BLASTP 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1111066159-28930-133648034621.BLASTQ4 Query= hg16_dna|GENSCAN_predicted_peptide_7|746_aa (746 letters) Database: Non-redundant SwissProt sequences 164,271 sequences; 60,490,055 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
RID: 1111066159-28930-133648034621.BLASTQ4
Query= hg16_dna|GENSCAN_predicted_peptide_7|746_aa (746 letters)
Database: Non-redundant SwissProt sequences 164,271 sequences; 60,490,055 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Score E Sequences producing significant alignments: (bits) Value gi|18202492|sp|Q12980|U171_HUMAN CGTHBA protein (-14 gene p... 493 e-139 gi|18203553|sp|Q9VUB4|U171_DROME Hypothetical UPF0171 prote... 145 3e-34 gi|18202964|sp|Q9HGM7|YW04_SCHPO Hypothetical UPF0171 prote... 57 2e-07 gi|18202514|sp|Q20069|U171_CAEEL Hypothetical UPF0171 prote... 53 3e-06 gi|731724|sp|P38844|YHU3_YEAST Hypothetical 33.4 kDa protei... 39 0.051 gi|731903|sp|P40434|YIR7_YEAST Hypothetical 197.5 kDa prote... 33 2.8 gi|1176490|sp|P40889|YJW5_YEAST Hypothetical 197.6 kDa prot... 33 2.8 gi|32171814|sp|Q8BZZ3|WWP1_MOUSE Nedd-4-like E3 ubiquitin-p... 33 3.6 gi|48429243|sp|P87179|YB1E_SCHPO Serine-rich protein C30B4.... 33 3.6 gi|547907|sp|P36027|MID2_YEAST Mating process protein MID2 ... 32 4.8 gi|731604|sp|P38742|YHC3_YEAST Hypothetical 130.0 kDa prote... 32 8.1 gi|465488|sp|P33301|XRS2_YEAST DNA repair protein XRS2 32 8.1 gi|41712568|sp|P02836|HMEN_DROME Segmentation polarity home... 32 8.1 gi|50401145|sp|Q9BE18|MGE1_MACFA Melanoma-associated antige... 32 8.1 gi|3182939|sp|Q91145|CA1C_NOTVI Collagen alpha 1(XII) chain 32 8.1 Alignments
Score E Sequences producing significant alignments: (bits) Value gi|18202492|sp|Q12980|U171_HUMAN CGTHBA protein (-14 gene p... 493 e-139 gi|18203553|sp|Q9VUB4|U171_DROME Hypothetical UPF0171 prote... 145 3e-34 gi|18202964|sp|Q9HGM7|YW04_SCHPO Hypothetical UPF0171 prote... 57 2e-07 gi|18202514|sp|Q20069|U171_CAEEL Hypothetical UPF0171 prote... 53 3e-06 gi|731724|sp|P38844|YHU3_YEAST Hypothetical 33.4 kDa protei... 39 0.051 gi|731903|sp|P40434|YIR7_YEAST Hypothetical 197.5 kDa prote... 33 2.8 gi|1176490|sp|P40889|YJW5_YEAST Hypothetical 197.6 kDa prot... 33 2.8 gi|32171814|sp|Q8BZZ3|WWP1_MOUSE Nedd-4-like E3 ubiquitin-p... 33 3.6 gi|48429243|sp|P87179|YB1E_SCHPO Serine-rich protein C30B4.... 33 3.6 gi|547907|sp|P36027|MID2_YEAST Mating process protein MID2 ... 32 4.8 gi|731604|sp|P38742|YHC3_YEAST Hypothetical 130.0 kDa prote... 32 8.1 gi|465488|sp|P33301|XRS2_YEAST DNA repair protein XRS2 32 8.1 gi|41712568|sp|P02836|HMEN_DROME Segmentation polarity home... 32 8.1 gi|50401145|sp|Q9BE18|MGE1_MACFA Melanoma-associated antige... 32 8.1 gi|3182939|sp|Q91145|CA1C_NOTVI Collagen alpha 1(XII) chain 32 8.1
