Header of the page

*BLASTP 2.2.10 [Oct-19-2004]*

*Reference <http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Retrieve&list_uids=9254694&dopt=Citation>:*
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1111081466-13333-76278938459.BLASTQ2

*Query=* hg16_dna|GENSCAN_predicted_peptide_2|90_aa (90 letters)

*Database:* Non-redundant SwissProt sequences 164,271 sequences;
60,490,055 total letters

If you have any problems or questions with the results of this search
please refer to the *BLAST FAQs
<http://www.ncbi.nlm.nih.gov/blast/blast_FAQs.html>*

*No significant similarity found.* For reasons why, *click here*
<http://www.ncbi.nlm.nih.gov/blast/blast_FAQs.html#no%20hits>*.*



  Database: Non-redundant SwissProt sequences
    Posted date:  Mar 15, 2005 10:11 AM
  Number of letters in database: 60,490,055
  Number of sequences in database:  164,271
  
Lambda     K      H
   0.327    0.138    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 337,389
Number of Sequences: 164271
Number of extensions: 8060
Number of successful extensions: 8
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 0
length of query: 90
length of database: 6,424,444
effective HSP length: 62
effective length of query: 28
effective length of database: 5,686,334
effective search space: 159217352
effective search space used: 159217352
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 51 (24.3 bits)


------------------------------------------------------------------------
	
	  	
	  	*Format* 	  
	  	
	  	Show 	  Graphical Overview
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#show_overview>Linkout
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#show_linkout>Sequence
Retrieval
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#get_sequence>NCBI-gi
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#ncbi_gi> in
format
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#format_object>
	  	
	  	Use new formatter 	  Masking Character
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#mask_characater>
Masking Color
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#mask_color>
	  	
	  	Number of: 	  Descriptions
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#descriptions>
Alignments
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#alignments>
	  	
	  	Alignment view
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#alignment_view>
	  
	  	
	  	Format for PSI-BLAST
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#psiblast>
  with inclusion threshold:
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#inclusion>
	  	
	  	Limit results by entrez query
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#entrez_query> 	  
or select from:
	  	
	  	Expect value range:
<http://www.ncbi.nlm.nih.gov/blast/html/blastcgihelp.html#expect> 	  
	



Format button <javascript:document.forms[9].submit();> or Reset form button <javascript:document.forms[0].reset();>