BLASTP 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1111057335-5883-92157478742.BLASTQ2 Query= hg16_dna_1|geneid_v1.2_predicted_protein_1|165_AA (164 letters) Database: Non-redundant SwissProt sequences 164,271 sequences; 60,490,055 total letters Score E Sequences producing significant alignments: (bits) Value gi|28558155|sp|Q8WXW3|PIBF_HUMAN Progesterone-induced blocking f... 29 0.89 gi|3913957|sp|O14782|KF3C_HUMAN Kinesin-like protein KIF3C 28 1.2 gi|25008854|sp|Q99567|NU88_HUMAN Nuclear pore complex protein Nu... 27 2.6 gi|55976668|sp|Q645U6|T2R41_PONPY Taste receptor type 2 member 4... 27 2.6 gi|2495344|sp|Q92598|HS105_HUMAN Heat-shock protein 105 kDa (Hea... 27 3.4 gi|29839474|sp|P59536|T2R41_HUMAN Taste receptor type 2 member 4... 26 7.5 gi|47117318|sp|Q9HAB8|PPCS_HUMAN Phosphopantothenate--cysteine l... 25 9.9 gi|544350|sp|P23945|FSHR_HUMAN Follicle stimulating hormone rece... 25 9.9 gi|20141240|sp|P49761|CLK3_HUMAN Dual specificity protein kinase... 25 9.9 gi|1718189|sp|P35916|VGFR3_HUMAN Vascular endothelial growth fac... 25 9.9 gi|34395670|sp|Q8IV61|GRP3_HUMAN RAS guanyl releasing protein 3 ... 25 9.9 gi|24212017|sp|Q9NU22|MDN1_HUMAN Midasin (MIDAS-containing protein) 25 9.9 ALIGNMENTS >gi|28558155|sp|Q8WXW3|PIBF_HUMAN Progesterone-induced blocking factor 1 Length = 757 Score = 28.9 bits (63), Expect = 0.89 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 83 LKTDYILKKIEINEKVFENLHNMHYHYAYIQDDIFCSEKRLDLCKPGELWKQKFEIL 139 LK DY+ K E+ EK+ + LH + + + +K D K EL KQ+ E + Sbjct: 77 LKVDYLTKIEELEEKLNDALHQKQLLTLRLDNQLAFQQK--DASKYQELMKQEMETI 131 >gi|3913957|sp|O14782|KF3C_HUMAN Kinesin-like protein KIF3C Length = 793 Score = 28.5 bits (62), Expect = 1.2 Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 10 GRESPDHKFHCQKFITKNCSKVTRRAERAKNETRFTLARFNFVFEVVTELDGYVQLEEGR 69 GR DH QK + ++ + R + + + R E+ Q E + Sbjct: 525 GRNIMDHTNEQQKMLELKRQEIAEQKRREREMQQEMMLRDEETMELRGTYTSLQQEVEVK 584 Query: 70 NNTLDKFIPKLVILKT-------DYILKKIEINEKVFENLHNMHYHYAYIQDDIFCSEKR 122 L K KL +K +YI + ++ E E + Y I++ I Sbjct: 585 TKKLKKLYAKLQAVKAEIQDQHDEYIRVRQDLEEAQNEQTRELKLKYLIIENFI------ 638 Query: 123 LDLCKPGELWKQKFEILKWKYVDCKEKQEK 152 P E +K +I+ ++DC+E+Q K Sbjct: 639 -----PPE---EKNKIMNRLFLDCEEEQWK 660 >gi|25008854|sp|Q99567|NU88_HUMAN Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88 kDa nuclear pore complex protein) Length = 741 Score = 27.3 bits (59), Expect = 2.6 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 8/78 (10%) Query: 82 ILKTDYILKKIEINEKVFENLHNM-HYHYAYIQDDIFCSEKRLDLCKPGELWKQKFEILK 140 + + YILK+ E++ + + ++D +C E+R L ++ E L Sbjct: 571 VFREQYILKQDLAKEEIQRRVKLLCDQKKKQLEDLSYCREERKSL-------REMAERLA 623 Query: 141 WKYVDCKEKQEKTMLNME 158 KY + KEKQE M M+ Sbjct: 624 DKYEEAKEKQEDIMNRMK 641 >gi|55976668|sp|Q645U6|T2R41_PONPY Taste receptor type 2 member 41 (T2R41) Length = 307 Score = 27.3 bits (59), Expect = 2.6 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 87 YILKKIEINEKVFENLHNMHYHYAYIQDDIFCSEKRLDLC-KPGELWKQKFEILKWKY 143 Y K+E + + ++H+H+ + FCS + C K + F LKW++ Sbjct: 69 YSAHKVEYSGGLSRQFFHLHWHFLNLATFXFCSWLSVLFCVKXANITHPTFLWLKWRF 126 >gi|2495344|sp|Q92598|HS105_HUMAN Heat-shock protein 105 kDa (Heat shock 110 kDa protein) (Antigen NY-CO-25) Length = 858 Score = 26.9 bits (58), Expect = 3.4 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 10/100 (10%) Query: 50 NFVFEVVTELDGYVQLEEGRNNTLDKFIPKLVILKTDYILKKIEINE-----KVFENLHN 104 NF+ ++TE + ++ EEG + ++ KL L K+ E K+FE L Sbjct: 664 NFL-RLLTETEDWLY-EEGEDQAKQAYVDKLEELMKIGTPVKVRFQEAEERPKMFEELGQ 721 Query: 105 MHYHYAYIQDDIFCSEKR---LDLCKPGELWKQKFEILKW 141 HYA I D +++ +D + ++ K E+++W Sbjct: 722 RLQHYAKIAADFRNKDEKYNHIDESEMKKVEKSVNEVMEW 761 >gi|29839474|sp|P59536|T2R41_HUMAN Taste receptor type 