>gi|18202492|sp|Q12980|U171_HUMAN CGTHBA protein (-14 gene protein) Length = 569 Score = 493 bits (1269), Expect = e-139 Identities = 256/297 (86%), Positives = 256/297 (86%), Gaps = 41/297 (13%) Query: 1 MRDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTSKPRSRYAASNTGDHADEQDG 60 MRDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTSKPRSRYAASNTGDHADEQDG Sbjct: 1 MRDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTSKPRSRYAASNTGDHADEQDG 60 Query: 61 DSRFSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQVGFSLGMHRPSGQM 120 DSRFSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQ Sbjct: 61 DSRFSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQ-------------- 106 Query: 121 WLSLGRQAWSILALGGSELRLTPALVKISKTDPSPKREAPTMILFNVVFALRANADPSVI 180 ISKTDPSPKREAPTMILFNVVFALRANADPSVI Sbjct: 107 ---------------------------ISKTDPSPKREAPTMILFNVVFALRANADPSVI 139 Query: 181 NCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADGNEGPQSPFHHILPKCK 240 NCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADGNEGPQSPFHHILPKCK Sbjct: 140 NCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADGNEGPQSPFHHILPKCK 199 Query: 241 LARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAASSLIPPEAIERSLKAIR 297 LARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAASSLIPPEAIERSLKAIR Sbjct: 200 LARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAASSLIPPEAIERSLKAIR 256
Score = 446 bits (1146), Expect = e-124 Identities = 268/454 (59%), Positives = 278/454 (61%), Gaps = 91/454 (20%) Query: 304 PVQDLVQDLVHTW---CIPGAYPVH--TWCR-TWCIPGA--YLVQDLVHTRCRVPALRVF 355 P L +DL + C G +H +W ++C+P Y L+ +L+ Sbjct: 196 PKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAASSLIPPEAIERSLKAI 255 Query: 356 RDSPYHAXXXXXXXXXXXXXXPIDCSPALVRVIKTTSAVKNXXXXXXXXXXXXXXXXXXX 415 R PYHA PIDCSPALVRVIKTTSAVKN Sbjct: 256 R--PYHALLLLSDEKSLLGELPIDCSPALVRVIKTTSAVKNLQQLAQDADLALLQ----- 308 Query: 416 XXXWRCGSPWGPALVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSH 475 VFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSH Sbjct: 309 --------------VFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSH 354 Query: 476 QFPSHDLPSVLAKFSLPVSLSEFRNPLAPAVQEEGERALQSWLAAGGSLSEKRAFLPTQL 535 QFPSHDLPSVLAKFSLPVSLSEFRNPLAPAVQE TQL Sbjct: 355 QFPSHDLPSVLAKFSLPVSLSEFRNPLAPAVQE------------------------TQL 390 Query: 536 IQMVVWMLQRRLLIQLHTYVCLMAXXXXXXXXXXXDDVPFTARVGGRSLSTPNALSFGSP 595 IQMVVWMLQRRLLIQLHTYVCLMA DDVPFTARVGGRSLSTPNALSFGSP Sbjct: 391 IQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDVPFTARVGGRSLSTPNALSFGSP 