BLASTP 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1143895921-22931-57052379280.BLASTQ1


Database: Non-redundant SwissProt sequences
           195,650 sequences; 73,396,406 total letters
 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports


Query=  
Length=152

                                                                   Score     E
Sequences producing significant alignments:                        (Bits)  Value

gi|1345695|sp|P47755|CAZA2_HUMAN  F-actin capping protein alpha-2   127    2e-30  
gi|1705650|sp|P52907|CAZA1_HUMAN  F-actin capping protein alpha-1   123    3e-29  
gi|20137887|sp|Q96KX2|CAZA3_HUMAN  F-actin capping protein alp...  47.0    3e-06  
gi|48428689|sp|Q9P2J5|SYLC_HUMAN  Leucyl-tRNA synthetase, cyto...  26.9    3.1    
gi|1705489|sp|P51813|BMX_HUMAN  Cytoplasmic tyrosine-protein k...  26.2    5.3    
gi|1346640|sp|P35580|MYH10_HUMAN  Myosin-10 (Myosin heavy chai...  25.8    6.9    

Alignments

>gi|1345695|sp|P47755|CAZA2_HUMAN  F-actin capping protein alpha-2 subunit (CapZ alpha-2)
Length=286

 Score =  127 bits (319),  Expect = 2e-30
 Identities = 72/117 (61%), Positives = 72/117 (61%), Gaps = 45/117 (38%)

Query  81   NGRWRSEWKFTITPSTTQVVGILKIQ----------------------------------  106
            NGRWRSEWKFTITPSTTQVVGILKIQ                                  
Sbjct  170  NGRWRSEWKFTITPSTTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFI  229

Query  107  -----------TAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEMQNA  152
                       TAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEMQNA
Sbjct  230  KIVEAAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEMQNA  286


 Score =  119 bits (297),  Expect = 6e-28
 Identities = 74/75 (98%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFXXXXXXXXXXXXXXEGAAHAFAQYNLD  60
           MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLD
Sbjct  1   MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLD  60

Query  61  QFTPVKIEGYEDQLL  75
           QFTPVKIEGYEDQ+L
Sbjct  61  QFTPVKIEGYEDQVL  75


>gi|1705650|sp|P52907|CAZA1_HUMAN  F-actin capping protein alpha-1 subunit (CapZ alpha-1)
Length=286

 Score =  123 bits (308),  Expect = 3e-29
 Identities = 69/117 (58%), Positives = 70/117 (59%), Gaps = 45/117 (38%)

Query  81   NGRWRSEWKFTITPSTTQVVGILKIQ----------------------------------  106
            NGRWRSEWKFTITP T QVVG+LKIQ                                  
Sbjct  170  NGRWRSEWKFTITPPTAQVVGVLKIQVHYYEDGNVQLVSHKDVQDSLTVSNEAQTAKEFI  229

Query  107  -----------TAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEMQNA  152
                       TAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEMQNA
Sbjct  230  KIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEMQNA  286


 Score =  109 bits (273),  Expect = 4e-25
 Identities = 67/75 (89%), Positives = 73/75 (97%), Gaps = 0/75 (0%)

Query  1   MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFXXXXXXXXXXXXXXEGAAHAFAQYNLD  60
           MAD ++++SDEEKVRIAAKFI HAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYN+D
Sbjct  1   MADFDDRVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMD  60

Query  61  QFTPVKIEGYEDQLL  75
           QFTPVKIEGYEDQ+L
Sbjct  61  QFTPVKIEGYEDQVL  75


>gi|20137887|sp|Q96KX2|CAZA3_HUMAN  F-actin capping protein alpha-3 subunit (CapZ alpha-3) (CP-alpha-3) 
(Germ cell-specific protein 3)
Length=299

 Score = 47.0 bits (110),  Expect = 3e-06
 Identities = 33/108 (30%), Positives = 42/108 (38%), Gaps = 46/108 (42%)

Query  81   NGRWRSEWKFTITPSTTQVVGIL-------------------------------------  103
            NG W+S+W F + P  TQV G +                                     
Sbjct  167  NGLWKSKWIFQVNPFLTQVTGRIFVQAHFFRCVNLHIEISKDLKESLEIVNQAQLALSFA  226

Query  104  --------KIQTAISENYQTMSDTTF-KALRRQLPVTRTKIDWNKILS  142
                    K Q A+ E  Q +S+    K LRR LPVTRT IDW++ILS
Sbjct  227  RLVEEQENKFQAAVLEELQELSNEALRKILRRDLPVTRTLIDWHRILS  274


 Score = 28.5 bits (62),  Expect = 1.1
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 0/26 (0%)

