RID=1111065931-20722-103091006146.BLASTQ4, hg16_dna|GENSCAN_predicted_peptide_4|925

BLASTP 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
RID: 1111065931-20722-103091006146.BLASTQ4
Query= hg16_dna|GENSCAN_predicted_peptide_4|925_aa (925 letters)
Database: Non-redundant SwissProt sequences 164,271 sequences; 60,490,055 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Taxonomy reports
Distribution of 20 Blast Hits on the Query Sequence


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|1731023|sp|P54493|YQGP_BACSU  Hypothetical protein yqgP         53   3e-06 
gi|59800189|sp|Q9NX52|RHBD2_HUMAN  Rhomboid-related protein ...    53   3e-06 
gi|21542300|sp|P58872|RHB4_HUMAN  Rhomboid-related protein 4...    43   0.004 
gi|21542301|sp|P58873|RHB4_MOUSE  Rhomboid-related protein 4...    40   0.029 
gi|54036334|sp|Q19821|ROM1_CAEEL  Rhomboid related protein 1       40   0.038 
gi|20137251|sp|Q9UM73|ALK_HUMAN  ALK tyrosine kinase recepto...    38   0.11  
gi|1345843|sp|P07141|CSF1_MOUSE  Macrophage colony stimulati...    37   0.19  
gi|20137202|sp|P97793|ALK_MOUSE  ALK tyrosine kinase recepto...    36   0.55  
gi|30912753|sp|Q9VX09|ARP8_DROME  Probable actin-related pro...    35   0.93  
gi|20141697|sp|P20350|RHOM_DROME  Rhomboid protein (Veinlet ...    35   1.2   
gi|12644166|sp|P22987|KIN1_SCHPO  Protein kinase kin1              35   1.2   
gi|12643312|sp|O15165|C181_HUMAN  Protein C18orf1                  33   3.6   
gi|20139374|sp|O75783|RHB1_HUMAN  Rhomboid-related protein 1...    33   3.6   
gi|39931686|sp|O74502|MSH6_SCHPO  DNA mismatch repair protei...    33   3.6   
gi|136124|sp|P03008|TNP3_ECOLI  Transposase for transposon Tn3     33   3.6   
gi|21542217|sp|Q8VC82|RHB1_MOUSE  Rhomboid-related protein 1...    33   4.6   
gi|32469763|sp|Q91VW5|GOA4_MOUSE  Golgi autoantigen, golgin ...    32   6.1   
gi|20140695|sp|Q969W9|TMEP_HUMAN  Transmembrane prostate and...    32   7.9   
gi|59798544|sp|Q6MTE4|SYG_MYCMS  Glycyl-tRNA synthetase (Gly...    32   7.9   
gi|30913024|sp|Q8LK56|DME_ARATH  Transcriptional activator D...    32   7.9   


Alignments

>gi|1731023|sp|P54493|YQGP_BACSU   Hypothetical protein yqgP
          Length = 507

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 8/149 (5%)

Query: 718 QFYRLWLSLFLHAGQVTLILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLAS 777
           +++RL   + LH G    I H   +     +V   +E++ G  R  +IYL +G+TG++AS
Sbjct: 221 EWWRLLTPIVLHIG----IAHLAFNTLALWSVGTAVERMYGSGRFLLIYLAAGITGSIAS 276

Query: 778 AIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRXXXXXXXXXXXXXXXXXXPWI 837
            +F PY    G +G+ FG L  L      + ++  R                       I
Sbjct: 277 FVFSPY-PSAGASGAIFGCLGALLYVALSNRKMFLRTIGTNIIVIIIINLGFGFAVSN-I 334

Query: 838 DNFAHISGFISGLFLSFAF-LPYI-SFGK 864
           DN  HI G I G F + A  LP   +FGK
Sbjct: 335 DNSGHIGGLIGGFFAAAALGLPKAGAFGK 363



>gi|59800189|sp|Q9NX52|RHBD2_HUMAN   Rhomboid-related protein 2 (RRP2) (Rhomboid-like protein 2)
          Length = 303

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 5/102 (4%)

