||||||| ||||||||||||||| ||||| || |||| | ||||||   | ||||| |||
Sbjct  850    AAATGTGCGACGTGGAACATCGACAGTCGCATCATTTGTTAATATTAT-TGTTGCATCTA  792

Query  10140  TACCTAACT-GATATTCAACTCATATA-AGCAAA-AGCATCTATAAAGGG-AATGGTGCT  10195
              ||||||||| |||| |||||||||||| || ||| | ||||||||||  | || ||||||
Sbjct  791    TACCTAACTCGATACTCAACTCATATACAGTAAATAACATCTATAAATAGTAAGGGTGCT  732

Query  10196  TCCAGTTCTGGGTGCACGCCACTATTGTTTCCTACTTTGCTAACATGGCGGAATTTGACC  10255
              || |||||||||| || ||||||| |||||||||||||||||||||||| ||| ||||||
Sbjct  731    TCGAGTTCTGGGTACAAGCCACTACTGTTTCCTACTTTGCTAACATGGCTGAAGTTGACC  672

Query  10256  TATGTGCTCTCTTTTCCAGTCTTAAGGTAGGCGACGTATCGTCCAGCGATGAGCTAAAGA  10315
              | ||||||||||||| || ||| | |||    |||||  |||||||||||||||||||||
Sbjct  671    TGTGTGCTCTCTTTTTCAATCTCAGGGTCAAGGACGTGACGTCCAGCGATGAGCTAAAGA  612

Query  10316  AACACATCCAGAGCGCCTCAAAGGAGCGGACCCCCCTGACGGAGCCGGGTGAGGGCCAGT  10375
              ||||||| | |||||||||| | ||||||| ||||||||| ||||||||||||  |||||
Sbjct  611    AACACATTCTGAGCGCCTCAGATGAGCGGAACCCCCTGACCGAGCCGGGTGAGAACCAGT  552

Query  10376  CGATGGATGTTGACGAAGAGGGCGGTCGCCAAGACCCTGGGATACTGTACCTCTACGTCG  10435
              |||||||||||||||||||||| ||   || |||||||||||||||||||||||||||||
Sbjct  551    CGATGGATGTTGACGAAGAGGGTGGAACCCGAGACCCTGGGATACTGTACCTCTACGTCG  492

Query  10436  ATTGCCCGACGATGATGCGATGCTTTTATGGAGGGTCTTTGCCCTACAATTCCACGCACG  10495
              | |||||||||||||||| |||||| ||||||  ||| || ||||||||||| | ||| |
Sbjct  491    ACTGCCCGACGATGATGCAATGCTTCTATGGAACGTCGTTCCCCTACAATTCGAGGCATG  432

Query  10496  GCGCGCTCATCACCAATCTTCCACCATACCAGAAAGATGTAAGTCTCGGTGAGGTGTGCA  10555
              |||||||| ||||||||||||| || |||||||| ||||||||| |  |||| ||||  |
Sbjct  431    GCGCGCTCCTCACCAATCTTCCGCCGTACCAGAAGGATGTAAGTTTAAGTGAAGTGTCTA  372

Query  10556  GGGGGCTTAGGCAGGCATCAGGATTCTTTGGATACGAGGATGTTATCCGGAGCGCCTACT  10615
              | |||||||||||||||||||| ||||| ||||| ||||||  |||||||||||| ||||
Sbjct  371    GAGGGCTTAGGCAGGCATCAGGTTTCTTCGGATATGAGGATCCTATCCGGAGCGCTTACT  312

Query  10616  TCGCCGCACTTTCTGTCCCCGGGTACTTCGTCAAGCTGGATGGGCAGATGGAACTAACTT  10675
              |||||||||||||| |||| ||| || | | ||||||||| | ||||||||| |||||||
Sbjct  311    TCGCCGCACTTTCTTTCCCTGGGCACGTGGCCAAGCTGGACGAGCAGATGGAGCTAACTT  252

Query  10676  CAACAAAGGGAAAGTCTCTGACCTTCGACCTTTATGCCAGCAACCAGCTCAGGCTCGAAC  10735
              | ||||| ||| ||||||||||||||||||| ||||||||| ||||||| ||||||||||
Sbjct  251    CGACAAACGGAGAGTCTCTGACCTTCGACCTCTATGCCAGCGACCAGCTTAGGCTCGAAC  192

Query  10736  CTGGTGCGTTGGTGAGGCATGGCGAATGCAAATTTGGAATGGAGTGATGGCAGTAGCTGT  10795
              ||||||||| ||||||||||||||||||||||||||||||| | |||||| |||||||| 
Sbjct  191    CTGGTGCGTGGGTGAGGCATGGCGAATGCAAATTTGGAATGAACTGATGGAAGTAGCTGG  132

Query  10796  TCTGACGGTGC  10806
              |||||||||||
Sbjct  131    TCTGACGGTGC  121


 Score =  404 bits (204),  Expect = 3e-108
 Identities = 935/1166 (80%), Gaps = 12/1166 (1%)
 Strand=Plus/Minus

Query  8248  ATAGTTAAAGGTGGCCTGCAGGGGACCTCAAGTCGCCG-AGGTTTCTTTCTTCAGATTTA  8306
             |||| |||||||||||||||||||| |||||| || |  ||| |||||||||||| ||||
Sbjct  2876  ATAGATAAAGGTGGCCTGCAGGGGAGCTCAAGCCGGCTTAGGCTTCTTTCTTCAGGTTTA  2817

Query  8307  CTATAGCAGGCTTCATATCACCCTCTTCACGTTTCTGGTTGGGTCCCGAGAGCCGCAGGG  8366
             ||||||||| ||||||  | || || || | || |||||   | ||| |||| |||||||
Sbjct  2816  CTATAGCAGACTTCATGACGCCTTCCTCGCTTTACTGGTCAAGCCCCCAGAGTCGCAGGG  2757

Query  8367  TGAGGTCTGGCTCCGGTGACGGTACCGCCGGTCGTGGCATCACGCCAGCATTTTTGGTGA  8426
             | ||||| |||||||| |||||| ||||| | ||||| |||||    ||||||| | |||
Sbjct  2756  TTAGGTCCGGCTCCGGAGACGGTGCCGCCAGACGTGGTATCACAAGGGCATTTTCGCTGA  2697

Query  8427  ACTGTGTGATGCCGCAAGCAATGACGTCATAGGAGCGGTTTCCAGTGCCTTGCCGCACGA  8486
             ||| |||  ||||| |||| |  ||||||||||  ||||||  ||   || |||| || |
Sbjct  2696  ACTATGTAGTGCCGAAAGCTACAACGTCATAGGGACGGTTTGTAGACGCTCGCCGAACAA  2637

Query  8487  AGAAGGTGCAGGCTACCTCCCTGCCGTACACATTTGTCACTTTTAACTCCAGCAGGTGAA  8546
             ||||||||||  ||||||| || || || |  || || ||||||| |  |  ||||||||
Sbjct  2636  AGAAGGTGCAATCTACCTCTCTCCCATAAAGGTTGGTGACTTTTAGCGTCGTCAGGTGAA  2577

Query  8547  TGAACAAGGTACTTGCAAAAATGGCGATAAAACCTTCCAGATCAGGTTCTTCCACGCGGC  8606
             |||||||||||||||| ||||| || || || | ||||| |||| |||||||||  ||||
Sbjct  2576  TGAACAAGGTACTTGCGAAAATAGCAATGAAGCATTCCAAATCACGTTCTTCCATCCGGC  2517

Query  8607  GGTGCGGCCAAGCAATGTTGTGAGCACGGACCATCTCCTGGAGGGCGAGGTCGCTACGAT  8666
             |||||||||| |||  ||||||  |||||| |||||| |||| |||||||||||| || |
Sbjct  2516  GGTGCGGCCAGGCACGGTTGTGGACACGGAGCATCTCTTGGACGGCGAGGTCGCTCCGGT  2457

Query  8667  AGGGTTGCATCGTGGTCGCCAGCACGGCCTCTAATCCAAACGTGATGGATTTTTCCTCCA  8726
             | ||||| ||||| ||||||||||||||||| | ||||| ||| ||||||| ||||||||
Sbjct  2456  ATGGTTGGATCGTTGTCGCCAGCACGGCCTCCATTCCAACCGTAATGGATTGTTCCTCCA  2397

Query  8727  GTACTTTCTGCATCTTCTCGCGAGATAGATAGACAAATACATGTCGGTCGTTTTCTCTGG  8786
             | ||||||||||||||||| ||||| ||||||| ||||||| || ||||  ||||||  |
Sbjct  2396  GCACTTTCTGCATCTTCTCACGAGAAAGATAGATAAATACACGTTGGTCCCTTTCTCGAG  2337

Query  8787  CCAAATCCGGTTGATCGACAAGCATGGGGGGATGATAACATACTTTGTTTTTTAGAACGA  8846
             ||||||| ||||| || |||| ||| || |||||||| || | |||||| ||||||| | 
Sbjct  2336  CCAAATCTGGTTGCTCAACAAACATAGGAGGATGATAGCAGATTTTGTTCTTTAGAA-GC  2278

Query  8847  TGGGCCAGTTGTTTAAGTATGACCA-CCGGCGACGGTTTTCCTCCAAATCAAGCACGCCT  8905
             |  |||||||||||||| ||  ||| |||  ||   ||||||||||||||||  | | | 
Sbjct  2277  TCAGCCAGTTGTTTAAGGATATCCATCCGTAGAGATTTTTCCTCCAAATCAAAGATGACA  2218

Query  8906  TGGGCCCACCTTTTCTGGAAATCCATGAGAGTTTTGCTATAGACTTGGCTATAGATTAAA  8965
             |  ||||||| ||||||| |||| |  || |||||||||||||||| ||||||| | | |
Sbjct  2217  TCAGCCCACCGTTTCTGGTAATCTAGCAGGGTTTTGCTATAGACTTCGCTATAGGTCATA  2158

Query  8966  AATGCAAATTGGATCTCATTGAACAAGTTAAGCTGGTTCCAGGCTTTTGTGAGATCTCGT  9025
             || ||| |||||||||| ||| | || || | ||| ||||  |||   ||||| | ||||
Sbjct  2157  AAAGCAGATTGGATCTCCTTGGATAAATTGATCTGCTTCCCAGCTGGAGTGAGGTTTCGT  2098

Query  9026  GGTTGAAAGCGTTGAAGGAATAGTAATCGAGGAGGCATTGTGATGTGAGGTTGGGGATAA  9085
             |||||||||||| || ||||| |  || | | || |||||| ||||||| |   ||| ||
Sbjct  2097  GGTTGAAAGCGTGGATGGAATTGCGATTGGGAAGCCATTGTAATGTGAGTT---GGACAA  2041

Query  9086  CTGTGGAATAACGGCAAGTT-CAGTGCCATTTAAAGTA-CGCCGCCGGCAAGTGGCATCA  9143
              |||| || || |||||||| |||||||||||||| ||  | | |||| |||||||  ||
Sbjct  2040  GTGTGAAACAATGGCAAGTTCCAGTGCCATTTAAAATATGGGCACCGGAAAGTGGCGCCA  1981

Query  9144  ATCAGCCACAGTTTCCGGTCGGGAAAGCCAGAGGCAATCTGGCAATAATCACCATCGCAT  9203
             ||||| |||| | || ||||||||||||||| ||||||||||||||||| |||||| |||
Sbjct  1980  ATCAGACACAATCTCTGGTCGGGAAAGCCAGGGGCAATCTGGCAATAATTACCATCCCAT  1921