Query  8   LSDEEKVRIAAKFIIHAPPGEFNEVF  33
           LS ++K R+  + ++ APPGEF   F
Sbjct  6   LSRKDKERVIRRLLLQAPPGEFVNAF  31


>gi|48428689|sp|Q9P2J5|SYLC_HUMAN  Leucyl-tRNA synthetase, cytoplasmic (Leucine--tRNA ligase) (LeuRS)
Length=1176

 Score = 26.9 bits (58),  Expect = 3.1
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 0/38 (0%)

Query  109  ISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIG  146
            +++NY     TT   LR+       K+  NK+++ ++G
Sbjct  940  VAKNYPPWQHTTLSVLRKHFEANNGKLPDNKVIASELG  977


>gi|1705489|sp|P51813|BMX_HUMAN  Cytoplasmic tyrosine-protein kinase BMX (Bone marrow tyrosine 
kinase gene in chromosome X protein) (Epithelial and endothelial 
tyrosine kinase) (ETK) (NTK38)
Length=675

 Score = 26.2 bits (56),  Expect = 5.3
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 5/36 (13%)

Query  58   NLDQFTPVKIEG-----YEDQLLFLFLRNGRWRSEW  88
            NL++ TPV+ +      Y+D LL+++  N   RS+W
Sbjct  67   NLEEQTPVERQYPFQIVYKDGLLYVYASNEESRSQW  102


>gi|1346640|sp|P35580|MYH10_HUMAN  Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin 
heavy chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin 
heavy chain, type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B)
Length=1976

 Score = 25.8 bits (55),  Expect = 6.9
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 0/33 (0%)

Query  1     MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVF  33
             +  LEEQL  E K R AA  ++     +  E+F
Sbjct  1823  IGQLEEQLEQEAKERAAANKLVRRTEKKLKEIF  1855






  Database: Non-redundant SwissProt sequences
    Posted date:  Mar 28, 2006  2:14 AM
  Number of letters in database: 7,471,329
  Number of sequences in database:  13,755
Lambda     K      H
   0.319    0.133    0.390 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13755
Number of Hits to DB: 154069
Number of extensions: 5090
Number of successful extensions: 6
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 0
Length of query: 152
Length of database: 7471329
Length adjustment: 88
Effective length of query: 64
Effective length of database: 7471329
Effective search space: 478165056
Effective search space used: 400696896
T: 11
A: 40
X1: 16 (7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 54 (25.4 bits)







 


 
Format
  


 


 
Show
  Graphical OverviewLinkoutSequence RetrievalNCBI-giAlignmentPSSMBioseq in HTMLPlain textASN.1XMLformat


 


 

  CDS feature


 


 

  Masking CharacterX for protein, n for nucleotideLower Case
Masking ColorBlackGreyRed



 


 
Number of:
  Descriptions01050100250500
Alignments01050100250500



 


 
Alignment view
  PairwisePairwise with identitiesquery-anchored with identitiesquery-anchored without identitiesflat query-anchored with identitiesflat query-anchored without identitiesHit Table


 


 
Format for PSI-BLAST
  with inclusion threshold:


 


 
Limit results by entrez query
   or select from:All organismsViruses [ORGN]Archaea [ORGN]Bacteria [ORGN]Eukaryota [ORGN]Viridiplantae [ORGN]Fungi [ORGN]Metazoa [ORGN]Arthropoda [ORGN]Vertebrata [ORGN]Mammalia [ORGN]Rodentia [ORGN]Primates [ORGN]-------------------Aeropyrum pernix [ORGN]Aquifex aeolicus [ORGN]Arabidopsis thaliana [ORGN]Bacillus subtilis [ORGN]Bos taurus [ORGN]Caenorhabditis elegans [ORGN]Canis familiaris[ORGN]Danio rerio [ORGN]Dictyostelium discoideum [ORGN]Drosophila melanogaster [ORGN]Escherichia coli [ORGN]Gallus gallus [ORGN]Homo sapiens [ORGN]Human immunodeficiency virus type 1 [ORGN]Methanococcus jannaschii [ORGN]Mus musculus [ORGN]Oryctolagus cuniculus [ORGN]Oryza sativa [ORGN]Ovis aries [ORGN]Plasmodium falciparum [ORGN]Rattus norvegicus [ORGN]Saccharomyces cerevisiae [ORGN]Schizosaccharomyces pombe [ORGN]Xenopus tropicalis[ORGN]Simian immunodeficiency virus [ORGN]Sus scrofa[ORGN]Synechocystis PCC6803 [ORGN]Takifugu rubripes [ORGN]Xenopus laevis [ORGN]Zea mays [ORGN]


 


 
Expect value range:
    







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