450 Query: 596 TSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASCRSMNAQPSSVYP---QPRTL 652 TSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLAS P P L Sbjct: 451 TSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASLSEHERAAILSVPAAQNPEDL 510 Query: 653 RTSACLPGSGQKVDRDVRNRTTKSTENRWGPVRDGVSAFRLLHYFRGRHHLEEIMYNENT 712 R A RLLHYFRGRHHLEEIMYNENT Sbjct: 511 RMFA-----------------------------------RLLHYFRGRHHLEEIMYNENT 535 Query: 713 RRSQLLMLFDKFRSVLVVTTHEDPVIAVFQALLP 746 RRSQLLMLFDKFRSVLVVTTHEDPVIAVFQALLP Sbjct: 536 RRSQLLMLFDKFRSVLVVTTHEDPVIAVFQALLP 569
>gi|18203553|sp|Q9VUB4|U171_DROME Hypothetical UPF0171 protein CG8783 Length = 610 Score = 145 bits (367), Expect = 3e-34 Identities = 94/312 (30%), Positives = 150/312 (48%), Gaps = 68/312 (21%) Query: 1 MRDNTSPISVILVSSGSRGNKLLFRYPFQRSQE----HPASQTSKPRSRYAASNTGD--- 53 M N +P++VILV S+G++LL+RYP+Q + + + S+ R+ YA +NT D Sbjct: 1 METNVNPLAVILVYFDSKGDRLLYRYPYQTLGQTEVANDEQRKSRKRNPYAVANTDDLLQ 60 Query: 54 ------HADEQDGDSRFSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQV 107 A Q F+D +L+ + A K ++C QKFELK+++VRFV HPTL+ Sbjct: 61 TPTHLGAAKSQGQLQGFADEVLSALFAVKPQLCNQKFELKLNDVRFVSHPTLIPQ----- 115 Query: 108 GFSLGMHRPSGQMWLSLGRQAWSILALGGSELRLTPALVKISKTDPSPKREAPTMILFNV 167 K ++ P K++ +L N+ Sbjct: 116 ---------------------------------------KEQRSGPMAKQQ----MLINI 132 Query: 168 VFALRANADPSVINCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADGNEG 227 VFAL A A S++ C H LS+R+ L+ EE+R YLT + + DE + Sbjct: 133 VFALHAQASYSIVKCYHELSKRLGLALKFEEQRSGYLTEQTAQMARTHDE-----QQQQP 187 Query: 228 PQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIH--YAASSLIP 285 + I +C LA+ L+ + LCT+G++ +N L + FCLP K H + S++ Sbjct: 188 LERTLELIAERCSLAQALRSIFHDLCTTGLLSTSLNHNLTLCFCLPAKAHQLHKKGSMVD 247 Query: 286 PEAIERSLKAIR 297 PE I+R L+A++ Sbjct: 248 PETIDRCLRALK 259
Score = 138 bits (347), Expect = 6e-32 Identities = 110/336 (32%), Positives = 149/336 (44%), Gaps = 69/336 (20%) Query: 430 VFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSHDLPSVLAKF 489 V++L +HLVYW KA IIYPLCE NVY+++P+A + S L E+FS +F L V++ F Sbjct: 312 VYKLVSHLVYWAKATIIYPLCETNVYVIAPDAPLHTKSHLVEKFSARFAGMSLFEVISDF 371 Query: 490 SLPVSLSEFRNPLAPAVQEEGERALQSWLAAGGSLSEKRAFLPTQLIQMVVWMLQRRLLI 549 SLP S+ PL Q+ + + L QMV+WMLQ LL+ Sbjct: 372 SLPTSIGHLTTPL----QQPARQGI--------------------LAQMVIWMLQHHLLM 407 Query: 550 QLHTYVCLMAXXXXXXXXXXXDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMD 609 QLHTYV M G S S N L SD+ P D Sbjct: 408 QLHTYVQFMPSEDEF----------------GDSASCSNHL---RDAISDEEGDQEPDAD 448 Query: 610 NSSAELLPSGDSPL---------NQRMTENLLASCRSMN--AQPSSVYPQ----PRTLRT 654 +L PL ++R +S S N QPSS + ++ T Sbjct: 449 ELHGSMLSMSSHPLPVPAVLVGGHRREASEDHSSLASDNIAVQPSSSHKSNFSITASMST 508 Query: 655 SACLPGSGQKVDRDVRNRTTKSTENRWGPVR--------DGVSAFRLLH---YFRGRHHL 703 C + ++ ++ ++ +R D +S L+ YF+ HHL Sbjct: 509 DNCDSLDSMEDEQKLKELLQVFSDADRAAIRRIPASANVDDLSLLVKLYQMGYFKSEHHL 568 Query: 704 EEIMYNENTRRSQLLMLFDKFRSVLVVTTHEDPVIA 739 EEIMY EN RRSQLL L DKFR VL++ EDP IA Sbjct: 569 EEIMYFENLRRSQLLQLLDKFRDVLIIYETEDPAIA 604