Query  9204  CAAAATCGATGCTC-GGACATGGCGGCCTTAAAACCTGGATCAAGCGAAAAATAATGCCT  9262
             |||||| |||||||  ||||||| | || ||||| |||||||||| | |||||| ||| |
Sbjct  1920  CAAAATTGATGCTCAAGACATGGAGTCCCTAAAATCTGGATCAAGTG-AAAATACTGCAT  1862

Query  9263  GCTTGATTGGTCACGAGGTCATAGTAGTGGGCTAGCATTTT-TGTCTTTTTTGTTTGGCT  9321
             ||||||| | ||||| | || | ||||||||||  | |||| ||||||||||||||||||
Sbjct  1861  GCTTGATCGTTCACGGGTTCTTCGTAGTGGGCTTTCTTTTTCTGTCTTTTTTGTTTGGCT  1802

Query  9322  TTAGTGAAAGTGTATCTAAAAGATACCTGAAATGGGGAGGGGTGGGGT-AGAGCTTAAAG  9380
             ||||||||||  | |||||||||| ||   |||||||||||||||||| |||||||||||
Sbjct  1801  TTAGTGAAAGGATTTCTAAAAGATGCCCATAATGGGGAGGGGTGGGGTAAGAGCTTAAAG  1742

Query  9381  TTTGCCGAATATTGGCTTTCGTGAAA  9406
             || ||||  |||||  ||||||||||
Sbjct  1741  TTGGCCGGCTATTGAGTTTCGTGAAA  1716


 Score =  281 bits (142),  Expect = 3e-71
 Identities = 285/325 (87%), Gaps = 12/325 (3%)
 Strand=Plus/Minus

Query  9700   TGCCATACTGATACAAGTTTTAGATTTGAAGCCCATCAATCGTTTTAGAGCCCA-AAAAT  9758
              |||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct  1246   TGCCATCCTGATACAAGTTTTAGATGTGAAGCCCATCAATCGTTTTAGAGCCCAAAAAAT  1187

Query  9759   CAAAAT-GGGCCGAAATAGCATTTATCTAAAAGAAGGAATCGTGGCTA-GTTAAGTGCTT  9816
              ||||||  ||||||||||||| ||| | | ||||| |||| ||||||| |||||||||||
Sbjct  1186   CAAAATAAGGCCGAAATAGCACTTAGCCAGAAGAATGAATGGTGGCTATGTTAAGTGCTT  1127

Query  9817   TGAATGAGATCCCATGGAAAAGCGACACCTGTG------TGGTGCAGACAGGCCTAACGT  9870
              | |||||| ||||||||||||||||||||||||      |||||| ||||||||||||||
Sbjct  1126   TAAATGAGGTCCCATGGAAAAGCGACACCTGTGTGGCTTTGGTGCTGACAGGCCTAACGT  1067

Query  9871   GGTGCACAGGTTGAAAAAGTAGTG-CCTTTTCGCAGCATAAAT-AAAGGTAGGCGCGTGC  9928
              || |   || |||||||||||||| | |||||||||||||||| ||||||||||| ||||
Sbjct  1066   GGGGTTTAGCTTGAAAAAGTAGTGTCTTTTTCGCAGCATAAATAAAAGGTAGGCGGGTGC  1007

Query  9929   GACCATAATTAAAGG-AAAAAGAAAGATGCTATTGACGATGTGACACCATTATTGGACAG  9987
              | ||||||||||||| ||||||| |||| |||| ||| || || ||||||||||||||| 
Sbjct  1006   GGCCATAATTAAAGGAAAAAAGAGAGATTCTATCGACAATATGCCACCATTATTGGACAA  947

Query  9988   CAGAACCTATTCCCACTCGTGCTTT  10012
              |||||||||||||||| ||||||||
Sbjct  946    CAGAACCTATTCCCACCCGTGCTTT  922


 Score = 61.9 bits (31),  Expect = 5e-05
 Identities = 66/75 (88%), Gaps = 2/75 (2%)
 Strand=Plus/Minus

Query  10837  CTAGAAATATAAATGTAATAAAC-TCATGGATCTGGTT-GATGTAACCTGCGCCATGGAT  10894
              ||||||| || |||||||||||| |||||||||||||| ||||||||||  ||||| |||
Sbjct  80     CTAGAAAAATCAATGTAATAAACATCATGGATCTGGTTTGATGTAACCTATGCCATTGAT  21

Query  10895  GCACTTGTTCTTTTT  10909
              ||| |||| ||||||
Sbjct  20     GCAATTGTCCTTTTT  6


>gi|11138767|gb|AF281251.1|AF281251  Nicotiana debneyi Agrobacterium rhizogenes Ri plasmid rolC-like 
sequence.~~
Length=506

 Score =  535 bits (270),  Expect = 1e-147
 Identities = 426/478 (89%), Gaps = 0/478 (0%)
 Strand=Plus/Plus

Query  10288  GACGTATCGTCCAGCGATGAGCTAAAGAAACACATCCAGAGCGCCTCAAAGGAGCGGACC  10347
              |||||| ||||| ||||||||||||||||||||||||||||||||||| | ||||||| |
Sbjct  29     GACGTAACGTCCTGCGATGAGCTAAAGAAACACATCCAGAGCGCCTCAGATGAGCGGAGC  88

Query  10348  CCCCTGACGGAGCCGGGTGAGGGCCAGTCGATGGATGTTGACGAAGAGGGCGGTCGCCAA  10407
              | |||||| |||| |||||||  ||||||||||||| | ||||||||||| ||| |||||
Sbjct  89     CGCCTGACCGAGCTGGGTGAGAACCAGTCGATGGATATCGACGAAGAGGGTGGTAGCCAA  148

Query  10408  GACCCTGGGATACTGTACCTCTACGTCGATTGCCCGACGATGATGCGATGCTTTTATGGA  10467
              |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct  149    GACCCTGGGATACTGTACCTCTACGTCGATTGCCCGACGATGATGCAATGCTTCTATGGA  208

Query  10468  GGGTCTTTGCCCTACAATTCCACGCACGGCGCGCTCATCACCAATCTTCCACCATACCAG  10527
               |||| |||||||| ||||| | ||| |||||| || ||||||||||||| || ||||||
Sbjct  209    AGGTCGTTGCCCTATAATTCGAGGCATGGCGCGTTCCTCACCAATCTTCCGCCGTACCAG  268

Query  10528  AAAGATGTAAGTCTCGGTGAGGTGTGCAGGGGGCTTAGGCAGGCATCAGGATTCTTTGGA  10587
              || ||||||||| || |||| ||||  || |||||||||||||||||||| ||||| |||
Sbjct  269    AAGGATGTAAGTTTCAGTGAAGTGTCTAGAGGGCTTAGGCAGGCATCAGGTTTCTTCGGA  328

Query  10588  TACGAGGATGTTATCCGGAGCGCCTACTTCGCCGCACTTTCTGTCCCCGGGTACTTCGTC  10647
              |||||||||  |||||||||||| |||||||||||||||||| |||| ||| || ||| |
Sbjct  329    TACGAGGATCCTATCCGGAGCGCTTACTTCGCCGCACTTTCTTTCCCTGGGCACGTCGCC  388

Query  10648  AAGCTGGATGGGCAGATGGAACTAACTTCAACAAAGGGAAAGTCTCTGACCTTCGACCTT  10707
              |||||||||| ||||||||| |||||||| ||||| ||| ||||||||||||||||||| 
Sbjct  389    AAGCTGGATGAGCAGATGGAGCTAACTTCGACAAACGGAGAGTCTCTGACCTTCGACCTC  448

Query  10708  TATGCCAGCAACCAGCTCAGGCTCGAACCTGGTGCGTTGGTGAGGCATGGCGAATGCA  10765
              ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct  449    TATGCCAGCGACCAGCTTAGGCTCGAACCTGGTGCGTGGGTGAGGCATGGCGAATGCA  506


>gi|531050|dbj|D16559.1|TOBNGORF  Nicotiana glauca NgORF13 and NgORF14 gene, complete cds
Length=4398

 Score =  519 bits (262),  Expect = 8e-143
 Identities = 577/674 (85%), Gaps = 16/674 (2%)
 Strand=Plus/Plus

Query  11292  TTCATGATTGTTCAATAATTTCTGTAGCAAATGGAAAACGTTTTACAAACAATGTG-GCC  11350
              ||||||| |||| ||| ||||||||||||||| |||||||||||  |||||||||| |||
Sbjct  537    TTCATGAGTGTTGAATGATTTCTGTAGCAAATAGAAAACGTTTTCAAAACAATGTGCGCC  596

Query  11351  TTGGAGTAATAATCGGAAGAAAAGTTCATAAGTCAGATAATTTGCGTTGCTGACACTAGT  11410
              |||| ||||  | |||| |||| |  |||    |||||||||||||||||||||||| ||
Sbjct  597    TTGGGGTAAACACCGGATGAAACGGCCATGCC-CAGATAATTTGCGTTGCTGACACTCGT  655

Query  11411  GACCAAGCACCTTTAAATACCT-CTGCTTCCCATGCATTTTTCCAAGTT-----AACCTA  11464
               ||| | ||||||||||||||| |||||||| ||||||||| ||| |||     ||||| 
Sbjct  656    AACCCACCACCTTTAAATACCTTCTGCTTCC-ATGCATTTTGCCAGGTTGAACAAACCTT  714

Query  11465  AAGTGGCAGTTGAA-TGGCTCGTTATTTCGGTGGTAGCTCTCAACGGCTTCATGTCGATG  11523
              |||||||||| ||| ||||||||    |||||   ||||||| |||||||||||||||| 
Sbjct  715    AAGTGGCAGTCGAAATGGCTCGTC---TCGGT---AGCTCTCCACGGCTTCATGTCGATA  768

Query  11524  ATTTTCGTTTGATCAAGGAGCCCACTCGACTGAAGGCTCAGCTTGTTAATGTGGTGGAAA  11583
              ||||  ||| ||||||||||||||||||| |||||||||||||| | |||||||||||| 
Sbjct  769    ATTTATGTTGGATCAAGGAGCCCACTCGATTGAAGGCTCAGCTTATGAATGTGGTGGAAG  828

Query  11584  CCTACAAGGCTGCACAAACAGAGACGTTAAAGTACTATATACCATCTGCAACTGAGCGTG  11643
              |||||||| |||||||| ||||||| |||||||||||||||||||||||| |||||| ||
Sbjct  829    CCTACAAGCCTGCACAACCAGAGACATTAAAGTACTATATACCATCTGCAGCTGAGCATG  888

Query  11644  TGGCTCATATGGAGGCAGTCCATGTCAACAATGCAGAAATGGGGCTGCATCCGGCCGGGT  11703
               | ||||| | ||||| | | |||||||| |||| ||||||| ||| |||||||| ||||
Sbjct  889    GGACTCATGTAGAGGCGGCCTATGTCAACGATGCGGAAATGGAGCTTCATCCGGCTGGGT  948

Query  11704  TCAAGTATCCTCTGTCCTTCGTCTTTACCTCCCTGGCCGTGGCTAAAGCCTGCAAGGAGA  11763
              | ||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct  949    TGAAGTATCCTTTGTCTTTCGTCTTTACCTCCCTGGCCGTGGCTAAAGCCTACAAGGAGA  1008

Query  11764  ACAAGCATCTCGTGTGCGAGGAGCATTTGGAGGGAGATCTGATATCGTGCGTCGTTCCTC  11823
               |||||||||| |||||||||| |||| ||| || |||||| || | |||||||||||||
Sbjct  1009   CCAAGCATCTCTTGTGCGAGGAACATTGGGATGGGGATCTGTTAGCCTGCGTCGTTCCTC  1068

