RID=1111069169-15683-196313243297.BLASTQ4, FGENESH: 26 3 exon (s) 414681

BLASTP 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
RID: 1111069169-15683-196313243297.BLASTQ4
Query= FGENESH: 26 3 exon (s) 414681 - 417229 228 aa, chain + (228 letters)
Database: Non-redundant SwissProt sequences 164,271 sequences; 60,490,055 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Taxonomy reports
Distribution of 88 Blast Hits on the Query Sequence


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14424221|sp|O75154|EFER_HUMAN  Rab11 family-interacting p...   256   3e-68 
gi|32363201|sp|Q8K4J6|MRTFA_MOUSE  Myocardin-related transcr...    35   0.11  
gi|139233|sp|P10210|VP40_HHV11  Capsid protein P40 (Virion s...    35   0.19  
gi|39931291|sp|Q8FXT2|IF2_BRUSU  Translation initiation fact...    35   0.19  
gi|39931298|sp|Q8YEB3|IF2_BRUME  Translation initiation fact...    35   0.19  
gi|1711407|sp|P51532|SMCA4_HUMAN  Possible global transcript...    34   0.25  
gi|399202|sp|Q02343|CAC1E_RABIT  Voltage-dependent R-type ca...    34   0.33  
gi|19862533|sp|Q04892|SOX14_MOUSE  Transcription factor SOX-14     33   0.43  
gi|26006814|sp|Q9ULD8|KCH3_HUMAN  Potassium voltage-gated ch...    33   0.43  
gi|51315819|sp|O94989|ARHF_HUMAN  Rho guanine nucleotide exc...    33   0.43  
gi|47117085|sp|P61259|SOX14_MACFA  Transcription factor SOX-...    33   0.57  
gi|1703194|sp|P51825|AF4_HUMAN  AF-4 protein (Proto-oncogene...    33   0.74  
gi|12643733|sp|Q16799|RTN1_HUMAN  Reticulon 1 (Neuroendocrin...    32   0.96  
gi|45477003|sp|Q9JIK1|MCDL_RAT  Mucin and cadherin-like prot...    32   0.96  
gi|26006813|sp|Q9TSZ3|KCH2_CANFA  Potassium voltage-gated ch...    32   0.96  
gi|12643900|sp|Q9UMN6|MLL4_HUMAN  Myeloid/lymphoid or mixed-...    32   1.3   
gi|1168696|sp|P43187|ALLB3_BETVE  Calcium-binding allergen B...    32   1.3   
gi|14194426|sp|Q9QYV0|ADA15_RAT  ADAM 15 precursor (A disint...    32   1.3   
gi|119714|sp|P13983|EXTN_TOBAC  Extensin precursor (Cell wal...    32   1.6   
gi|21431749|sp|P41987|CXA3_BOVIN  Gap junction alpha-3 prote...    32   1.6   
gi|37999853|sp|Q96JG9|ZN469_HUMAN  Zinc finger protein 469         32   1.6   
gi|22001988|sp|Q9Y566|SHK1_HUMAN  SH3 and multiple ankyrin r...    31   2.1   
gi|14285349|sp|Q9HEV5|ASD4_NEUCR  GATA type zinc finger prot...    31   2.1   
gi|22001841|sp|Q14761|PTCA_HUMAN  Protein tyrosine phosphata...    31   2.8   
gi|23822331|sp|Q96KM6|Y1196_HUMAN  Hypothetical zinc finger ...    31   2.8   