>gi|18202964|sp|Q9HGM7|YW04_SCHPO Hypothetical UPF0171 protein C543.04 in chromosome II Length = 585 Score = 57.0 bits (136), Expect = 2e-07 Identities = 65/292 (22%), Positives = 117/292 (40%), Gaps = 43/292 (14%) Query: 8 ISVILVSSGSRGNKLLFRYPFQRSQEHPASQTSKPRSRYAASNTGDHADEQDGDSRFSDV 67 +++ LV + G +F +P Q A+ + + A + D ++RF++V Sbjct: 9 VAIFLVEKTTSGANFVFHWPLQPQVRLQATHHNNDSAESAIGMLDLDDSDDDENNRFTEV 68 Query: 68 ------------ILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQVGFSLGMHR 115 LA +L+ + E+C QKFE+ +D + F+G P +G Sbjct: 69 ADDTHVLGYEKGFLANMLSPRIELCNQKFEIWVDGLTFLGCPV-------HIG------- 114 Query: 116 PSGQMWLSLGRQAWSILA-LGGSELRLTPALVKIS----KTDPSPKREAPTMILFNVVFA 170 P+G+ W + ++ + S L P S + S + +M LF+VVF Sbjct: 115 PNGE-WAKRRKPRTTVESNASSSHLVSKPESSHPSTGSFEVKSSSSKSRSSMSLFHVVFV 173 Query: 171 LRANA----DPSVINCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADGNE 226 L P+V ++ ++ T L++E+ + Y+ E IL L ++ S+ + Sbjct: 174 LNVPTATVYRPTVNTMYDHIVVKLVTGLKYEQAKRNYVENECIHILKLTEKYSSQNVPFD 233 Query: 227 --GPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKI 276 Q P H LA L Y++L L IN + +S P + Sbjct: 234 VYAAQIPHH-----SNLASVLATTYEALINMHTAYLEINQSINLSLLWPMSV 280
Score = 44.3 bits (103), Expect = 0.001 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%) Query: 431 FQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSHDLPSV 485 F LA HL++W KAI I PL N Y+ SP A++ ++ F +FPS LPS+ Sbjct: 371 FILAKHLIHWRKAIAIPPLLIRNTYVTSPTANLFNLEEESKLFKKEFPS--LPSL 423
>gi|18202514|sp|Q20069|U171_CAEEL Hypothetical UPF0171 protein F35H10.7 in chromosome IV Length = 511 Score = 53.1 bits (126), Expect = 3e-06 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 27/130 (20%) Query: 430 VFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSH-DLPSVLAK 488 VF + HL+ W +AI+IYPLC N+Y + + +AE+F+ QF + L + LA Sbjct: 300 VFMIIRHLLQWTRAILIYPLCNTNIYTSATSPQP--LDKMAEKFTAQFGNTIHLAAGLAH 357 Query: 489 FSLPVSLSEFRNPLAPAVQEEGERALQSWLAAGGSLSEKRAFLPTQLIQMVVWMLQRRLL 548 F+ P +L F P + E+G RA ++VV +L+ ++L Sbjct: 358 FNPPKTLDTFIRKNLP-LHEQGVRA-----------------------KLVVALLRHQML 393 Query: 549 IQLHTYVCLM 558 +QLH + ++ Sbjct: 394 MQLHQFYYIL 403