Query  11824  CCTATCAGACAAATGTCTCACTCGCTGCTTTAAGGGAGATCCACAATTCCATTTCGGGAG  11883
              | |||||||||||||||||||| |||||||||||||| |  ||||||||| |||||||||
Sbjct  1069   CTTATCAGACAAATGTCTCACTGGCTGCTTTAAGGGAAAGGCACAATTCCTTTTCGGGAG  1128

Query  11884  GAGGGTACCGGAATCCAACAGACATGGATTATTTTGTGGCGATCTTGCCAGATGAAAATT  11943
              ||||||||| | | | |||||||||||||||||||||||| ||| | ||||||||||| |
Sbjct  1129   GAGGGTACCAGGAACAAACAGACATGGATTATTTTGTGGCAATCCTCCCAGATGAAAAAT  1188

Query  11944  TCGACTATCAGAGC  11957
              | | ||||||||||
Sbjct  1189   TTGGCTATCAGAGC  1202


 Score =  315 bits (159),  Expect = 2e-81
 Identities = 449/545 (82%), Gaps = 3/545 (0%)
 Strand=Plus/Plus

Query  13427  ATGGCAGATGAGTTGGAGCGTCAATTGGAAGGCATTTCTCTCGTTACAGTCCTGGGTCCG  13486
              |||| |||||||||| | | |||||| ||||   |||||||||| |||||| ||||||||
Sbjct  2665   ATGGAAGATGAGTTGAATCATCAATTCGAAGCTCTTTCTCTCGTCACAGTCTTGGGTCCG  2724

Query  13487  GATGTGAGGGCCGAGCTTGAGGCGGCGCTACGGGACTACCGCGATGATCTCGACTTCTGG  13546
              ||||||| ||| |||||||||||||||||||  ||||||| ||||||||||||| |||||
Sbjct  2725   GATGTGAAGGCTGAGCTTGAGGCGGCGCTACTTGACTACCACGATGATCTCGACCTCTGG  2784

Query  13547  AAAAGGAACGGTTACGCGGTGGCGGATCTCGATCAATCTGTGACGGTCGACAAGCTTCTT  13606
              |||||   | ||||| |||||  ||| ||||||||  |||||||||||||||||||||||
Sbjct  2785   AAAAGCTGCAGTTACCCGGTGCTGGACCTCGATCAGACTGTGACGGTCGACAAGCTTCTT  2844

Query  13607  TTTATGTATATGGATGAACCAATAGCAGACTTGTGTGTAAAGAATCGCATCCTCGTTTGC  13666
              | |||||||||||||  | ||| |||||| | |||| |   ||  |||  ||||||||||
Sbjct  2845   TATATGTATATGGATCGATCAACAGCAGAGTGGTGTATGTGGAGACGCTGCCTCGTTTGC  2904

Query  13667  AACAG---CAATTCAGTCGCGAAAATTACTTCGCTTCCACCATACCTGCCTGGGGTTACA  13723
              |||||   |||||||  ||| ||| | || ||||| |||||||||||| | || || |||
Sbjct  2905   AACAGTAGCAATTCAACCGCAAAAGTAACCTCGCTGCCACCATACCTGGCAGGCGTGACA  2964

Query  13724  AGGGCCGAGGCGTTTGAGAAACTTAACTCCATTGTTTGTGGAGGTCCTGCATCTGGATCT  13783
              || |||||||||||||||||||| ||||||||||||  ||| ||| ||||| | ||||||
Sbjct  2965   AGCGCCGAGGCGTTTGAGAAACTCAACTCCATTGTTGATGGGGGTGCTGCACCCGGATCT  3024

Query  13784  CTTCAATCTGCTTGTTGCGACTATTTCGTGGCGTTCCTCCCCAGCAATTGTTTTGAGAAG  13843
              ||| |  ||||||||| | ||||||| ||||| ||||| |||   |||||||| ||||||
Sbjct  3025   CTTGAGCCTGCTTGTTACAACTATTTTGTGGCTTTCCTGCCCGAGAATTGTTTCGAGAAG  3084

Query  13844  ACCGGTGAGATATCGGTGCGCACAGTGGACGGCGAGTGTGGCCCCTTCGATGTCTTTACC  13903
              ||||||||| ||||||| |||||||| |||||||||| |   |||||| ||||||| |||
Sbjct  3085   ACCGGTGAGTTATCGGTACGCACAGTTGACGGCGAGTTTATACCCTTCTATGTCTTCACC  3144

Query  13904  CGGCAGCGTCAGCCAGAGGATCAGAGCGATATGTTTTTTAAGTATGAAGAGATTGTATGT  13963
               |||||| ||||||| | |||| ||| || |   ||||||| |||||||| |||||||||
Sbjct  3145   AGGCAGCATCAGCCACAAGATCCGAGTGAAAAAGTTTTTAAATATGAAGAAATTGTATGT  3204

Query  13964  GCTGG  13968
              |||||
Sbjct  3205   GCTGG  3209


 Score =  135 bits (68),  Expect = 4e-27
 Identities = 227/278 (81%), Gaps = 9/278 (3%)
 Strand=Plus/Plus

Query  12480  GAGAGAGCACGCAGATTGTAGCCAAGTTGAGTGACTTGCCGGTAGCACCGAAGCTAAGC-  12538
              ||||||||||| || |||||||||||||||||| |||||||||||| |||||||||||| 
Sbjct  1738   GAGAGAGCACGTAGGTTGTAGCCAAGTTGAGTGGCTTGCCGGTAGCGCCGAAGCTAAGCT  1797

Query  12539  -TCAGGTGTTCCAAATTGACTGGCGTCGAGGTGACGAGCACGACGACCTTGCCGGACAAT  12597
               ||| ||||||||||   |||||||| |||| |||||| ||||      ||||||| | |
Sbjct  1798   GTCAAGTGTTCCAAACAAACTGGCGTTGAGGCGACGAGGACGA------TGCCGGAGATT  1851

Query  12598  GCGGTCGCAGGGGGCTCAAGGCGGGTGGCTTGTAACGGACCTTGTGCTTCTTGTTGTAGC  12657
              |  ||||| | || | ||| |||||||||||||||||||  ||| ||| |||| ||||||
Sbjct  1852   GTAGTCGCTGAGGACGCAAAGCGGGTGGCTTGTAACGGATGTTGAGCTCCTTGCTGTAGC  1911

Query  12658  TTTCGTTGAGCATAACCATTGGGAAGGTTGCTGAACAACGGTAGCGCACCTTTTTCAAGC  12717
              |||  ||||||||| ||||||||  |||| | |||||||||||  ||||||||| |||||
Sbjct  1912   TTT-ATTGAGCATAGCCATTGGGGCGGTTTCAGAACAACGGTAAAGCACCTTTTGCAAGC  1970

Query  12718  GAGGGTGGCAGAAGAACATATTTGCCCGTCGGCAGACG  12755
              ||| | ||  ||||  || |||| ||||||||||||||
Sbjct  1971   GAGCGAGGTGGAAGCGCAGATTTCCCCGTCGGCAGACG  2008


 Score =  133 bits (67),  Expect = 2e-26
 Identities = 109/123 (88%), Gaps = 0/123 (0%)
 Strand=Plus/Plus

Query  11986  AAGGCCTTTGCAAGATTTATAGCAGACAACTGGAGGGGCCCTTAGCTTATGAGGCCATAC  12045
              |||| ||||||||||||||||||||  |||||| |||||| ||||||||||| |||||||
Sbjct  1228   AAGGACTTTGCAAGATTTATAGCAGGGAACTGGGGGGGCCTTTAGCTTATGACGCCATAC  1287

Query  12046  TGGCAATTGGCAAGGTCCTGTTGGAATAGGCAGTGCACCGCTGATCCAACGGGAGTTTCG  12105
              ||||||| |||||||| ||| |||||||  |||||| ||||||| || ||||||||||||
Sbjct  1288   TGGCAATCGGCAAGGTGCTGCTGGAATAAACAGTGCGCCGCTGAACCGACGGGAGTTTCG  1347

Query  12106  ATT  12108
              |||
Sbjct  1348   ATT  1350


 Score =  125 bits (63),  Expect = 4e-24
 Identities = 244/294 (82%), Gaps = 14/294 (4%)
 Strand=Plus/Plus

Query  10837  CTAGAAATATAAATGTAATAAAC-TCATGGATCTGGTT-GATGTAACCTGCGCCATGGAT  10894
              ||||||| || |||||||||||| |||||||||||||| ||||||||||  ||||| |||
Sbjct  68     CTAGAAAAATCAATGTAATAAACATCATGGATCTGGTTTGATGTAACCTATGCCATTGAT  127

Query  10895  GCACTTGTTCTTTTTTGGTTCCGA-TGGATGGGTTGTTTGCTT-GAAATGAAACCTGCCT  10952
              ||| |||| ||||||     |||| || |||||| |||||||| ||||| ||||||||||
Sbjct  128    GCAATTGTCCTTTTT-----CCGACTGAATGGGTCGTTTGCTTTGAAATTAAACCTGCCT  182

Query  10953  GTTCGAAATTTGGTTATCACTTTTTCCATTTATGTTTTT-AATTATTTGTGTATTAAAGA  11011
              ||| || ||||||||||  |||| || || ||||||||| ||||  || ||| |||| ||
Sbjct  183    GTTTGACATTTGGTTATTGCTTTCTCGATCTATGTTTTTTAATTGGTTTTGTCTTAAGGA  242

Query  11012  AAATAGT--TCACATAGCCGCAATATATGACCGAAGCTGGCCCGCAATGCCGCAATAGAT  11069
              |||| ||  ||||||||||||||||||||||| || ||||||| | | |||| |||||||
Sbjct  243    AAATCGTCCTCACATAGCCGCAATATATGACCAAAACTGGCCCAC-ACGCCGTAATAGAT  301

Query  11070  GATTAATTTGTCAAACTTAGCTATCAATATCTCGATAGAAGTGCCCACATGTTT  11123
               || |||||| |||| |||||||||||| |||| | ||||||||| || |||||
Sbjct  302    CATCAATTTGCCAAAATTAGCTATCAATCTCTC-AAAGAAGTGCCGACTTGTTT  354


 Score = 60.0 bits (30),  Expect = 2e-04
 Identities = 51/58 (87%), Gaps = 0/58 (0%)
 Strand=Plus/Plus

Query  11202  AATTCAACATAAAGAAACCAGAAGTCAGAGGAAAGACTTTTAATCCTTGATTATTTGA  11259
              |||||||||||| ||||||| ||||| || | ||||||||||||||  ||||||||||
Sbjct  448    AATTCAACATAAGGAAACCAAAAGTCGGAAGGAAGACTTTTAATCCAGGATTATTTGA  505


 Score = 56.0 bits (28),  Expect = 0.003
 Identities = 100/124 (80%), Gaps = 0/124 (0%)
 Strand=Plus/Plus

Query  13137  TGATTGGCTGAGCTGCGAGACCACCAATAACTTCCACTAATATCGAAAGTGTGGCTGCTT  13196
              ||||| ||||| ||||  |||||| | | ||| ||||||||| || ||||| ||||||||
Sbjct  2401   TGATTTGCTGATCTGCAGGACCACAATTGACTGCCACTAATACCGGAAGTGGGGCTGCTT  2460

Query  13197  TGATTATGATGCTTTGTGAGAGGTTCTCTCCCCAATAAAGTCAAGTTGACAGATTCGGAT  13256
               |||||||||||| || || | |||| || |||| || |  |||| || |||||||||||
Sbjct  2461   CGATTATGATGCTCTGCGATAAGTTCCCTTCCCACTACATGCAAGCTGGCAGATTCGGAT  2520