2 member 41 (T2R41) (T2R59) Length = 307 Score = 25.8 bits (55), Expect = 7.5 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 87 YILKKIEINEKVFENLHNMHYHYAYIQDDIFCSEKRLDLC-KPGELWKQKFEILKWKYV 144 Y +K+E + + ++H+H+ FCS + C K + F LKW+++ Sbjct: 69 YSAQKVEYSGGLGRQFFHLHWHFLNSATFWFCSWLSVLFCVKIANITHSTFLWLKWRFL 127 >gi|47117318|sp|Q9HAB8|PPCS_HUMAN Phosphopantothenate--cysteine ligase (Phosphopantothenoylcysteine synthetase) (PPC synthetase) Length = 311 Score = 25.4 bits (54), Expect = 9.9 Identities = 10/26 (38%), Positives = 17/26 (65%) Query: 81 VILKTDYILKKIEINEKVFENLHNMH 106 ++L + I K +EI EK+ +NL + H Sbjct: 278 LLLSEEEIEKGVEIEEKIVDNLQSRH 303 >gi|544350|sp|P23945|FSHR_HUMAN Follicle stimulating hormone receptor precursor (FSH-R) (Follitropin receptor) Length = 695 Score = 25.4 bits (54), Expect = 9.9 Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 23/115 (20%) Query: 2 NCINRVQSGRESPDHKFHCQKF-ITKNCSKVTRRAERAKNETRFTLARFNFVFEVVTELD 60 +C NRV F CQ+ +T+ S + R A E RF L + + + Sbjct: 24 HCSNRV----------FLCQESKVTEIPSDLPRNAI----ELRFVLTKLRVIQKGAFSGF 69 Query: 61 GYVQ-LEEGRNNTLDKF-------IPKLVILKTDYILKKIEINEKVFENLHNMHY 107 G ++ +E +N+ L+ +PKL ++ + + IN + F+NL N+ Y Sbjct: 70 GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQY 124 >gi|20141240|sp|P49761|CLK3_HUMAN Dual specificity protein kinase CLK3 (CDC like kinase 3) Length = 490 Score = 25.4 bits (54), Expect = 9.9 Identities = 8/27 (29%), Positives = 16/27 (59%) Query: 16 HKFHCQKFITKNCSKVTRRAERAKNET 42 H HC K T++CS + R++++ + Sbjct: 106 HAHHCHKRRTRSCSSASSRSQQSSKRS 132 >gi|1718189|sp|P35916|VGFR3_HUMAN Vascular endothelial growth factor receptor 3 precursor (VEGFR-3) (Tyrosine-protein kinase receptor FLT4) Length = 1298 Score = 25.4 bits (54), Expect = 9.9 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 10/93 (10%) Query: 56 VTELDGYVQLEEGRNNTLDKFIPKLVILKTDYILKKIEINEKVFENLHNMHYHYAYIQDD 115 + LD + + EG+N T+ K + + + Y K ++ KV ++ ++++ I D Sbjct: 501 IESLDTWTEFVEGKNKTVSKLVIQNANVSAMY---KCVVSNKVGQDERLIYFYVTTIPDG 557 Query: 116 IFCSEKRLDLCKPG-------ELWKQKFEILKW 141 K + G + K+E L+W Sbjct: 558 FTIESKPSEELLEGQPVLLSCQADSYKYEHLRW 590 >gi|34395670|sp|Q8IV61|GRP3_HUMAN RAS guanyl releasing protein 3 (Calcium and DAG-regulated guanine nucleotide exchange factor III) (Guanine nucleotide exchange factor for Rap1) Length = 690 Score = 25.4 bits (54), Expect = 9.9 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 9/68 (13%) Query: 70 NNTLDK-FIPKLVILKTDYILKKIEINEKVFENLHNMHYHYAYIQDDIFCSEKRLDLCKP 128 N LD ++P++V+L + L E+ EK+ N C+E RL +C Sbjct: 26 NGELDNSYLPRIVLLMHRWYLSSTELAEKLLCMYRN--------ATGESCNEFRLKICYF 77 Query: 129 GELWKQKF 136 W KF Sbjct: 78 MRYWILKF 85 >gi|24212017|sp|Q9NU22|MDN1_HUMAN Midasin (MIDAS-containing protein) Length = 5596 Score = 25.4 bits (54), Expect = 9.9 Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 20 CQKFITKNCSKVTRRAERAKNETR 43 C KF+ K +K+ R E KNE + Sbjct: 1664 CLKFLIKRLAKIVRLTEYQKNELK 1687 Database: Non-redundant SwissProt sequences Posted date: Mar 15, 2005 10:11 AM Number of letters in database: 60,490,055 Number of sequences in database: 164,271 Lambda K H 0.323 0.138 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 446,286 Number of Sequences: 164271 Number of extensions: 17793 Number of successful extensions: 52 Number of sequences better than 10.0: 0 Number of HSP's better than 10.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52 Number of HSP's gapped (non-prelim): 0 length of query: 164 length of database: 6,971,665 effective HSP length: 88 effective length of query: 76 effective length of database: 5,777,945 effective search space: 439123820 effective search space used: 439123820 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 54 (25.4 bits)