Query: 709 PFL-NPEVPDQFYRLWLSLFLHAGQVTLILHCLVSICFQMTVLRDLEKLAGWHRIAIIYL 767
           PF+ +PE  ++ +R    + +HAG    + H L ++C Q+ +   LE +    R+ ++YL
Sbjct: 109 PFIYSPEKREEAWRFISYMLVHAG----VQHILGNLCMQLVLGIPLEMVHKGLRVGLVYL 164

Query: 768 LSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQ 809
              + G+LAS+IF P R  VG +G  + ++   F+ +  ++Q
Sbjct: 165 AGVIAGSLASSIFDPLRYLVGASGGVYALMGGYFMNVLVNFQ 206



>gi|21542300|sp|P58872|RHB4_HUMAN   Rhomboid-related protein 4 (Ventrhoid transmembrane protein)
          Length = 404

 Score = 42.7 bits (99), Expect = 0.004
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 712 NPEVPDQFYRLWLSLFLHAGQVTLILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGV 771
           +P++  Q +R    +F+HAG    I H  +++  Q+ V   LE + G  RI ++Y+   V
Sbjct: 204 HPQLRAQVWRYLTYIFMHAG----IEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVV 259

Query: 772 TGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSW 808
            G+LA ++       VG +G  + +++     +  +W
Sbjct: 260 AGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVMNW 296



>gi|21542301|sp|P58873|RHB4_MOUSE   Rhomboid-related protein 4 (Ventrhoid transmembrane protein)
          Length = 404

 Score = 40.0 bits (92), Expect = 0.029
 Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 4/97 (4%)

Query: 712 NPEVPDQFYRLWLSLFLHAGQVTLILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGV 771
           +P++  Q +R    +F+HAG   L L+    +  Q+ V   LE + G  RI ++Y+   V
Sbjct: 204 HPQLRAQAWRYVTYIFMHAGVEQLGLN----VALQLLVGVPLEMVHGATRIGLVYVAGVV 259

Query: 772 TGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSW 808
            G+LA ++       VG +G  + +++     +  +W
Sbjct: 260 AGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVMNW 296



>gi|54036334|sp|Q19821|ROM1_CAEEL   Rhomboid related protein 1
          Length = 356

 Score = 39.7 bits (91), Expect = 0.038
 Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 12/153 (7%)

Query: 713 PEVPDQFYRLWLSLFLHAGQVTLILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVT 772
           P++  + +R    +FLHAG    + H L ++  Q+ V   LE      RI  IYLL+  +
Sbjct: 160 PKLRGEAWRFTSYMFLHAG----LNHLLGNVIIQLLVGIPLEVAHKIWRIGPIYLLAVTS 215

Query: 773 GNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPW--------RXXXXXXXX 824
           G+L      P    VG +   + ++      +  +W  +   W                 
Sbjct: 216 GSLLQYAIDPNSLLVGASAGVYALIFAHVANVILNWHEMPLRWIRVLVLFVFIFLDFGGA 275

Query: 825 XXXXXXXXXXPWIDNFAHISGFISGLFLSFAFL 857
                       + + AHI+G ++GLF  +  L
Sbjct: 276 IHRRFYTNDCDSVSHLAHIAGAVTGLFFGYVVL 308



>gi|20137251|sp|Q9UM73|ALK_HUMAN   ALK tyrosine kinase receptor precursor (Anaplastic lymphoma kinase)
           (CD246 antigen)
          Length = 1620

 Score = 38.1 bits (87), Expect = 0.11
 Identities = 20/80 (25%), Positives = 39/80 (48%)

Query: 154 SDSTQKWQRKSIRHCSQRYGKLKPQVLRELDLPSQDNVSLTSTETPPPLYVGPCQLGMQK 213
           S  T +WQ ++++    +  +    +L   D+P+ ++ ++TS   P P+   PC+L M  
Sbjct: 495 SPHTPQWQVRTLKDARFQDHQDHALLLSTTDVPASESATVTSATFPAPIKSSPCELRMSW 554

Query: 214 IIDPLARGRAFRVADDTAEG 233
           +I  + RG    V  +   G
Sbjct: 555 LIRGVLRGNVSLVLVENKTG 574



>gi|1345843|sp|P07141|CSF1_MOUSE   Macrophage colony stimulating factor-1 precursor (CSF-1) (MCSF)
          Length = 552

 Score = 37.4 bits (85), Expect = 0.19
 Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 4/116 (3%)