Query  13257  ACGC  13260
              ||||
Sbjct  2521   ACGC  2524


>gi|11138768|gb|AF281252.1|AF281252  Nicotiana cordifolia Agrobacterium rhizogenes Ri plasmid rolC-like 
sequence.~~
Length=506

 Score =  442 bits (223),  Expect = 1e-119
 Identities = 376/427 (88%), Gaps = 0/427 (0%)
 Strand=Plus/Plus

Query  10339  GAGCGGACCCCCCTGACGGAGCCGGGTGAGGGCCAGTCGATGGATGTTGACGAAGAGGGC  10398
              ||||||| ||||||||| ||||||||||||  ||||||||||||||||||||||||||| 
Sbjct  80     GAGCGGAACCCCCTGACCGAGCCGGGTGAGAACCAGTCGATGGATGTTGACGAAGAGGGT  139

Query  10399  GGTCGCCAAGACCCTGGGATACTGTACCTCTACGTCGATTGCCCGACGATGATGCGATGC  10458
              ||   || |||||||||||||||||||||||| ||||| |||||||||||||||| ||||
Sbjct  140    GGAACCCGAGACCCTGGGATACTGTACCTCTATGTCGACTGCCCGACGATGATGCAATGC  199

Query  10459  TTTTATGGAGGGTCTTTGCCCTACAATTCCACGCACGGCGCGCTCATCACCAATCTTCCA  10518
              || ||||||  ||| |||||||||||||| | ||| ||||||||| ||||||||||||| 
Sbjct  200    TTCTATGGAACGTCGTTGCCCTACAATTCGAGGCATGGCGCGCTCCTCACCAATCTTCCG  259

Query  10519  CCATACCAGAAAGATGTAAGTCTCGGTGAGGTGTGCAGGGGGCTTAGGCAGGCATCAGGA  10578
              |  |||||||| ||||||||| || |||| ||||  || |||||||||||||||||||| 
Sbjct  260    CAGTACCAGAAGGATGTAAGTTTCAGTGAAGTGTCTAGAGGGCTTAGGCAGGCATCAGGT  319

Query  10579  TTCTTTGGATACGAGGATGTTATCCGGAGCGCCTACTTCGCCGCACTTTCTGTCCCCGGG  10638
              ||||| ||||| ||||||  |||||||||||| |||||||||||||||||| |||| |||
Sbjct  320    TTCTTCGGATATGAGGATCCTATCCGGAGCGCTTACTTCGCCGCACTTTCTTTCCCTGGG  379

Query  10639  TACTTCGTCAAGCTGGATGGGCAGATGGAACTAACTTCAACAAAGGGAAAGTCTCTGACC  10698
               || ||| ||||||||||| ||||||||| |||||||| ||||| ||| |||||||||||
Sbjct  380    CACGTCGCCAAGCTGGATGAGCAGATGGAGCTAACTTCGACAAACGGAGAGTCTCTGACC  439

Query  10699  TTCGACCTTTATGCCAGCAACCAGCTCAGGCTCGAACCTGGTGCGTTGGTGAGGCATGGC  10758
              |||||||| ||||||||| ||||| | ||||||||||||||||||| |||||||||||||
Sbjct  440    TTCGACCTCTATGCCAGCGACCAGTTTAGGCTCGAACCTGGTGCGTGGGTGAGGCATGGC  499

Query  10759  GAATGCA  10765
              |||||||
Sbjct  500    GAATGCA  506


>gi|11138760|gb|AF281244.1|AF281244  Nicotiana cordifolia Agrobacterium rhizogenes Ri plasmid ORF13-like 
sequence
Length=595

 Score =  436 bits (220),  Expect = 9e-118
 Identities = 487/568 (85%), Gaps = 6/568 (1%)
 Strand=Plus/Plus

Query  11496  GGTAGCTCTCAACGGCTTCATGTCGATGATTTTCGTTTGATCAAGGAGCCCACTCGACTG  11555
              |||||||||| |||||||||||||||| ||||  ||| |||||||||| |||||||| ||
Sbjct  13     GGTAGCTCTCCACGGCTTCATGTCGATAATTTATGTTGGATCAAGGAGGCCACTCGATTG  72

Query  11556  AAGGCTCAGCTTGTTAATGTGGTGGAAACCTACAAGGCTGCACAAACAGAGACGTTAAAG  11615
              |||||||||||| | |||||||||||| |||||||| |||||||| ||||||| ||||||
Sbjct  73     AAGGCTCAGCTTATGAATGTGGTGGAACCCTACAAGCCTGCACAACCAGAGACATTAAAG  132

Query  11616  TACTATATACCATCTGCAACTGAGCGTGTGGCTCATATGGAGGCAGTCCAT-GTCAACAA  11674
              |||||||||||||||||| |||||| || | ||||| | ||||| | | || |||||| |
Sbjct  133    TACTATATACCATCTGCAGCTGAGCATGGGACTCATGTAGAGGCGGCCTATCGTCAACGA  192

Query  11675  TGCAGAAATGGGGCTGCATCCGGCCG-GGTTCAAGTATCCTCTGTCCTTCGTCTTTACCT  11733
              ||| ||||||| ||| |||||||| | |||| ||||||||| | || |||||||||||||
Sbjct  193    TGCGGAAATGGAGCTTCATCCGGCTGTGGTTGAAGTATCCTTTCTCTTTCGTCTTTACCT  252

Query  11734  CCCTGGCCGTGGCTAAAGCCTGCAAGGAGAACAAGCATCTCGTGTGCGAGGAGCATTTGG  11793
              ||  ||||||||||||||||| |||||||| |||||||||| |||||||||| |||| ||
Sbjct  253    CCTCGGCCGTGGCTAAAGCCTACAAGGAGACCAAGCATCTCTTGTGCGAGGAACATTGGG  312

Query  11794  AGGGAGATCTGATATCGTGCGTCGTTCCTCCCTATCAGACAAATGTCTCACTCGCTGCTT  11853
              | || |||||| || | |||||||||||||| |||||||||||||||||||| |||||||
Sbjct  313    ATGGGGATCTGTTAGCCTGCGTCGTTCCTCCTTATCAGACAAATGTCTCACTGGCTGCTT  372

Query  11854  TAAGGGAGATCCACAATTCCATTTCGGGAGGAGGGTACCGGAATCCAACAGACATGGATT  11913
              ||||||| |||||||||||| |||||||||||||||||| | | | ||||||||||||||
Sbjct  373    TAAGGGAAATCCACAATTCCTTTTCGGGAGGAGGGTACCAGGAACAAACAGACATGGATT  432

Query  11914  ATTTTGTGGCGATCTTGCCA-GATGAAAATTTCGACTATCAGAGCTGTGAAATTGTCACC  11972
              |||||||||| ||| | ||| |||||||| || | ||||||||||   ||||| |  || 
Sbjct  433    ATTTTGTGGCAATCCTCCCATGATGAAAAATTTGGCTATCAGAGCCTCGAAATCGAGACA  492

Query  11973  AAAAATGGCGGCGAAGGCCTTTGCAAGATTTATAGCAGACAACTGGAGGGGCCCTT-AGC  12031
                || ||||||  |||| | ||||||||||||||||||  |||||| |||||| || |||
Sbjct  493    CGAAGTGGCGGTAAAGGAC-TTGCAAGATTTATAGCAGGGAACTGGGGGGGCCTTTAAGC  551

Query  12032  TTATGAG-GCCATACTGGCAATTGGCAA  12058
              ||||||| |||||||||||||| |||||
Sbjct  552    TTATGAGCGCCATACTGGCAATCGGCAA  579


>gi|11138763|gb|AF281247.1|AF281247  Nicotiana otophora Agrobacterium rhizogenes Ri plasmid ORF14-like 
sequence.~~
Length=548

 Score =  341 bits (172),  Expect = 4e-89
 Identities = 453/545 (83%), Gaps = 10/545 (1%)
 Strand=Plus/Plus

Query  13427  ATGGCAGATGAGTTGGAGCGTCAATTGGAAGGCATTTCTCTCGTTACAGTCCTGGGTCCG  13486
              |||| |||||||||| | | |||||| ||||   |||||||||| |||||||||||||||
Sbjct  1      ATGGAAGATGAGTTGAATCATCAATTCGAAGCTCTTTCTCTCGTCACAGTCCTGGGTCCG  60

Query  13487  GATGTGAGGGCCGAGCTTGAGGCGGCGCTACGGGACTACCGCGATGATCTCGACTTCTGG  13546
              ||||||| ||| |||||||||||||||||||  ||||||||||||||||||||| |||||
Sbjct  61     GATGTGAAGGCTGAGCTTGAGGCGGCGCTACTTGACTACCGCGATGATCTCGACCTCTGG  120

Query  13547  AAAAGGAACGGTTACGCGGTGGCGGATCTCGATCAATCTGTGACGGTCGACAAGCTTCTT  13606
              |||||   ||||||| |||||  ||| ||||||||  |||||||||||||||||||||||
Sbjct  121    AAAAGCTGCGGTTACCCGGTGCTGGACCTCGATCAGACTGTGACGGTCGACAAGCTTCTT  180

Query  13607  TTTATGTATATGGATGAACCAATAGCAGACTTGTGTGTAAAGAATCGCATCCTCGTTTGC  13666
                    |||||||||  | ||| |||||||| |||| |   ||  |||  ||||||||||
Sbjct  181    ------TATATGGATCGATCAACAGCAGACTGGTGTATGTGGAGACGCTGCCTCGTTTGC  234

Query  13667  AACAG---CAATTCAGTCGCGAAAATTACTTCGCTTCCACCATACCTGCCTGGGGTTACA  13723
              |||||   ||||||||  || ||| | || ||||| |||||||||||| | || || |||
Sbjct  235    AACAGTAGCAATTCAGCTGCAAAAGTAACCTCGCTGCCACCATACCTGGCAGGCGTGACA  294

Query  13724  AGGGCCGAGGCGTTTGAGAAACTTAACTCCATTGTTTGTGGAGGTCCTGCATCTGGATCT  13783
              || |||||||||||||||||||| ||||||||||||  ||| ||| ||||| | ||||||
Sbjct  295    AGCGCCGAGGCGTTTGAGAAACTCAACTCCATTGTTGATGGGGGTGCTGCACCCGGATCT  354

Query  13784  CTTCAATCTGCTTGTTGCGACTATTTCGTGGCGTTCCTCCCCAGCAATTGTTTTGAGAAG  13843
              ||| |  ||||||||| | ||||||| ||||||||||| ||| |||||||||| ||||||
Sbjct  355    CTTGAGCCTGCTTGTTACAACTATTTTGTGGCGTTCCTGCCCGGCAATTGTTTCGAGAAG  414

Query  13844  ACCGGTGAGATATCGGTGCGCACAGTGGACGGCGAGTGTGGCCCCTTCGATGTCTTTACC  13903
              ||||||||| ||||||| |||||||| ||||||||||||   |||||||||||||| |||
Sbjct  415    ACCGGTGAGTTATCGGTCCGCACAGTTGACGGCGAGTGTATGCCCTTCGATGTCTTCACC  474

Query  13904  CGGCAGCGTCAGCCAGAGGATCAGAGCGATATGTTTTTTAAGTATGAAGAGATTGTATGT  13963
               ||| || ||||||| |||||| ||| || |   ||||||| |||||||| |||||||||
Sbjct  475    AGGCGGCATCAGCCACAGGATCCGAGTGAAAAAGTTTTTAAATATGAAGA-ATTGTATGT  533

