BLASTP 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1111080438-26659-175056342260.BLASTQ4 Query= hg16_dna|GENSCAN_predicted_peptide_1|129_aa (129 letters) Database: Non-redundant SwissProt sequences 164,271 sequences; 60,490,055 total letters Score E Sequences producing significant alignments: (bits) Value gi|45477126|sp|Q86X10|KC19_HUMAN Protein KIAA1219 27 2.5 gi|1174412|sp|P02549|SPCA_HUMAN Spectrin alpha chain, erythrocyt... 26 3.2 gi|1708117|sp|P01914|HB2C_HUMAN HLA class II histocompatibility ... 26 4.2 gi|34395493|sp|Q30167|2B1A_HUMAN HLA class II histocompatibility... 26 4.2 gi|59797889|sp|Q9H2F5|EPC1_HUMAN Enhancer of polycomb homolog 1 25 5.5 gi|1708072|sp|P49915|GUAA_HUMAN GMP synthase [glutamine-hydrolyz... 25 5.5 gi|122252|sp|P01911|HB2G_HUMAN HLA class II histocompatibility a... 25 7.2 gi|20981706|sp|P17812|PYRG_HUMAN CTP synthase (UTP--ammonia liga... 25 9.3 gi|26006802|sp|Q8NCM2|KCNH5_HUMAN Potassium voltage-gated channe... 25 9.3 gi|4033376|sp|Q14524|SCN5A_HUMAN Sodium channel protein type V a... 25 9.3 ALIGNMENTS >gi|45477126|sp|Q86X10|KC19_HUMAN Protein KIAA1219 Length = 1494 Score = 26.6 bits (57), Expect = 2.5 Identities = 13/38 (34%), Positives = 19/38 (50%) Query: 6 QWEDDVSTELQKITAAPMLTLVPIQADAMERGRAAASV 43 QW D+S L + L V + D+ +R RA +SV Sbjct: 773 QWRQDMSISLAALELLSGLAKVKVMVDSGDRKRAISSV 810 >gi|1174412|sp|P02549|SPCA_HUMAN Spectrin alpha chain, erythrocyte (Erythroid alpha-spectrin) Length = 2418 Score = 26.2 bits (56), Expect = 3.2 Identities = 12/39 (30%), Positives = 22/39 (56%) Query: 75 KKKEENVDHGLAASLGQQLYAVEKDHDFFIAQIAVPAAD 113 +K EEN+ + ++ ++KDH+ F+A +A AD Sbjct: 2059 EKMEENLSEPVHCVSLNEIRQLQKDHEDFLASLARAQAD 2097 >gi|1708117|sp|P01914|HB2C_HUMAN HLA class II histocompatibility antigen, DR-1 beta chain precursor (Clone P2-beta-4) Length = 266 Score = 25.8 bits (55), Expect = 4.2 Identities = 15/40 (37%), Positives = 20/40 (50%) Query: 30 QADAMERGRAAASVEDKHSGTKADRFRHQQRVTFKVVHCP 69 Q D +ER RAA +H+ + F Q+RV KV P Sbjct: 93 QKDLLERRRAAVDTYCRHNYGVGESFTVQRRVQPKVTVYP 132 >gi|34395493|sp|Q30167|2B1A_HUMAN HLA class II histocompatibility antigen, DRB1-10 beta chain precursor (MHC class I antigen DRB1*10) (DRw10) Length = 266 Score = 25.8 bits (55), Expect = 4.2 Identities = 15/40 (37%), Positives = 20/40 (50%) Query: 30 QADAMERGRAAASVEDKHSGTKADRFRHQQRVTFKVVHCP 69 Q D +ER RAA +H+ + F Q+RV KV P Sbjct: 93 QKDLLERRRAAVDTYCRHNYGVGESFTVQRRVQPKVTVYP 132 >gi|59797889|sp|Q9H2F5|EPC1_HUMAN Enhancer of polycomb homolog 1 Length = 836 Score = 25.4 bits (54), Expect = 5.5 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Query: 74 IKKKEENVDHGLAASLGQQLYAVEKDHDFFIAQIAVPAADRILVFWKTSY 123 ++K+EE+ H A QQ+Y ++D+ I VP A+ + ++++ Y Sbjct: 45 MEKEEESEHHLQRAISAQQVYGEKRDN----MVIPVPEAESNIAYYESIY 90 >gi|1708072|sp|P49915|GUAA_HUMAN GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase) Length = 693 Score = 25.4 bits (54), Expect = 5.5 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 53 DRFRHQQRVTFKVVHCPPGCRIKKKEENVDHGLAASLGQQLYAVEKDHDFFIAQIAVPAA 112 +R +Q++V VH G K++ ++V+ L LG Q+ + H F+ +P + Sbjct: 257 NRALNQEQVI--AVHIDNGFMRKRESQSVEEALK-KLGIQVKVINAAHSFYNGTTTLPIS 313 Query: 113 D 113 D Sbjct: 314 D 314 >gi|122252|sp|P01911|HB2G_HUMAN HLA class II histocompatibility antigen, DW2.2/DR2.2 beta chain Length = 198 Score = 25.0 bits (53), Expect = 7.2 Identities = 14/40 (35%), Positives = 20/40 (50%) Query: 30 QADAMERGRAAASVEDKHSGTKADRFRHQQRVTFKVVHCP 69 Q D +E+ RAA +H+ + F Q+RV KV P Sbjct: 64 QKDILEQARAAVDTYCRHNYGVVESFTVQRRVQPKVTVYP 103 >gi|20981706|sp|P17812|PYRG_HUMAN CTP synthase (UTP--ammonia ligase) (CTP synthetase) Length = 591 Score = 24.6 bits (52), Expect = 9.3 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 14/112 (12%) Query: 4 LIQWEDDVSTELQKITAAPMLTLVP-----IQADAMERGRAAASVEDKHSGTK-----AD 53 ++ W+D STE T+ P++ +P M G+ + K+S + AD Sbjct: 413 VLGWQDANSTEFDPTTSHPVVVDMPEHNPGQMGGTMRLGKRRTLFQTKNSVMRKLYGDAD 472 Query: 54 RFRHQQRVTFKVVHCPPGCRIKKKEENVDHGLAASLGQQLYAVE-KDHDFFI 104 + R F+V C ++ + V + G+++ VE +DH FF+ Sbjct: 473 YLEERHRHRFEVNPVWKKCLEEQGLKFVGQDVE---GERMEIVELEDHPFFV 521 >gi|26006802|sp|Q8NCM2|KCNH5_HUMAN Potassium voltage-gated channel subfamily H member 5 (Voltage-gated potassium channel subunit Kv10.2) (Ether-a-go-go potassium channel 2) (hEAG2) Length = 988 Score = 24.6 bits (52), Expect = 9.3 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Query: 61 VTFKVVHCPPGCRIKKKEENVDHGLAASLGQQLYAVEKDHDFFIAQIAVPAADRILVFWK 120 V F+ +HC PG I E+VD L + L ++ D I D +FWK Sbjct: 564 VEFQTIHCAPGDLIYHAGESVD-ALCFVVSGSLEVIQDDEVVAILGKGDVFGD---IFWK 619 >gi|4033376|sp|Q14524|SCN5A_HUMAN Sodium channel protein type V alpha subunit (Voltage-gated sodium channel alpha subunit Nav1.5) (Sodium channel protein, cardiac muscle alpha-subunit) (HH1) Length = 2016 Score = 24.6 bits (52), Expect = 9.3 Identities = 10/17 (58%), Positives = 10/17 (58%) Query: 68 CPPGCRIKKKEENVDHG 84 CP G R K EN DHG Sbjct: 335 CPEGYRCLKAGENPDHG 351 Database: Non-redundant SwissProt sequences Posted date: Mar 15, 2005 10:11 AM Number of letters in database: 60,490,055 Number of sequences in database: 164,271 Lambda K H 0.320 0.133 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 584,529 Number of Sequences: 164271 Number of extensions: 21632 Number of successful extensions: 46 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43 Number of HSP's gapped (non-prelim): 3 length of query: 129 length of database: 6,424,444 effective HSP length: 84 effective length of query: 45 effective length of database: 5,424,424 effective search space: 244099080 effective search space used: 244099080 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 52 (24.6 bits)