Query: 304 SFLEEDTTDFPDELDTSFF---AREGILHEELST-YPDEVFESPSEAALKDWEKAPEQAD 359
           + LE+D   F    + SF    +R+ +   + +  YP     S   +A      AP  A 
Sbjct: 158 NLLEKDWNIFTKNCNNSFAKCSSRDVVTKPDCNCLYPKATPSSDPASASPHQPPAPSMAP 217

Query: 360 LTGGALDRSELERSHLMLPLERGWRKQKEGAAAPQPKVRLRQEVVSTAGPRRGQRI 415
           L G A D S+      +LP E   R +  G+A  +P     Q + ST  P  G R+
Sbjct: 218 LAGLAWDDSQRTEGSSLLPSELPLRIEDPGSAKQRPPRSTCQTLESTEQPNHGDRL 273



>gi|20137202|sp|P97793|ALK_MOUSE   ALK tyrosine kinase receptor precursor (Anaplastic lymphoma kinase)
          Length = 1621

 Score = 35.8 bits (81), Expect = 0.55
 Identities = 19/81 (23%), Positives = 37/81 (45%)

Query: 159 KWQRKSIRHCSQRYGKLKPQVLRELDLPSQDNVSLTSTETPPPLYVGPCQLGMQKIIDPL 218
           +WQ +++R    +  + +  +L   D+ + +  ++TS   P P+   PC+L M  +I  +
Sbjct: 504 RWQVRTLRDAHSQGHQGRALLLSTTDILASEGATVTSATFPAPMKNSPCELRMSWLIRGV 563

Query: 219 ARGRAFRVADDTAEGLSAPHT 239
            RG    V  +   G     T
Sbjct: 564 LRGNVSLVLVENKTGKEQSRT 584



>gi|30912753|sp|Q9VX09|ARP8_DROME   Probable actin-related protein 8
          Length = 607

 Score = 35.0 bits (79), Expect = 0.93
 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 23/85 (27%)

Query: 1  MSEARRDSTSSLQRKKPPWLKLDIPSAVPLTAEEPSFLQVGPGLQGLWV----------- 49
          M  +R  STSS +   PP + L  P A PL  E P  + + PG Q L +           
Sbjct: 1  MQRSRASSTSSGRHPAPPPIGLPQPQAQPL--EAPKIIVIHPGSQHLRIGRAADLNPLTL 58

Query: 50 -PPVQY---------PHHDPVAQPL 64
             V Y         PHHDP+  PL
Sbjct: 59 LHAVAYRRRPGASDRPHHDPLLPPL 83



>gi|20141697|sp|P20350|RHOM_DROME   Rhomboid protein (Veinlet protein)
          Length = 355

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 16/152 (10%)

Query: 718 QFYRLWLSLFLHAGQVTLILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLAS 777
           Q +R +  +FLHA    L  + ++ + F +     LE + G  RI +IY+     G+L +
Sbjct: 149 QVWRFFSYMFLHANWFHLGFNIVIQLFFGIP----LEVMHGTARIGVIYMAGVFAGSLGT 204

Query: 778 AIFLPYRAEVGPAGSQFGILACLFVELFQSWQ------------ILARPWRXXXXXXXXX 825
           ++       VG +G  + +LA     +  ++             ++              
Sbjct: 205 SVVDSEVFLVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYALYTQY 264

Query: 826 XXXXXXXXXPWIDNFAHISGFISGLFLSFAFL 857
                    P +   AH++G ++GL + F  L
Sbjct: 265 FDGSAFAKGPQVSYIAHLTGALAGLTIGFLVL 296



>gi|12644166|sp|P22987|KIN1_SCHPO   Protein kinase kin1
          Length = 891

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 28/85 (32%), Positives = 33/85 (38%), Gaps = 11/85 (12%)

Query: 26  SAVPLTAEEPSFLQVGPGLQGLWVPPVQYPHHDPVAQPLRRQAFLRSVSMPAETAHISSP 85
           S  P +A EP  L   PG      P  Q PHH PV  P  R+    S S   +       
Sbjct: 48  STQPKSAVEPLGLSFSPGYIS---PSSQSPHHGPVRSPSSRKPLPASPSRTRD------- 97