Query  13964  GCTGG  13968
              |||||
Sbjct  534    GCTGG  538


>gi|11138761|gb|AF281245.1|AF281245  Nicotiana tomentosiformis Agrobacterium rhizogenes Ri plasmid 
ORF14-like sequence.~~
Length=535

 Score =  311 bits (157),  Expect = 3e-80
 Identities = 391/467 (83%), Gaps = 4/467 (0%)
 Strand=Plus/Plus

Query  13505  GAGGCGGCGCTACGGGACTACCGCGATGATCTCGACTTCTGGAAAAGGAACGGTTACGCG  13564
              |||||||||||||  |||||||||| |||||||||| ||||||||||   ||||||| ||
Sbjct  60     GAGGCGGCGCTACTTGACTACCGCGGTGATCTCGACCTCTGGAAAAGCTGCGGTTACCCG  119

Query  13565  GTGGCGGATCTCGATCAATCTGTGACGGTCGACAAGCTTCTTTTTATGTATATGGATGAA  13624
              |||  ||| ||||||||  |||||||||||||||||||||||| |||||||||||||  |
Sbjct  120    GTGCTGGACCTCGATCAGACTGTGACGGTCGACAAGCTTCTTTATATGTATATGGATCGA  179

Query  13625  CCAATAGCAGACTTGTGTGTAAAGAATCGCATCCTCGTTTGCAACAG---CAATTCAGTC  13681
               ||| |||||||| |||| |   ||  |||  |||||||||||||||   |||||||| |
Sbjct  180    TCAACAGCAGACTGGTGTATGTGGAGACGCTGCCTCGTTTGCAACAGTAGCAATTCAGCC  239

Query  13682  GCGAAAATTACTTCGCTTCCACCATACCTGCCTGGGGTTACAAGGGCCGAGGCGTTTGAG  13741
              || ||| | || ||||| |||||||||||| | || || |||||  ||||||||||||||
Sbjct  240    GCAAAAGTAACCTCGCTGCCACCATACCTGGCAGGCGTGACAAGCACCGAGGCGTTTGAG  299

Query  13742  AAACTTAACTCCATTGTTTGTGGAGGTCCTGCATCTGGATCTCTTCAATCTGCTTGTTGC  13801
              ||||| ||||||||||||  ||| ||| ||||| | ||||||||| |  ||||||||| |
Sbjct  300    AAACTCAACTCCATTGTTGATGGGGGTGCTGCACCCGGATCTCTTGAGCCTGCTTGTTAC  359

Query  13802  GACTATTTCGTGGCGTTCCTCCCCAGCAATTGTTTTGAGAAGACCGGTGAGATATCGGTG  13861
               ||||||| ||||||||||| ||| |||||||||| ||||||||||||||| ||||||| 
Sbjct  360    AACTATTTTGTGGCGTTCCTGCCCGGCAATTGTTTCGAGAAGACCGGTGAGTTATCGGTC  419

Query  13862  CGCACAGTGGACGGCGAGTGTGGCCCCTTCGATGTCTTTACCCGGCAGCGTCAGCCAGAG  13921
              |||||||| ||||||||||||   |||||||||||||| ||| |||||| ||||||| ||
Sbjct  420    CGCACAGTTGACGGCGAGTGTATGCCCTTCGATGTCTTCACCAGGCAGCATCAGCCACAG  479

Query  13922  GATCAGAGCGATATGTTTTTTAAGTATGAAGAGATTGTATGTGCTGG  13968
              |||| ||| || |   ||||||| |||||||| ||||||||||||||
Sbjct  480    GATCCGAGTGAAAAAGTTTTTAAATATGAAGA-ATTGTATGTGCTGG  525


>gi|11138764|gb|AF281248.1|AF281248  Nicotiana cordifolia Agrobacterium rhizogenes Ri plasmid ORF14-like 
sequence.~~
Length=554

 Score =  309 bits (156),  Expect = 1e-79
 Identities = 452/546 (82%), Gaps = 6/546 (1%)
 Strand=Plus/Plus

Query  13427  ATGGCAGATGAGTTGGAGCGTCAATTGGAAGGCATTTCTCTCGTTACAGTCCTGGGTCCG  13486
              |||| |||||||||| | | |||||| ||||   |||||||||| |||||||||||||||
Sbjct  1      ATGGAAGATGAGTTGAATCATCAATTCGAAGCTCTTTCTCTCGTCACAGTCCTGGGTCCG  60

Query  13487  GATGTGAGGGCCGAGCTTGAGGCGGCGCTACGGGACTACCGCGATGATCTCGACTTCTGG  13546
              ||||||| ||| |||||||||||||||||||  ||||||| ||||||||||||| |||||
Sbjct  61     GATGTGAAGGCTGAGCTTGAGGCGGCGCTACTTGACTACCACGATGATCTCGACCTCTGG  120

Query  13547  AAAAGGAACGGTTACGCGGTGGCGGATCTCGATCAATCTGTG-ACGGTCGACAAGCTTCT  13605
              |||||   ||||||| |||||  ||| ||||||||  ||||| |||||||||||||||||
Sbjct  121    AAAAGCTGCGGTTACCCGGTGCTGGACCTCGATCAGACTGTGGACGGTCGACAAGCTTCT  180

Query  13606  TTTTATGTATATGGATGAACCAATAGCAGACTTGTGTGTAAAGAATCGCATCCTCGTTTG  13665
              | | ||||||||||||  | ||| |||||| | |||| |   ||  |||  |||||||||
Sbjct  181    TAT-ATGTATATGGATCGATCAACAGCAGAGTGGTGTATGTGGAGACGCTGCCTCGTTTG  239

Query  13666  CAACAG---CAATTCAGTCGCGAAAATTACTTCGCTTCCACCATACCTGCCTGGGGTTAC  13722
              ||||||   |||||||  ||| ||| | || ||||| |||||||||||| | || || ||
Sbjct  240    CAACAGTAGCAATTCAACCGCAAAAGTAACCTCGCTGCCACCATACCTGGCAGGCGTGAC  299

Query  13723  AAGGGCCGAGGCGTTTGAGAAACTTAACTCCATTGTTTGTGGAGGTCCTGCATCTGGATC  13782
              |||||||||||||||||||||||| ||||||||||||  ||| ||| ||||| | |||||
Sbjct  300    AAGGGCCGAGGCGTTTGAGAAACTCAACTCCATTGTTGATGGGGGTGCTGCACCCGGATC  359

Query  13783  TCTTCAATCTGCTTGTTGCGACTATTTCGTGGCGTTCCTCCCCAGCAATTGTTTTGAGAA  13842
              |||| |  ||||||||| | ||||||| ||||| ||||| ||| |||||||||| ||| |
Sbjct  360    TCTTGAGCCTGCTTGTTACAACTATTTTGTGGCTTTCCTGCCCGGCAATTGTTTCGAG-A  418

Query  13843  GACCGGTGAGATATCGGTGCGCACAGTGGACGGCGAGTGTGGCCCCTTCGATGTCTTTAC  13902
              |||||||||| ||||||| |||||||| |||||||||| |   |||||| ||||||| ||
Sbjct  419    GACCGGTGAGTTATCGGTCCGCACAGTTGACGGCGAGTTTATGCCCTTCTATGTCTTCAC  478

Query  13903  CCGGCAGCGTCAGCCAGAGGATCAGAGCGATATGTTTTTTAAGTATGAAGAGATTGTATG  13962
              | |||||| ||||||| | |||| ||| || |   ||||||| |||||||| ||||||||
Sbjct  479    CAGGCAGCATCAGCCACAAGATCCGAGTGAAAAAGTTTTTAAATATGAAGAAATTGTATG  538

Query  13963  TGCTGG  13968
              ||||||
Sbjct  539    TGCTGG  544


>gi|11138762|gb|AF281246.1|AF281246  Nicotiana tabacum Agrobacterium rhizogenes Ri plasmid ORF13-like 
sequence.~~
Length=529

 Score =  301 bits (152),  Expect = 3e-77
 Identities = 413/498 (82%), Gaps = 4/498 (0%)
 Strand=Plus/Plus

Query  13474  AGTCCTGGGTCCGGATGTGAGGGCCGAGCTTGAGGCGGCGCTACGGGACTACCGCGATGA  13533
              |||||||||||||||||||| ||| |||||||||||||||||||  |||||||||| |||
Sbjct  23     AGTCCTGGGTCCGGATGTGAAGGCTGAGCTTGAGGCGGCGCTACTTGACTACCGCGGTGA  82

Query  13534  TCTCGACTTCTGGAAAAGGAACGGTTACGCGGTGGCGGATCTCGATCAATCTGTGACGGT  13593
              ||||||| ||||||||||   | ||||| |||||  ||| ||||||||  ||||||||||
Sbjct  83     TCTCGACCTCTGGAAAAGCTGCAGTTACCCGGTGCTGGACCTCGATCAGACTGTGACGGT  142

Query  13594  CGACAAGCTTCTTTTTATGTATATGGATGAACCAATAGCAGACTTGTGTGTAAAGAATCG  13653
              |||||||||||||| |||||||||||||  | ||| |||||||| |||| |   ||  ||
Sbjct  143    CGACAAGCTTCTTTATATGTATATGGATCGATCAACAGCAGACTGGTGTATGTGGAGACG  202

Query  13654  CATCCTCGTTTGCAACAG---CAATTCAGTCGCGAAAATTACTTCGCTTCCACCATACCT  13710
              |  |||||||||||||||   |||||||| ||| ||| | || ||||| |||||||||||
Sbjct  203    CTGCCTCGTTTGCAACAGTAGCAATTCAGCCGCAAAAGTAACCTCGCTGCCACCATACCT  262

Query  13711  GCCTGGGGTTACAAGGGCCGAGGCGTTTGAGAAACTTAACTCCATTGTTTGTGGAGGTCC  13770
              | | || || |||||  |||||| |||||||||||| ||||||||||||  ||| ||| |
Sbjct  263    GGCAGGCGTGACAAGCACCGAGGGGTTTGAGAAACTCAACTCCATTGTTGATGGGGGTGC  322

Query  13771  TGCATCTGGATCTCTTCAATCTGCTTGTTGCGACTATTTCGTGGCGTTCCTCCCCAGCAA  13830
              |||| | ||||||||| |  ||||||||| | ||||||| ||||||||||| ||| ||||
Sbjct  323    TGCACCCGGATCTCTTGAGCCTGCTTGTTACAACTATTTTGTGGCGTTCCTGCCCGGCAA  382

Query  13831  TTGTTTTGAGAAGACCGGTGAGATATCGGTGCGCACAGTGGACGGCGAGTGTGGCCCCTT  13890
              |||||| |||||||||| |||| ||||||| | |||||| ||||| |||| |   |||||
Sbjct  383    TTGTTTCGAGAAGACCGTTGAGTTATCGGTCCACACAGTTGACGGGGAGTTTATGCCCTT  442

Query  13891  CGATGTCTTTACCCGGCAGCGTCAGCCAGAGGATCAGAGCGATATGTTTTTTAAGTATGA  13950
              |||||| || ||| |||||| ||||||| |||||| ||| || |   ||||||| |||||
Sbjct  443    CGATGTTTTCACCAGGCAGCATCAGCCACAGGATCCGAGTGAAAAAGTTTTTAAATATGA  502

Query  13951  AGAGATTGTATGTGCTGG  13968
              ||| ||||||||||||||
Sbjct  503    AGA-ATTGTATGTGCTGG  519


>gi|62638137|gb|AY847699.1|  Catharanthus roseus clone CrN12 T-DNA sequence
Length=465

 Score =  170 bits (86),  Expect = 8e-38
 Identities = 239/290 (82%), Gaps = 0/290 (0%)
 Strand=Plus/Plus