gi|57015419|sp|Q9ULC8|ZDHC8_HUMAN  Zinc finger DHHC domain-c...    31   2.8   
gi|41017595|sp|O95153|RIP1_HUMAN  Peripheral-type benzodiaze...    31   2.8   
gi|141452|sp|P20190|YT55_STRFR  Hypothetical protein in tran...    31   2.8   
gi|5902695|sp|O77715|ADA2B_DIDMA  Alpha-2B adrenergic recept...    31   2.8   
gi|46395989|sp|Q9H1U4|EFL5_HUMAN  Multiple EGF-like-domain p...    31   2.8   
gi|130896|sp|P06186|PRGR_RABIT  Progesterone receptor (PR)         30   3.7   
gi|117761|sp|P13627|CY1_PARDE  Cytochrome c1 precursor             30   3.7   
gi|2493782|sp|Q28084|CA34_BOVIN  Collagen alpha 3(IV) chain        30   3.7   
gi|55976503|sp|Q84L31|R233_ARATH  Putative DNA repair protei...    30   3.7   
gi|18203330|sp|Q9NZM4|GSR1_HUMAN  Glioma tumor suppressor ca...    30   3.7   
gi|24638225|sp|Q9W7R6|SOX14_CHICK  Transcription factor SOX-14     30   3.7   
gi|29336893|sp|Q96DN6|MBD6_HUMAN  Methyl-CpG-binding domain ...    30   3.7   
gi|41017813|sp|Q9X6Y1|RPOB_AQUPY  DNA-directed RNA polymeras...    30   3.7   
gi|59800452|sp|O36027|WSP1_SCHPO  Wiskott-Aldrich syndrome h...    30   3.7   
gi|8247928|sp|Q61572|FOXC1_MOUSE  Forkhead box protein C1 (F...    30   3.7   
gi|32363203|sp|Q9ULH7|MRTFB_HUMAN  Myocardin-related transcr...    30   3.7   
gi|45644997|sp|P39060|CA1H_HUMAN  Collagen alpha 1(XVIII) ch...    30   3.7   
gi|131104|sp|P02630|PRVA_RAJCL  Parvalbumin alpha                  30   4.8   
gi|17366642|sp|Q99704|DOK1_HUMAN  Docking protein 1 (p62(dok...    30   4.8   
gi|28202247|sp|P98174|FGD1_HUMAN  Putative Rho/Rac guanine n...    30   4.8   
gi|45593475|sp|Q12851|M4K2_HUMAN  Mitogen-activated protein ...    30   4.8   
gi|2499636|sp|Q24324|DSOR1_DROME  Dual specificity mitogen-a...    30   4.8   
gi|7387896|sp|Q48919|APA_MYCAV  Alanine and proline-rich sec...    30   4.8   
gi|55735519|sp|Q6UWL6|KIR2_HUMAN  Kin of IRRE-like protein 2...    30   4.8   
gi|29337157|sp|Q9Z1J1|TF7L1_MOUSE  Transcription factor 7-li...    30   4.8   
gi|47116569|sp|Q96P26|5NIB_HUMAN  Cytosolic 5'-nucleotidase ...    30   4.8   
gi|462387|sp|P33479|IE18_PRVKA  Immediate-early protein IE180      30   4.8   
gi|41688799|sp|Q9Y3S1|WNK2_HUMAN  Serine/threonine-protein k...    30   4.8   
gi|41688772|sp|Q80UE6|WNK4_MOUSE  Serine/threonine-protein k...    30   4.8   
gi|29429203|sp|P54259|DRPLA_HUMAN  Atrophin-1 (Dentatorubral...    30   4.8   
gi|6165988|sp|Q15878|CAC1E_HUMAN  Voltage-dependent R-type c...    30   4.8   