Query: 86  HHELRRPVLQRQTSITQTIRSSRQV 110
            H LR PV     S  +  R  R+V
Sbjct: 98  -HSLRVPVSGHSYSADEKPRERRKV 121



>gi|12643312|sp|O15165|C181_HUMAN   Protein C18orf1
          Length = 306

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 171 RYGKLKPQVLRELDLPSQDNVSLTSTETPPPLYVGPCQLGMQ 212
           R+    P V  E+DLP    +SL+  E PPP Y GPC L ++
Sbjct: 154 RFQPTYPYVQHEIDLPP--TISLSDGEEPPP-YQGPCTLQLR 192



>gi|20139374|sp|O75783|RHB1_HUMAN   Rhomboid-related protein 1 (RRP) (Rhomboid-like protein 1)
          Length = 438

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 720 YRLWLSLFLHAGQVTLILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAI 779
           +R    +F+H G   L  + L+    Q+ +   LE + G  RI+++YL   + G+L  +I
Sbjct: 246 WRFLTYMFMHVGLEQLGFNALL----QLMIGVPLEMVHGLLRISLLYLAGVLAGSLTVSI 301

Query: 780 FLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWR 816
                  VG +G  + + +     +  +W  +  P++
Sbjct: 302 TDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYK 338



>gi|39931686|sp|O74502|MSH6_SCHPO   DNA mismatch repair protein msh6
          Length = 1254

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 44/171 (25%), Positives = 68/171 (39%), Gaps = 33/171 (19%)

Query: 295 AQRRSFTPASFLEEDTTDFPDELDTSFFAREGILHEELS---TYPDEVFESPSEAAL--K 349
           A RRS  P S+ E D  +  D+  T     + I+ ++ S     PD + E+ SEA+L   
Sbjct: 192 ASRRSRKPVSYAESDEDEDFDDAPTKGSRHKRIVSDDESDDYVEPDHISEASSEASLPID 251

Query: 350 DWEKAPEQADLTGGALDRSELERSHLMLPLERGWRKQKEGAAAPQPKVRLRQEVVST--A 407
           + E   E  D                      G+       AAP PK   R+E  ++   
Sbjct: 252 EVESMDEDVD----------------------GYSDHSVSVAAPIPKKESRKESSNSLYE 289

Query: 408 GPRRGQRIAVPVRKL--FAREKRPYGLGMVGRLTNRTYRKRIDSFVKRQIE 456
             R G +IA P   +   A   +    G++ R   R  R+R+++F K   E
Sbjct: 290 SYRLGSQIASPSPSVSGSASPTKSNKNGVLNREEKR--RQRMEAFKKENNE 338



>gi|136124|sp|P03008|TNP3_ECOLI   Transposase for transposon Tn3
          Length = 1015

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 38/206 (18%)

Query: 285 RSVRDGTFRR--AQRRSFTPASFLEEDTTDF--------PDELDTSFFAREGILHEELST 334
           R++  G  R+     R  T  +F+ +  + F        P  L  S F  EG+L +E   
Sbjct: 709 RTINAGPNRKYFGNNRGITWYNFVSDQYSGFHGFHGIVIPGTLRDSIFVLEGLLEQETGL 768

Query: 335 YPDEVFESPSEAA--------LKDWEKAPEQADLTGGALDRSELERSHLMLPLERGWRKQ 386
            P E+    + A+        L  ++ +P  AD       R + +  + +L         
Sbjct: 769 NPTEIMTDTAGASDLVFGLFWLLGYQFSPRLADAGASVFWRMDHDADYGVL------NDI 822

Query: 387 KEGAAAPQPKVRLRQEVVSTAGPRRGQRI--AVPVRKLFAREKRPYGLGM----VGRLTN 440
             G + P+  V    E++ TAG  +  ++  +V VR L  + +RP GL      VGR+  
Sbjct: 823 ARGQSDPRKIVLQWDEMIRTAGSLKLGKVQASVLVRSLL-KSERPSGLTQAIIEVGRINK 881

Query: 441 RTYRKRIDSFVKRQIEDMDDHRPFFT 466
             Y       +   I+D D  R   T
Sbjct: 882 TLY-------LLNYIDDEDYRRRILT 900



>gi|21542217|sp|Q8VC82|RHB1_MOUSE   Rhomboid-related protein 1 (RRP) (Rhomboid-like protein 1)
          Length = 373