Query  10422  GTACCTCTACGTCGATTGCCCGACGATGATGCGATGCTTTTATGGAGGGTCTTTGCCCTA  10481
              ||||||||||||||| ||||||||||||||||  ||||| ||||||||||| ||||| ||
Sbjct  176    GTACCTCTACGTCGACTGCCCGACGATGATGCTCTGCTTCTATGGAGGGTCCTTGCCTTA  235

Query  10482  CAATTCCACGCACGGCGCGCTCATCACCAATCTTCCACCATACCAGAAAGATGTAAGTCT  10541
              |||||  | ||| ||||| ||| ||||||| ||||| || |||||| | ||||| | |||
Sbjct  236    CAATTGGATGCAAGGCGCACTCCTCACCAACCTTCCCCCGTACCAGCATGATGTGACTCT  295

Query  10542  CGGTGAGGTGTGCAGGGGGCTTAGGCAGGCATCAGGATTCTTTGGATACGAGGATGTTAT  10601
              || ||||||    || ||||| ||||| |||||||| || || || |||| ||||  |||
Sbjct  296    CGATGAGGTCAATAGAGGGCTCAGGCAAGCATCAGGTTTTTTCGGTTACGCGGATCCTAT  355

Query  10602  CCGGAGCGCCTACTTCGCCGCACTTTCTGTCCCCGGGTACTTCGTCAAGCTGGATGGGCA  10661
               ||||||||||||||||| ||| ||||| |||| |||    || |||||||| ||| |||
Sbjct  356    GCGGAGCGCCTACTTCGCTGCATTTTCTTTCCCTGGGCGTGTCATCAAGCTGAATGAGCA  415

Query  10662  GATGGAACTAACTTCAACAAAGGGAAAGTCTCTGACCTTCGACCTTTATG  10711
              |||||| |||||||| ||||||||||||| |||||| |||||||| ||||
Sbjct  416    GATGGAGCTAACTTCGACAAAGGGAAAGTGTCTGACATTCGACCTCTATG  465


>gi|62638136|gb|AY847698.1|  Catharanthus roseus clone CrS9 T-DNA sequence
Length=220

 Score =  155 bits (78),  Expect = 5e-33
 Identities = 165/194 (85%), Gaps = 0/194 (0%)
 Strand=Plus/Plus

Query  4457  TGATGGATCTTCCCTATAACCGCCCCCGTTTCCCCCCGTTTGCTATCACCGGTCTACCTA  4516
             ||||||||||||| ||| | ||||| |||||| ||||||||||  |||||  || || ||
Sbjct  24    TGATGGATCTTCCATATCAGCGCCCACGTTTCACCCCGTTTGCCGTCACCCATCCACGTA  83

Query  4517  GTGCGGCCAAACTGAAACGAGCAATTTCTCGGGCCTTTGTCTGCTATGACCAGTTTTGCG  4576
             |||  | ||| ||||| || |||||||||| |||||||||||||||||| ||||| ||||
Sbjct  84    GTGGAGTCAACCTGAACCGTGCAATTTCTCAGGCCTTTGTCTGCTATGATCAGTTCTGCG  143

Query  4577  ATGAACTCCTACAATATCAGCAAAGGTGGACGGATTGGGTGTTCGACCACGGATTTGCAG  4636
             |    ||| | | |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  144   AACGGCTCTTGCGATATCAGCAAAGCTGGACGGATTGGGTGTTCGACCACGGATTTGCAG  203

Query  4637  AAGCCATAGAAGAC  4650
             ||||||| ||||||
Sbjct  204   AAGCCATTGAAGAC  217


>gi|62638135|gb|AY847697.1|  Catharanthus roseus clone CrH9 T-DNA sequence
Length=220

 Score =  155 bits (78),  Expect = 5e-33
 Identities = 165/194 (85%), Gaps = 0/194 (0%)
 Strand=Plus/Plus

Query  4457  TGATGGATCTTCCCTATAACCGCCCCCGTTTCCCCCCGTTTGCTATCACCGGTCTACCTA  4516
             ||||||||||||| ||| | ||||| |||||| ||||||||||  |||||  || || ||
Sbjct  24    TGATGGATCTTCCATATCAGCGCCCACGTTTCACCCCGTTTGCCGTCACCCATCCACGTA  83

Query  4517  GTGCGGCCAAACTGAAACGAGCAATTTCTCGGGCCTTTGTCTGCTATGACCAGTTTTGCG  4576
             |||  | ||| ||||| || |||||||||| |||||||||||||||||| ||||| ||||
Sbjct  84    GTGGAGTCAACCTGAACCGTGCAATTTCTCAGGCCTTTGTCTGCTATGATCAGTTCTGCG  143

Query  4577  ATGAACTCCTACAATATCAGCAAAGGTGGACGGATTGGGTGTTCGACCACGGATTTGCAG  4636
             |    ||| | | |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  144   AACGGCTCTTGCGATATCAGCAAAGCTGGACGGATTGGGTGTTCGACCACGGATTTGCAG  203

Query  4637  AAGCCATAGAAGAC  4650
             ||||||| ||||||
Sbjct  204   AAGCCATTGAAGAC  217


>gi|62638134|gb|AY847696.1|  Catharanthus trichophyllus clone Ct9 T-DNA sequence
Length=220

 Score =  155 bits (78),  Expect = 5e-33
 Identities = 165/194 (85%), Gaps = 0/194 (0%)
 Strand=Plus/Plus

Query  4457  TGATGGATCTTCCCTATAACCGCCCCCGTTTCCCCCCGTTTGCTATCACCGGTCTACCTA  4516
             ||||||||||||| ||| | ||||| |||||| ||||||||||  |||||  || || ||
Sbjct  24    TGATGGATCTTCCATATCAGCGCCCACGTTTCACCCCGTTTGCCGTCACCCATCCACGTA  83

Query  4517  GTGCGGCCAAACTGAAACGAGCAATTTCTCGGGCCTTTGTCTGCTATGACCAGTTTTGCG  4576
             |||  | ||| ||||| || |||||||||| |||||||||||||||||| ||||| ||||
Sbjct  84    GTGGAGTCAACCTGAACCGTGCAATTTCTCAGGCCTTTGTCTGCTATGATCAGTTCTGCG  143

Query  4577  ATGAACTCCTACAATATCAGCAAAGGTGGACGGATTGGGTGTTCGACCACGGATTTGCAG  4636
             |    ||| | | |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  144   AACGGCTCTTGCGATATCAGCAAAGCTGGACGGATTGGGTGTTCGACCACGGATTTGCAG  203

Query  4637  AAGCCATAGAAGAC  4650
             ||||||| ||||||
Sbjct  204   AAGCCATTGAAGAC  217


>gi|11138758|gb|AF281242.1|AF281242  Nicotiana tabacum Agrobacterium rhizogenes Ri plasmid ORF13-like 
sequence
Length=570

 Score =  145 bits (73),  Expect = 5e-30
 Identities = 136/157 (86%), Gaps = 0/157 (0%)
 Strand=Plus/Plus

Query  11811  TGCGTCGTTCCTCCCTATCAGACAAATGTCTCACTCGCTGCTTTAAGGGAGATCCACAAT  11870
              |||| ||||||||| |||||||||||||||||||| |||||||||||||| ||||| || 
Sbjct  328    TGCGACGTTCCTCCTTATCAGACAAATGTCTCACTGGCTGCTTTAAGGGAAATCCATAAC  387

Query  11871  TCCATTTCGGGAGGAGGGTACCGGAATCCAACAGACATGGATTATTTTGTGGCGATCTTG  11930
              |||  ||||||||||||||||| |   |||||||| ||||||||||||||||| ||||| 
Sbjct  388    TCCTGTTCGGGAGGAGGGTACCAGGGACCAACAGATATGGATTATTTTGTGGCTATCTTC  447

Query  11931  CCAGATGAAAATTTCGACTATCAGAGCTGTGAAATTG  11967
              ||| ||||| | ||||||  ||||||||| |||||||
Sbjct  448    CCAAATGAAGAATTCGACCGTCAGAGCTGCGAAATTG  484


 Score =  121 bits (61),  Expect = 7e-23
 Identities = 124/145 (85%), Gaps = 0/145 (0%)
 Strand=Plus/Plus

Query  11495  TGGTAGCTCTCAACGGCTTCATGTCGATGATTTTCGTTTGATCAAGGAGCCCACTCGACT  11554
              |||||||||||||| ||| |||||||||||| |||||| ||||||||| |||  || | |
Sbjct  12     TGGTAGCTCTCAACAGCTCCATGTCGATGATCTTCGTTGGATCAAGGACCCCCTTCAATT  71

Query  11555  GAAGGCTCAGCTTGTTAATGTGGTGGAAACCTACAAGGCTGCACAAACAGAGACGTTAAA  11614
              ||||| | ||||| | |||||||||||  | |||||| |||| |||||||||||||||||
Sbjct  72     GAAGGATGAGCTTCTGAATGTGGTGGAGGCGTACAAGTCTGCGCAAACAGAGACGTTAAA  131

Query  11615  GTACTATATACCATCTGCAACTGAG  11639
              ||||||||| || |||||| |||||
Sbjct  132    GTACTATATGCCGTCTGCAGCTGAG  156


>gi|11138757|gb|AF281241.1|AF281241  Nicotiana tomentosiformis Agrobacterium rhizogenes Ri plasmid 
ORF13-like sequence
Length=571

 Score =  145 bits (73),  Expect = 5e-30
 Identities = 136/157 (86%), Gaps = 0/157 (0%)
 Strand=Plus/Plus

Query  11811  TGCGTCGTTCCTCCCTATCAGACAAATGTCTCACTCGCTGCTTTAAGGGAGATCCACAAT  11870
              |||| ||||||||| |||||||||||||||||||| |||||||||||||| ||||| || 
Sbjct  328    TGCGACGTTCCTCCTTATCAGACAAATGTCTCACTGGCTGCTTTAAGGGAAATCCATAAC  387

Query  11871  TCCATTTCGGGAGGAGGGTACCGGAATCCAACAGACATGGATTATTTTGTGGCGATCTTG  11930
              |||  ||||||||||||||||| |   |||||||| ||||||||||||||||| ||||| 
Sbjct  388    TCCTGTTCGGGAGGAGGGTACCAGGGACCAACAGATATGGATTATTTTGTGGCTATCTTC  447

Query  11931  CCAGATGAAAATTTCGACTATCAGAGCTGTGAAATTG  11967
              ||| ||||| | ||||||  ||||||||| |||||||
Sbjct  448    CCAAATGAAGAATTCGACCGTCAGAGCTGCGAAATTG  484


 Score =  119 bits (60),  Expect = 3e-22
 Identities = 123/144 (85%), Gaps = 0/144 (0%)
 Strand=Plus/Plus

Query  11496  GGTAGCTCTCAACGGCTTCATGTCGATGATTTTCGTTTGATCAAGGAGCCCACTCGACTG  11555
              ||||||||||||| ||| |||||||||||| |||||| ||||||||| |||  || | ||
Sbjct  13     GGTAGCTCTCAACAGCTCCATGTCGATGATCTTCGTTGGATCAAGGACCCCCTTCAATTG  72

Query  11556  AAGGCTCAGCTTGTTAATGTGGTGGAAACCTACAAGGCTGCACAAACAGAGACGTTAAAG  11615
              |||| | ||||| | |||||||||||  | |||||| |||| ||||||||||||||||||
Sbjct  73     AAGGATGAGCTTCTGAATGTGGTGGAGGCGTACAAGTCTGCGCAAACAGAGACGTTAAAG  132

Query  11616  TACTATATACCATCTGCAACTGAG  11639
              |||||||| || |||||| |||||
Sbjct  133    TACTATATGCCGTCTGCAGCTGAG  156