gi|38372873|sp|O88839|ADA15_MOUSE  ADAM 15 precursor (A disi...    30   4.8   
gi|22096343|sp|P34804|COL40_CAEEL  Cuticle collagen 40             30   4.8   
gi|55976772|sp|Q9NWS9|ZN446_HUMAN  Zinc finger protein 446         30   6.3   
gi|1729810|sp|P49848|TAF6_HUMAN  Transcription initiation fa...    30   6.3   
gi|124336|sp|P16382|IL4R_MOUSE  Interleukin-4 receptor alpha...    30   6.3   
gi|584708|sp|P38479|ABP1_SACEX  ACTIN BINDING PROTEIN              30   6.3   
gi|115523|sp|P05933|CALM_SCHPO  Calmodulin (CaM)                   30   6.3   
gi|39931686|sp|O74502|MSH6_SCHPO  DNA mismatch repair protei...    30   6.3   
gi|56749106|sp|Q63755|PRDM2_RAT  PR-domain zinc finger prote...    30   6.3   
gi|29337134|sp|Q9HCS4|TF7L1_HUMAN  Transcription factor 7-li...    30   6.3   
gi|12643930|sp|Q9WU42|NCOR2_MOUSE  Nuclear receptor corepres...    30   6.3   
gi|12644294|sp|P49869|HR38_DROME  Probable nuclear hormone r...    30   6.3   
gi|1706790|sp|P52734|FGD1_MOUSE  Putative Rho/Rac guanine nu...    30   6.3   
gi|57013028|sp|O00204|ST2B1_HUMAN  Sulfotransferase family c...    29   8.2   
gi|13124808|sp|P18431|SGG_DROME  Protein kinase shaggy (Prot...    29   8.2   
gi|12644391|sp|Q08050|FOXM1_HUMAN  Forkhead box protein M1 (...    29   8.2   
gi|127109|sp|P03971|MIS_HUMAN  Muellerian inhibiting factor ...    29   8.2   
gi|3024673|sp|Q63801|TAF6_RAT  Transcription initiation fact...    29   8.2   
gi|3024691|sp|Q62311|TAF6_MOUSE  Transcription initiation fa...    29   8.2   
gi|1345923|sp|P32927|CYRB_HUMAN  Cytokine receptor common be...    29   8.2   
gi|34395521|sp|Q61210|ARH1_MOUSE  Rho guanine nucleotide exc...    29   8.2   
gi|29840772|sp|Q9JKA8|HCN3_RAT  Potassium/sodium hyperpolari...    29   8.2   
gi|24211543|sp|Q9UJ99|CADM_HUMAN  Cadherin-22 precursor            29   8.2   
gi|17368963|sp|Q9H9D4|ZN408_HUMAN  Zinc finger protein 408 (...    29   8.2   
gi|2494484|sp|Q12778|FOXO1_HUMAN  Forkhead box protein O1A (...    29   8.2   
gi|14423843|sp|O64943|POLC2_JUNOX  Polcalcin Jun o 2 (Calciu...    29   8.2   
gi|3023274|sp|Q26768|AGI6_TRYBB  I/6 AUTOANTIGEN                   29   8.2   
gi|9910676|sp|O08696|FOXM1_MOUSE  Forkhead box protein M1 (F...    29   8.2   
gi|59803105|sp|Q99687|MEIS3_HUMAN  Homeobox protein Meis3 (M...    29   8.2   
gi|26006805|sp|Q8WNY2|KCNH2_RABIT  Potassium voltage-gated c...    29   8.2   
gi|41017299|sp|Q14767|LTB2_HUMAN  Latent transforming growth...    29   8.2   