 Score = 32.7 bits (73), Expect = 4.6
 Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 720 YRLWLSLFLHAGQVTLILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAI 779
           +R    +F+H G   L  + L+    Q+ +   LE + G  RI+++YL   + G+L  +I
Sbjct: 181 WRFLTYMFMHVGLEQLGFNALL----QLMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSI 236

Query: 780 FLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWR 816
                  VG +G  + + +     +  +W  +  P++
Sbjct: 237 TDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYK 273



>gi|32469763|sp|Q91VW5|GOA4_MOUSE   Golgi autoantigen, golgin subfamily A member 4 (tGolgin-1)
          Length = 2238

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)

Query: 341 ESPSEAALKDWEKAPEQADLTGGALDRSELERSHLMLPLERGWRKQKEGAAAPQPKVRLR 400
           E    AA ++ EKA   A  T  A  R ++E    M  +ER    ++E         R+R
Sbjct: 426 EKSERAAFEELEKALSTAQKTEDAQRRMKMEMDEQMKAVERA--SEEERLRLQHELSRVR 483

Query: 401 QEVVSTAGPRRGQRIAVPVRKLFARE 426
           QE  S A     +++A  ++KL A E
Sbjct: 484 QEAASMAKKNSEEQVAA-LQKLHAEE 508



>gi|20140695|sp|Q969W9|TMEP_HUMAN   Transmembrane prostate androgen-induced protein (Solid
           tumor-associated 1 protein)
          Length = 287

 Score = 32.0 bits (71), Expect = 7.9
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 171 RYGKLKPQVLRELDLPSQDNVSLTSTETPPPLYVGPCQLGMQ 212
           R+    P +  E+DLP    +SL+  E PPP Y GPC L ++
Sbjct: 132 RFQPTYPYLQHEIDLPP--TISLSDGEEPPP-YQGPCTLQLR 170



>gi|59798544|sp|Q6MTE4|SYG_MYCMS   Glycyl-tRNA synthetase (Glycine--tRNA ligase) (GlyRS)
          Length = 456

 Score = 32.0 bits (71), Expect = 7.9
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 8/61 (13%)

Query: 425 REKRPYGLGMVGR-----LTNRTYRKRIDSFVKRQIE---DMDDHRPFFTYWLTFVHSLV 476
           R+K P+G+G +G+     +T   +  R   F + ++E   D  D + +F YWL  +   +
Sbjct: 185 RKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFFDPSDQKDWFKYWLDQIELFL 244

Query: 477 T 477
           T
Sbjct: 245 T 245



>gi|30913024|sp|Q8LK56|DME_ARATH   Transcriptional activator DEMETER (DNA glycosylase-related protein
           DME)
          Length = 1729

 Score = 32.0 bits (71), Expect = 7.9
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 38/146 (26%)

Query: 441 RTYRKRIDSFVKRQIEDMDDHRPFFTYWLTFVHSLVTILAVCIYGIAPVGFSQHETVDSV 500
           R +R R DSF+ R      D R                        +P   S  ++V  V
Sbjct: 737 RVFRGRADSFIARMHLVQGDRR-----------------------FSPWKGSVVDSVIGV 773

Query: 501 LRNRGVYENVKYEALIHLGAKFSPCMRQDPQVHSFIRSAREREKHSACCVRNDRSGCVQT 560
              + V +++   A + L A+F P +           S+RE E++    V  D  GC+  
Sbjct: 774 FLTQNVSDHLSSSAFMSLAARFPPKLS----------SSREDERNVRSVVVEDPEGCILN 823

Query: 561 SEEECSSTLAVWVKWPIHPSAPELAG 586
             E     +  W +   HPS  E++G
Sbjct: 824 LNE-----IPSWQEKVQHPSDMEVSG 844






  Database: Non-redundant SwissProt sequences
    Posted date:  Mar 15, 2005 10:11 AM
  Number of letters in database: 60,490,055
  Number of sequences in database:  164,271
  
Lambda     K      H
   0.323    0.137    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,778,753
Number of Sequences: 164271
Number of extensions: 833213
Number of successful extensions: 1673
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1673
Number of HSP's gapped (non-prelim): 0
length of query: 925
length of database: 60,490,055
effective HSP length: 119
effective length of query: 806
effective length of database: 40,941,806
effective search space: 32999095636
effective search space used: 32999095636
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 71 (32.0 bits)