Score = 44.7 bits (104), Expect = 0.001 Identities = 70/363 (19%), Positives = 126/363 (34%), Gaps = 93/363 (25%) Query: 9 SVILVSSGSRGNKLLFRYPFQRSQEHPASQTSKPRSRYAASNTGDHADE-----QDGDSR 63 +V+ +G G K++ YP ++ S+ +P S SN G +D Sbjct: 16 AVMCFLTGQSGEKIVSIYPHRKPATKAPSKDPQPSS----SNPGQCVKPVLTSVKDPSYG 71 Query: 64 FSDV---------ILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQVGFSLGMH 114 F V +LA + T+ C F++KI+N RFV +P Sbjct: 72 FGRVDTEFDMSLGMLAYVFKTQEIACNDGFDMKINNQRFVAYP----------------- 114 Query: 115 RPSGQMWLSLGRQAWSILALGGSELRLTPALVKISKTDPSPKREAPTMILFNVVFALRAN 174 + W + G T ++VFAL+ Sbjct: 115 ----KTWKARGES---------------------------------TNYQISIVFALKNG 137 Query: 175 ADPSVINCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADGNEGPQS--PF 232 + + LS +IA L + +L RE K AD E P P Sbjct: 138 CEQHTASAYQTLSNKIAVSLVMLQNYFGFLEREDK-----------WADNAEEPNKDHPL 186 Query: 233 HHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAASSLIPPEAIERS 292 + + L E ++ + G + ++ +++E+ FC + H + P+ + Sbjct: 187 EEFAKTSFIVQPLAEMFEEVRNRGNIHKYLINFVELGFC--DEAHALTKLNVVPKGRQEI 244 Query: 293 LKAIRCIPDAHPVQDLVQDLVHTWCIPGAYPVHTWCRTWCIPGAYLVQDLVHTRCRVPAL 352 + +R + H + L++D+ W P A P+ + C P ++ + T +P Sbjct: 245 DEIVRKMKPYHGIL-LLEDV---WPTPDANPIVAKLLSHCSPDRSILD--MSTASGIPIF 298 Query: 353 RVF 355 VF Sbjct: 299 EVF 301
Score = 32.7 bits (73), Expect = 3.6 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Query: 658 LPGSGQKVDRDVRNRTTKSTENRWGPVRDGVSAF-RLLHYFRGRHHLEEIMYNENTRRSQ 716 LP + V D+ ++T + V+ +S F ++ G HHLEEI Y N R++ Sbjct: 431 LPNDVKGVVADICAEMLETTS--YASVKRTLSLFVKVAPMMDGNHHLEEIKYKNNLDRTE 488 Query: 717 LLMLFDKFRSVLVVTTHEDP 736 + +F F+ LV+ T P Sbjct: 489 IEGVFVSFK--LVIATFRRP 506
>gi|731724|sp|P38844|YHU3_YEAST Hypothetical 33.4 kDa protein in RPL44B-RPC10 intergenic region precursor Length = 325 Score = 38.9 bits (89), Expect = 0.051 Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 9/110 (8%) Query: 574 PFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSS----AELLPSGDSPLNQRMTE 629 PF++++ S S ++ SF + +SS ++LTS S +SS L PS N ++T Sbjct: 166 PFSSQLSSSSSSETSSSSFSTSSSSAPLSLTSSSSSSSSFATIITLAPSSSKSGNSQLT- 224 Query: 630 NLLASCRSMNAQPSSVYPQPRTLRTSACLPGSGQKVDRDVRNRTTKSTEN 679 LAS S +A SS TS +P S VD R T+ E+ Sbjct: 225 --LASSSSTSAVESSQTGSTIARTTSTLVPSS--SVDTTSRATTSMPLES 270
>gi|731903|sp|P40434|YIR7_YEAST Hypothetical 197.5 kDa protein in SDL1 5'region Length = 1758 Score = 33.1 bits (74), Expect = 2.8 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 5/104 (4%) Query: 588 NALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASCR-----SMNAQP 642 +A + S SS + T T + N++A S +S N TE+ +S S N+ Sbjct: 1278 SATTTKSINSSTNATTTESTNSNTNATTTESTNSSTNATTTESTNSSTNATTTESTNSNT 1337 Query: 643 SSVYPQPRTLRTSACLPGSGQKVDRDVRNRTTKSTENRWGPVRD 686 S+ + TSA S ++ N+ + +NR+ PV D Sbjct: 1338 SAATTESTNSNTSATTTESTNASAKEDANKDGNAEDNRFHPVTD 1381