Alignments

>gi|14424221|sp|O75154|EFER_HUMAN   Rab11 family-interacting protein 3 (Rab11-FIP3) (EF
           hands-containing Rab-interacting protein) (Eferin)
          Length = 756

 Score =  256 bits (654), Expect = 3e-68
 Identities = 125/133 (93%), Positives = 127/133 (95%), Gaps = 1/133 (0%)

Query: 25  ELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQG 84
           ELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQG
Sbjct: 118 ELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQG 177

Query: 85  PGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDGFVRIEDFIQFATVYGAE 144
           PGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDGFVRIEDFIQFATVYGAE
Sbjct: 178 PGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDGFVRIEDFIQFATVYGAE 237

Query: 145 QL-DLTEVSSSPG 156
           Q+ DLT+     G
Sbjct: 238 QVKDLTKYLDPSG 250



>gi|32363201|sp|Q8K4J6|MRTFA_MOUSE   Myocardin-related transcription factor A (MRTF-A) (Megakaryoblastic
           leukemia 1 protein homolog) (Basic SAP coiled-coil
           transcription activator)
          Length = 964

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 38/141 (26%), Positives = 52/141 (36%), Gaps = 12/141 (8%)

Query: 69  SPFPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDGF 128
           SP P P A ++ LE     PPQP   + T  L  EP G +E   +          +G   
Sbjct: 728 SPAPGPPA-QMDLEH----PPQPPFATPTSLLKKEPPGYEETVTQQ----PKQQENGSSS 778

Query: 129 VRIEDFIQFATVYGAEQLDLTEVSSSPG--DTPPGGLIATPPGCLIDVPLNEEVPRDSPT 186
             ++D        G    D  E  S PG   +PP      PP      PL+ E+P+ +P 
Sbjct: 779 QHMDDLFDILIQSGEISADFKEPPSLPGKEKSPPAAAAYGPPLTPQPSPLS-ELPQAAPP 837

Query: 187 RGPRYCSAEFTQVLAAEARLP 207
            G           L +   LP
Sbjct: 838 PGSPTLPGRLEDFLESSTGLP 858



>gi|139233|sp|P10210|VP40_HHV11   Capsid protein P40 (Virion structural protein UL26) [Contains:
           UL26.5 protein; Capsid protein VP24 (Assemblin)
           (Protease); Capsid protein VP22A]
          Length = 635

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 11/89 (12%)

Query: 35  EPEECGPASCPESAPFRLQGSSSSHRA-RGEVDVFSPFPAPTAGELALEQGPGSPPQPSD 93
           EP    PA CP  A +R    S+ +   +G     S  P P     A   GP  PP PS 
Sbjct: 520 EPTTTHPALCPPEAVYRPPPHSAPYGPPQGPA---SHAPTPPYAPAACPPGPPPPPCPST 576

Query: 94  LSQTHPLPSEP------VGSQEDGPRLRA 116
            ++  PLP+EP       GSQ +     A
Sbjct: 577 QTRA-PLPTEPAFPPAATGSQPEASNAEA 604



>gi|39931291|sp|Q8FXT2|IF2_BRUSU   Translation initiation factor IF-2
          Length = 959

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 36  PEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPT-AGELALEQGPGSPPQPSDL 94
           P+   PA+ P+ AP     S+S+ +A       +P PAP  A        P +P     +
Sbjct: 67  PKPAAPAAAPQQAPASAPVSASAAQAS------APQPAPVKAPATKAPAAPSAPVTKPHV 120

Query: 95  SQTHPLPSEPVGSQEDGPR 113
           +Q  P+   P G Q   PR
Sbjct: 121 AQQRPVHQRPGGQQAQRPR 139



>gi|39931298|sp|Q8YEB3|IF2_BRUME   Translation initiation factor IF-2
          Length = 959

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 36  PEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPT-AGELALEQGPGSPPQPSDL 94
           P+   PA+ P+ AP     S+S+ +A       +P PAP  A        P +P     +
Sbjct: 67  PKPAAPAAAPQQAPASAPVSASAAQAS------APQPAPVKAPATKAPAAPSAPVTKPHV 120

Query: 95  SQTHPLPSEPVGSQEDGPR 113
           +Q  P+   P G Q   PR
Sbjct: 121 AQQRPVHQRPGGQQAQRPR 139



>gi|1711407|sp|P51532|SMCA4_HUMAN   Possible global transcription activator SNF2L4 (SNF2-beta) (BRG-1
           protein) (Mitotic growth and transcription activator)
           (Brahma protein homolog 1) (SWI/SNF related matrix
           associated actin dependent regulator of chromatin
           subfamily A member 4)
          Length = 1647

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 4/88 (4%)

Query: 27  DPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAP-TAGELALEQGP 85
           DP    T  P   GP+  P  +P  + G S          +  P P P +AG     QGP
Sbjct: 5   DPPLGGTPRP---GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGP 61