>gi|3021556|emb|AJ005289.1|PTAJ5289  Populus tremula x Populus tremuloides hybrid, transgenic line 
Esch5:35S-rolC-#1, artificial ligation T-DNA sequence/junction 
genomic sequence/left site of the T-DNA
Length=744

 Score =  137 bits (69),  Expect = 1e-27
 Identities = 102/113 (90%), Gaps = 0/113 (0%)
 Strand=Plus/Plus

Query  10659  GCAGATGGAACTAACTTCAACAAAGGGAAAGTCTCTGACCTTCGACCTTTATGCCAGCAA  10718
              ||||||||| |||||||| ||||||||||||| |||||| |||||||| |||||||||| 
Sbjct  4      GCAGATGGAGCTAACTTCGACAAAGGGAAAGTGTCTGACATTCGACCTCTATGCCAGCAC  63

Query  10719  CCAGCTCAGGCTCGAACCTGGTGCGTTGGTGAGGCATGGCGAATGCAAATTTG  10771
              |||||| ||| |||||||||||| |||||||||||||||||| ||||| ||||
Sbjct  64     CCAGCTTAGGTTCGAACCTGGTGAGTTGGTGAGGCATGGCGAGTGCAAGTTTG  116


>gi|3859071|emb|AJ007621.1|NTAJ7621  Nicotiana tabacum torf13-1 gene
Length=691

 Score =  121 bits (61),  Expect = 7e-23
 Identities = 127/149 (85%), Gaps = 0/149 (0%)
 Strand=Plus/Plus

Query  11811  TGCGTCGTTCCTCCCTATCAGACAAATGTCTCACTCGCTGCTTTAAGGGAGATCCACAAT  11870
              |||| ||||||||| |||||||||||||||||||| |||||||||||||| ||||| || 
Sbjct  364    TGCGACGTTCCTCCTTATCAGACAAATGTCTCACTGGCTGCTTTAAGGGAAATCCATAAC  423

Query  11871  TCCATTTCGGGAGGAGGGTACCGGAATCCAACAGACATGGATTATTTTGTGGCGATCTTG  11930
              ||| | | |||||||||||||| |   ||| |||| ||||||||||||||||| ||||| 
Sbjct  424    TCCTTGTTGGGAGGAGGGTACCAGGGACCAGCAGATATGGATTATTTTGTGGCTATCTTC  483

Query  11931  CCAGATGAAAATTTCGACTATCAGAGCTG  11959
              ||| ||||| | ||||||  |||||||||
Sbjct  484    CCAAATGAAGAATTCGACCGTCAGAGCTG  512


 Score =  111 bits (56),  Expect = 6e-20
 Identities = 122/144 (84%), Gaps = 0/144 (0%)
 Strand=Plus/Plus

Query  11496  GGTAGCTCTCAACGGCTTCATGTCGATGATTTTCGTTTGATCAAGGAGCCCACTCGACTG  11555
              ||||| ||||||| ||| |||||||||||| |||||| ||||||||| |||  || | ||
Sbjct  64     GGTAGGTCTCAACAGCTCCATGTCGATGATCTTCGTTGGATCAAGGACCCCCTTCAATTG  123

Query  11556  AAGGCTCAGCTTGTTAATGTGGTGGAAACCTACAAGGCTGCACAAACAGAGACGTTAAAG  11615
              |||| | ||||| | |||||||||||  | |||||| |||| ||||||||||||||||||
Sbjct  124    AAGGATGAGCTTCTGAATGTGGTGGAGGCGTACAAGTCTGCGCAAACAGAGACGTTAAAG  183

Query  11616  TACTATATACCATCTGCAACTGAG  11639
              |||||||| || |||||| |||||
Sbjct  184    TACTATATGCCGTCTGCAGCTGAG  207


 Score = 52.0 bits (26),  Expect = 0.052
 Identities = 29/30 (96%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  12031  CTTATGAGGCCATACTGGCAATTGGCAAGG  12060
              |||||||||||||||||||||| |||||||
Sbjct  587    CTTATGAGGCCATACTGGCAATCGGCAAGG  616


>gi|3859073|emb|AJ007622.1|NTAJ7622  Nicotiana tabacum torf13-2 gene, partial
Length=435

 Score =  109 bits (55),  Expect = 3e-19
 Identities = 103/119 (86%), Gaps = 0/119 (0%)
 Strand=Plus/Plus

Query  11811  TGCGTCGTTCCTCCCTATCAGACAAATGTCTCACTCGCTGCTTTAAGGGAGATCCACAAT  11870
              |||| ||||||||| |||||||||||||||||||| |||||||||||||| ||||| || 
Sbjct  310    TGCGACGTTCCTCCTTATCAGACAAATGTCTCACTGGCTGCTTTAAGGGAAATCCATAAC  369

Query  11871  TCCATTTCGGGAGGAGGGTACCGGAATCCAACAGACATGGATTATTTTGTGGCGATCTT  11929
              |||  ||||||||||||||||| |   ||| |||| |||||||||||| |||| |||||
Sbjct  370    TCCTGTTCGGGAGGAGGGTACCAGGGACCAGCAGATATGGATTATTTTTTGGCTATCTT  428


 Score =  107 bits (54),  Expect = 1e-18
 Identities = 117/138 (84%), Gaps = 0/138 (0%)
 Strand=Plus/Plus

Query  11502  TCTCAACGGCTTCATGTCGATGATTTTCGTTTGATCAAGGAGCCCACTCGACTGAAGGCT  11561
              |||||||||||||||||||||||| |||||| ||||||||| ||| ||  | |  ||| |
Sbjct  1      TCTCAACGGCTTCATGTCGATGATCTTCGTTGGATCAAGGACCCCCCTTCAATTGAGGAT  60

Query  11562  CAGCTTGTTAATGTGGTGGAAACCTACAAGGCTGCACAAACAGAGACGTTAAAGTACTAT  11621
               ||||| | |||||||||||  | |||||| |||| ||||||||||||||||||||||||
Sbjct  61     GAGCTTCTGAATGTGGTGGAGGCGTACAAGTCTGCGCAAACAGAGACGTTAAAGTACTAT  120

Query  11622  ATACCATCTGCAACTGAG  11639
              || || |||||| |||||
Sbjct  121    ATGCCGTCTGCAGCTGAG  138


>gi|450493|emb|X76001.1|ATROL1001  A.thaliana rolA gene (10null1-1)
Length=700

 Score =  101 bits (51),  Expect = 6e-17
 Identities = 82/91 (90%), Gaps = 1/91 (1%)
 Strand=Plus/Plus

Query  7780  GGGACGCTTTGTCGCTGGACCGGAATATTCAGACCTACGGGGTTAATACGCAGTTCTAAA  7839
             ||||| ||||||||| ||||  ||| ||||||||||||||| |||||||||| ||| |||
Sbjct  357   GGGACCCTTTGTCGCCGGACGTGAAAATTCAGACCTACGGGATTAATACGCATTTCGAAA  416

Query  7840  CAAACCTACGGGAATTAATACGCACGTGGCT  7870
             |||||||||||| ||||||||||||||||||
Sbjct  417   CAAACCTACGGG-ATTAATACGCACGTGGCT  446


 Score = 52.0 bits (26),  Expect = 0.052
 Identities = 47/54 (87%), Gaps = 0/54 (0%)
 Strand=Plus/Plus

Query  7539  TCAGGATGGAACTAGCCGGAATAAACGTTGTCGGAATGGCCCAGACCTTTGGAG  7592
             |||| |||||| |||||||| ||||||| | ||| |||||||||||||| ||||
Sbjct  126   TCAGAATGGAATTAGCCGGACTAAACGTCGCCGGCATGGCCCAGACCTTCGGAG  179


>gi|11138759|gb|AF281243.1|AF281243  Nicotiana otophora Agrobacterium rhizogenes Ri plasmid ORF13-like 
sequence
Length=573

 Score = 60.0 bits (30),  Expect = 2e-04
 Identities = 60/70 (85%), Gaps = 0/70 (0%)
 Strand=Plus/Plus

Query  11898  CCAACAGACATGGATTATTTTGTGGCGATCTTGCCAGATGAAAATTTCGACTATCAGAGC  11957
              |||||||| ||||||||||||||||| ||||| ||| ||||| | ||||||  ||||| |
Sbjct  417    CCAACAGATATGGATTATTTTGTGGCTATCTTCCCAAATGAAGAATTCGACCGTCAGACC  476

Query  11958  TGTGAAATTG  11967
              || |||||||
Sbjct  477    TGCGAAATTG  486


>gi|3947717|emb|AJ010794.1|NTA010794  Nicotiana tabacum trolC-torf13 intergenic region
Length=912

 Score = 60.0 bits (30),  Expect = 2e-04
 Identities = 72/86 (83%), Gaps = 0/86 (0%)
 Strand=Plus/Plus

Query  11496  GGTAGCTCTCAACGGCTTCATGTCGATGATTTTCGTTTGATCAAGGAGCCCACTCGACTG  11555
              ||||| ||||||| ||| |||||||||||| |||||| ||||||||| |||  || | ||
Sbjct  826    GGTAGGTCTCAACAGCTCCATGTCGATGATCTTCGTTGGATCAAGGACCCCCTTCAATTG  885

Query  11556  AAGGCTCAGCTTGTTAATGTGGTGGA  11581
              |||| | ||||| | |||||||||||
Sbjct  886    AAGGATGAGCTTCTGAATGTGGTGGA  911


 Score = 50.1 bits (25),  Expect = 0.20
 Identities = 40/45 (88%), Gaps = 0/45 (0%)
 Strand=Plus/Plus

Query  10727  GGCTCGAACCTGGTGCGTTGGTGAGGCATGGCGAATGCAAATTTG  10771
              ||||||||||||| | | |||||||||||||||| ||||| ||||
Sbjct  65     GGCTCGAACCTGGGGAGCTGGTGAGGCATGGCGAGTGCAAGTTTG  109


>gi|71833943|emb|BX664703.21|  Zebrafish DNA sequence from clone DKEYP-74A8 in linkage group 
6, complete sequence
Length=193958

 Score = 54.0 bits (27),  Expect = 0.013
 Identities = 30/31 (96%), Gaps = 0/31 (0%)
 Strand=Plus/Plus

Query  9554   TACAAATAATTTATTTCAATTACGCAATTAC  9584
              |||||||||||||||||||||| ||||||||
Sbjct  83971  TACAAATAATTTATTTCAATTATGCAATTAC  84001


>gi|34366541|emb|AL929512.14|  Zebrafish DNA sequence from clone CH211-1L10, complete sequence
Length=197232

 Score = 54.0 bits (27),  Expect = 0.013
 Identities = 30/31 (96%), Gaps = 0/31 (0%)
 Strand=Plus/Minus

Query  9554    TACAAATAATTTATTTCAATTACGCAATTAC  9584
               |||||||||||||||||||||| ||||||||
Sbjct  149776  TACAAATAATTTATTTCAATTATGCAATTAC  149746


>gi|15982218|emb|AJ311874.1|CVE311874  Cloning vector pHELLSGATE
Length=18691

 Score = 54.0 bits (27),  Expect = 0.013
 Identities = 27/27 (100%), Gaps = 0/27 (0%)
 Strand=Plus/Minus

Query  536   GGTGGCAGGATATATTGTGGTGTAAAC  562
             |||||||||||||||||||||||||||
Sbjct  2294  GGTGGCAGGATATATTGTGGTGTAAAC  2268


>gi|33320493|gb|AF489904.1|  Cloning vector pHellsgate 8, complete sequence
Length=17485