>gi|1176490|sp|P40889|YJW5_YEAST Hypothetical 197.6 kDa protein in FSP2 5'region Length = 1758 Score = 33.1 bits (74), Expect = 2.8 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 5/104 (4%) Query: 588 NALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASCR-----SMNAQP 642 +A + S SS + T T + N++A S +S N TE+ +S S N+ Sbjct: 1278 SATTTKSINSSTNATTTESTNSNTNATTTESTNSSTNATTTESTNSSTNATTTESTNSNT 1337 Query: 643 SSVYPQPRTLRTSACLPGSGQKVDRDVRNRTTKSTENRWGPVRD 686 S+ + TSA S ++ N+ + +NR+ PV D Sbjct: 1338 SAATTESTNSNTSATTTESTNASAKEDANKDGNAEDNRFHPVTD 1381
>gi|32171814|sp|Q8BZZ3|WWP1_MOUSE Nedd-4-like E3 ubiquitin-protein ligase WWP1 (WW domain-containing protein 1) Length = 918 Score = 32.7 bits (73), Expect = 3.6 Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 12/116 (10%) Query: 577 ARVGGRSLSTPNALSFGSPTSSDDMTLTSPSM--DNSSA--ELLPSGDSPLNQRMTENLL 632 ++V R + P S +SD + S S+ DN+S LLPS D+ Sbjct: 218 SQVAARPKNAPAPKPVTSAPTSDTVNGESSSVLADNTSTMGTLLPSEDTTST-------- 269 Query: 633 ASCRSMNAQPSSVYPQPRTLRTSACLPGSGQKVDRDVRNRTTKSTENRWGPVRDGV 688 ++C S Q V P + S C+P + +V + R+ +++R V D V Sbjct: 270 SNCTSTTTQEPPVQEPPASSEHSECIPSASAEVGPEARSLIDPDSDSRNNSVFDKV 325
>gi|48429243|sp|P87179|YB1E_SCHPO Serine-rich protein C30B4.01c precursor Length = 374 Score = 32.7 bits (73), Expect = 3.6 Identities = 20/60 (33%), Positives = 31/60 (51%) Query: 585 STPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASCRSMNAQPSS 644 ST ++ S SP+SS T TSPS +SS+ S S + + + +S S ++ SS Sbjct: 134 STTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 193
>gi|547907|sp|P36027|MID2_YEAST Mating process protein MID2 (Serine-rich protein SMS1) (Protein kinase A interference protein) Length = 376 Score = 32.3 bits (72), Expect = 4.8 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Query: 583 SLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASCRSMNAQP 642 S S+ ++ S S SSD + +S S+ ++SA S S + + L+S S ++ P Sbjct: 99 SFSSDSSTSSSSSASSDSSSSSSFSISSTSATSESSTSSTQTSTSSSSSLSSTPSSSSSP 158 Query: 643 SSVYPQPRTLRT-SACLPGSGQKVDRDVRNRTTKS 676 S++ P T T S G + + +T S Sbjct: 159 STITSAPSTSSTPSTTAYNQGSTITSIINGKTILS 193
>gi|731604|sp|P38742|YHC3_YEAST Hypothetical 130.0 kDa protein in SNF6-SPO11 intergenic region Length = 1146 Score = 31.6 bits (70), Expect = 8.1 Identities = 14/34 (41%), Positives = 20/34 (58%) Query: 434 AAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYS 467 A HL+YW A I+ PL Y++SP A + Y+ Sbjct: 825 ALHLMYWRHARIVIPLSSKYTYIVSPLAPIQGYT 858
>gi|465488|sp|P33301|XRS2_YEAST DNA repair protein XRS2 Length = 854 Score = 31.6 bits (70), Expect = 8.1 Identities = 13/36 (36%), Positives = 19/36 (52%) Query: 30 RSQEHPASQTSKPRSRYAASNTGDHADEQDGDSRFS 65 + H S TS+ R + ASN GD D+ D +F+ Sbjct: 813 KQSRHSRSATSRSRGSFGASNNGDGDDDDDDGPKFT 848