 Score = 54.0 bits (27),  Expect = 0.013
 Identities = 27/27 (100%), Gaps = 0/27 (0%)
 Strand=Plus/Minus

Query  536   GGTGGCAGGATATATTGTGGTGTAAAC  562
             |||||||||||||||||||||||||||
Sbjct  2294  GGTGGCAGGATATATTGTGGTGTAAAC  2268


>gi|62084031|emb|CR376751.15|  Zebrafish DNA sequence from clone CH211-220M6 in linkage group 
8, complete sequence
Length=229078

 Score = 52.0 bits (26),  Expect = 0.052
 Identities = 26/26 (100%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  14165  AAAATACAAACATAATACAAACATAA  14190
              ||||||||||||||||||||||||||
Sbjct  28087  AAAATACAAACATAATACAAACATAA  28112


>gi|62084020|emb|CR847797.8|  Zebrafish DNA sequence from clone DKEY-281F2 in linkage group 
8, complete sequence
Length=219913

 Score = 52.0 bits (26),  Expect = 0.052
 Identities = 26/26 (100%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  14165  AAAATACAAACATAATACAAACATAA  14190
              ||||||||||||||||||||||||||
Sbjct  35507  AAAATACAAACATAATACAAACATAA  35532


>gi|41351569|gb|AC110219.11|  Mus musculus chromosome 1, clone RP24-541P18, complete sequence
Length=193614

 Score = 50.1 bits (25),  Expect = 0.20
 Identities = 25/25 (100%), Gaps = 0/25 (0%)
 Strand=Plus/Plus

Query  14173  AACATAATACAAACATAATACAAAC  14197
              |||||||||||||||||||||||||
Sbjct  93055  AACATAATACAAACATAATACAAAC  93079


>gi|11138766|gb|AF281250.1|AF281250  Nicotiana otophora Agrobacterium rhizogenes Ri plasmid rolC-like 
sequence.~~
Length=507

 Score = 50.1 bits (25),  Expect = 0.20
 Identities = 31/33 (93%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  10727  GGCTCGAACCTGGTGCGTTGGTGAGGCATGGCG  10759
              ||||||||||||| | |||||||||||||||||
Sbjct  469    GGCTCGAACCTGGGGAGTTGGTGAGGCATGGCG  501


>gi|11138765|gb|AF281249.1|AF281249  Nicotiana tomentosiformis Agrobacterium rhizogenes Ri plasmid 
rolC-like sequence.~~
Length=506

 Score = 50.1 bits (25),  Expect = 0.20
 Identities = 31/33 (93%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  10727  GGCTCGAACCTGGTGCGTTGGTGAGGCATGGCG  10759
              ||||||||||||||| | |||||||||||||||
Sbjct  472    GGCTCGAACCTGGTGAGCTGGTGAGGCATGGCG  504


>gi|1150515|emb|X91881.1|NTTROLCGN  N.tabacum trolC gene
Length=804

 Score = 50.1 bits (25),  Expect = 0.20
 Identities = 40/45 (88%), Gaps = 0/45 (0%)
 Strand=Plus/Plus

Query  10727  GGCTCGAACCTGGTGCGTTGGTGAGGCATGGCGAATGCAAATTTG  10771
              ||||||||||||| | | |||||||||||||||| ||||| ||||
Sbjct  653    GGCTCGAACCTGGGGAGCTGGTGAGGCATGGCGAGTGCAAGTTTG  697


>gi|29466492|emb|AL928826.9|  Mouse DNA sequence from clone RP23-456N9 on chromosome 2, complete 
sequence
Length=180533

 Score = 50.1 bits (25),  Expect = 0.20
 Identities = 28/29 (96%), Gaps = 0/29 (0%)
 Strand=Plus/Minus

Query  669     AATTTTTATTTAAGATATTAAAATAATAA  697
               |||||||||||||||| ||||||||||||
Sbjct  100258  AATTTTTATTTAAGATGTTAAAATAATAA  100230


>gi|53378868|gb|AC137068.4|  Mus musculus BAC clone RP23-283C17 from 3, complete sequence
Length=176440

 Score = 50.1 bits (25),  Expect = 0.20
 Identities = 25/25 (100%), Gaps = 0/25 (0%)
 Strand=Plus/Minus

Query  8814   GGGGATGATAACATACTTTGTTTTT  8838
              |||||||||||||||||||||||||
Sbjct  21960  GGGGATGATAACATACTTTGTTTTT  21936


>gi|49406002|gb|AC146852.15|  Medicago truncatula clone mth2-58k21, complete sequence
Length=145314

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 24/24 (100%), Gaps = 0/24 (0%)
 Strand=Plus/Plus

Query  1406    AATTAAATAAAGTATATAAAATAT  1429
               ||||||||||||||||||||||||
Sbjct  139785  AATTAAATAAAGTATATAAAATAT  139808


>gi|35187402|gb|AY395747.1|  Helisoma trivolvis type 7 serotonin receptor mRNA, complete cds
Length=4363

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 27/28 (96%), Gaps = 0/28 (0%)
 Strand=Plus/Minus

Query  14164  GAAAATACAAACATAATACAAACATAAT  14191
              ||||| ||||||||||||||||||||||
Sbjct  3465   GAAAAAACAAACATAATACAAACATAAT  3438


>gi|34099039|gb|AC102643.9|  Mus musculus chromosome 8, clone RP23-304B22, complete sequence
Length=210037

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 24/24 (100%), Gaps = 0/24 (0%)
 Strand=Plus/Minus

Query  784   CAAATTATATAAATAGGAAATACA  807
             ||||||||||||||||||||||||
Sbjct  2395  CAAATTATATAAATAGGAAATACA  2372


>gi|23497540|gb|AE014824.1|  Plasmodium falciparum 3D7 chromosome 14 section 9 of 13 of the 
complete sequence
Length=250022

 Features in this part of subject sequence:
   RNA binding protein, putative

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 24/24 (100%), Gaps = 0/24 (0%)
 Strand=Plus/Plus

Query  711     TTTAAATAATAAAGGTGAAAATTT  734
               ||||||||||||||||||||||||
Sbjct  206434  TTTAAATAATAAAGGTGAAAATTT  206457


>gi|71533304|gb|AC162519.4|  Mus musculus chromosome 8, clone RP24-146M21, complete sequence
Length=150115

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 24/24 (100%), Gaps = 0/24 (0%)
 Strand=Plus/Plus

Query  784    CAAATTATATAAATAGGAAATACA  807
              ||||||||||||||||||||||||
Sbjct  61985  CAAATTATATAAATAGGAAATACA  62008


>gi|61674134|emb|CR933104.2|  Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE
Length=117135

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 24/24 (100%), Gaps = 0/24 (0%)
 Strand=Plus/Minus

Query  1406    AATTAAATAAAGTATATAAAATAT  1429
               ||||||||||||||||||||||||
Sbjct  106862  AATTAAATAAAGTATATAAAATAT  106839


>gi|22859037|emb|AL669941.12|  Mouse DNA sequence from clone RP23-288B4 on chromosome 11 no 
genes, complete sequence
Length=216199

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 30/32 (93%), Gaps = 0/32 (0%)
 Strand=Plus/Plus

Query  13404   ACTAATCCTGCTAAAGCATGAGCATGGCAGAT  13435
               ||||||||||||||  ||||||||||||||||
Sbjct  102010  ACTAATCCTGCTAATCCATGAGCATGGCAGAT  102041


>gi|20128753|gb|AC104830.4|  Homo sapiens BAC clone RP11-811O14 from 2, complete sequence
Length=67709

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 24/24 (100%), Gaps = 0/24 (0%)
 Strand=Plus/Minus

Query  11333  TTTACAAACAATGTGGCCTTGGAG  11356
              ||||||||||||||||||||||||
Sbjct  43317  TTTACAAACAATGTGGCCTTGGAG  43294


>gi|27476189|gb|AC122281.2|  Mus musculus chromosome 16 clone RP23-239I17, complete sequence
Length=204608

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 27/28 (96%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  14167   AATACAAACATAATACAAACATAATACA  14194
               |||||| |||||||||||||||||||||
Sbjct  129418  AATACATACATAATACAAACATAATACA  129445


>gi|8051651|dbj|AP002043.1|  Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJI6
Length=83912

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15520  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15555
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15528  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15563
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15536  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15571
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15544  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15579
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15552  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15587
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15560  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15595
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15568  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15603
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15576  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15611
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15584  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15619
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15592  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15627
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15600  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15635
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15608  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15643
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15616  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15651
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 33/36 (91%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  15624  GTTCGTCAGTTCGTCAGTTCGTCAGTTCGTCAGTTC  15659
              ||||||||||| |||||||| ||||| |||||||||
Sbjct  68276  GTTCGTCAGTTTGTCAGTTCATCAGTCCGTCAGTTC  68311


>gi|51854654|gb|AC150034.2|  Mus musculus BAC clone RP23-428H16 from 16, complete sequence
Length=187989

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 27/28 (96%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  14167  AATACAAACATAATACAAACATAATACA  14194
              |||||| |||||||||||||||||||||
Sbjct  2151   AATACATACATAATACAAACATAATACA  2178


>gi|25004499|emb|AL732633.6|  Mouse DNA sequence from clone RP23-320E20 on chromosome 11, complete 
sequence
Length=99697

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 24/24 (100%), Gaps = 0/24 (0%)
 Strand=Plus/Plus

Query  7509   TCTATTTTGCTAACAGCACTTCTT  7532
              ||||||||||||||||||||||||
Sbjct  48304  TCTATTTTGCTAACAGCACTTCTT  48327


>gi|167288|gb|M13196.1|COARIPJ  C.arvensis RI plasmid TL-DNA/plant junction
Length=444

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 27/28 (96%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  535  GGGTGGCAGGATATATTGTGGTGTAAAC  562
            |||||||||||||||||||| |||||||
Sbjct  76   GGGTGGCAGGATATATTGTGATGTAAAC  103


>gi|167287|gb|K03280.1|COARIINT  C.arvensis DNA, 5' flank of Ri plasmid insertion
Length=570

 Score = 48.1 bits (24),  Expect = 0.81
 Identities = 27/28 (96%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  535  GGGTGGCAGGATATATTGTGGTGTAAAC  562
            |||||||||||||||||||| |||||||
Sbjct  517  GGGTGGCAGGATATATTGTGATGTAAAC  544


>gi|56404039|gb|AC149530.2|  Xenopus tropicalis clone ISB-301B24, complete sequence
Length=87416

 Score = 46.1 bits (23),  Expect = 3.2
 Identities = 26/27 (96%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  772    GCACTTATTTTCCAAATTATATAAATA  798
              |||||||||||| ||||||||||||||
Sbjct  37012  GCACTTATTTTCTAAATTATATAAATA  37038


>gi|51870865|gb|AC138741.7|  Mus musculus chromosome 1, clone RP24-260D21, complete sequence
Length=161846

 Score = 46.1 bits (23),  Expect = 3.2
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  683     ATATTAAAATAATAATAATATCC  705
               |||||||||||||||||||||||
Sbjct  102659  ATATTAAAATAATAATAATATCC  102637






  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 14, 2006  9:13 PM
  Number of letters in database: 2,022,667,308
  Number of sequences in database:  2,973,143
Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 2973143
Number of Hits to DB: 15786523
Number of extensions: 6658675
Number of successful extensions: 37608
Number of sequences better than 10: 5
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 37600
Number of HSP's successfully gapped: 17
Length of query: 16110
Length of database: 14907569196
Length adjustment: 25
Effective length of query: 16085
Effective length of database: 14907569196
Effective search space: 239788250517660
Effective search space used: 238592675388785
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
S2: 23 (46.1 bits)