>gi|41712568|sp|P02836|HMEN_DROME Segmentation polarity homeobox protein engrailed Length = 552 Score = 31.6 bits (70), Expect = 8.1 Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 583 SLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASCRSMNAQP 642 SL++P S S SS TS S +S S S LN + L AS +NA Sbjct: 325 SLASPPPASNASTISSTSSVATSSSSSSSGCS---SAASSLNSSPSSRLGASGSGVNASS 381 Query: 643 SSVYPQPRTLRTSACLPGSGQKVDRDVRNRTTKST 677 P P SA SG + D R+ T +T Sbjct: 382 PQPQPIP---PPSAVSRDSGMESSDDTRSETGSTT 413
>gi|50401145|sp|Q9BE18|MGE1_MACFA Melanoma-associated antigen E1 (MAGE-E1 antigen) (QflA-10248) Length = 957 Score = 31.6 bits (70), Expect = 8.1 Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 17/95 (17%) Query: 581 GRSLSTPNALSFGSPTS------SDDMTLTSP-SMDNSSAELLPS-GDSPLNQRMTENLL 632 GRS S P S GS TS TL P + D + +LP+ G+ P L Sbjct: 363 GRSTSVPPTASDGSDTSVPPTPGEGPSTLVQPTASDRPGSSVLPNPGEGP------STLF 416 Query: 633 ASCRSMNAQPSS---VYPQPRTLRTSACLPGSGQK 664 +S S++ PS V P PR + S G K Sbjct: 417 SSSASVDRNPSKCSIVLPSPRVTKASVDSDSEGPK 451
>gi|3182939|sp|Q91145|CA1C_NOTVI Collagen alpha 1(XII) chain Length = 929 Score = 31.6 bits (70), Expect = 8.1 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 16/155 (10%) Query: 582 RSLSTPNALSFGSPTSSDDMTLTSPSMDNSSA------------ELLPSGDSPLNQRMTE 629 +SL+ P LSF TSS SP+ +++ A E + S +P + Sbjct: 63 KSLTPPRDLSFAEVTSSSFRVSWSPAAEDAIAYLVNYTVALGGEEFVVSVPAPTTSTVLT 122 Query: 630 NLLASCRSMNAQPSSVYPQ---PRTLRTSACLPGSGQKVDRDVRNRTTKSTENRWGPVRD 686 NL + + + YP+ P L G + V + TT S + W P Sbjct: 123 NLFPK-TTYEVRVVAEYPEGESPPLKGEETTLEVRGAPRNLRVTDETTDSFKVGWTPAPG 181 Query: 687 GVSAFRLLHYFRGRHHLEEIMYNENTRRSQLLMLF 721 V +R+ + +E+ N R + L LF Sbjct: 182 NVLRYRIAYRPVAGGERKEVTVQGNERATTLYNLF 216
Database: Non-redundant SwissProt sequences Posted date: Mar 15, 2005 10:11 AM Number of letters in database: 60,490,055 Number of sequences in database: 164,271 Lambda K H 0.321 0.134 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,396,850 Number of Sequences: 164271 Number of extensions: 615783 Number of successful extensions: 1208 Number of sequences better than 10.0: 0 Number of HSP's better than 10.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1208 Number of HSP's gapped (non-prelim): 0 length of query: 746 length of database: 60,490,055 effective HSP length: 117 effective length of query: 629 effective length of database: 41,270,348 effective search space: 25959048892 effective search space used: 25959048892 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 70 (31.6 bits)