Query: 86  GSPPQPSDLSQTHPLPSEPVGSQEDGPR 113
           G  PQ +      P+ S       D PR
Sbjct: 62  GGYPQDNMHQMHKPMESMHEKGMSDDPR 89



>gi|399202|sp|Q02343|CAC1E_RABIT   Voltage-dependent R-type calcium channel alpha-1E subunit
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2259

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 22/83 (26%), Positives = 36/83 (43%)

Query: 22   RHRELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELAL 81
            RH    P    ++ P   G  S  ES+   +  +S+   +R ++    P P P     +L
Sbjct: 2063 RHPSRSPSEGRSQSPSRQGTGSLSESSIPSVSDTSTPRHSRRQLPPVPPKPRPLLSYSSL 2122

Query: 82   EQGPGSPPQPSDLSQTHPLPSEP 104
            +Q P +   P+D SQ   L + P
Sbjct: 2123 KQQPSNFSPPADGSQGGSLLASP 2145



>gi|19862533|sp|Q04892|SOX14_MOUSE   Transcription factor SOX-14
          Length = 240

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 36  PEECGPASCPESAPFRL----QGSSSSHRARGEVD-VFSPFPAPTAGELALEQGP-GSPP 89
           PE+      P SAP+ L    Q SSS+ +  GEV    +    P A  L  + G  GS  
Sbjct: 122 PEKARAFLPPASAPYSLLDPAQFSSSAIQKMGEVPHTLATSALPYASTLGYQNGAFGSLS 181

Query: 90  QPSDLSQTHPLPSEP 104
            PS  + THP P+ P
Sbjct: 182 CPSQHTHTHPSPTNP 196



>gi|26006814|sp|Q9ULD8|KCH3_HUMAN   Potassium voltage-gated channel subfamily H member 3 (Voltage-gated
           potassium channel subunit Kv12.2) (Ether-a-go-go like
           potassium channel 2) (ELK channel 2) (ELK2)
           (Brain-specific eag-like channel 1) (BEC1)
          Length = 1083

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 44/158 (27%), Positives = 57/158 (36%), Gaps = 30/158 (18%)

Query: 29  LFSWTEEPE---ECGPASCPE-----SAPFRLQGSSSSHRARGEVDVFSPFPAPT----- 75
           L S  EE E   E GP   P      S+P    G +SS  A   +      P P      
Sbjct: 724 LMSTLEEKETDGEQGPTVSPAPADEPSSPLLSPGCTSSSSAAKLLSPRRTAPRPRLGGRG 783

Query: 76  ----AGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDGFVRI 131
               AG L  E GP +PP+  +  +  P+P       +  PR+      +DG  DG    
Sbjct: 784 RPGRAGALKAEAGPSAPPRALEGLRLPPMPWNV--PPDLSPRV------VDGIEDGCGSD 835

Query: 132 EDFIQFATVYGAEQLDLTEVSSSPGDTPPGGLIATPPG 169
           +    F            E SSSP   P  GL+  P G
Sbjct: 836 QPKFSFRVGQSG-----PECSSSPSPGPESGLLTVPHG 868



>gi|51315819|sp|O94989|ARHF_HUMAN   Rho guanine nucleotide exchange factor 15 (Vsm-RhoGEF)
          Length = 841

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 38/139 (27%), Positives = 50/139 (35%), Gaps = 10/139 (7%)

Query: 41  PASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQTHPL 100
           PA  P SA      S +S  +       SP    +A      + P  PP+PS    T  L
Sbjct: 73  PALLPPSASRASLDSQTSPDSPSSTPTPSPVSRRSASPEPAPRSPVPPPKPSGSPCTPLL 132

Query: 101 PSEPV----GSQEDGPRLRAVFDALDGDGDGFVRIEDFIQ-----FATVYGAEQLDLTEV 151
           P   V    GS      +R +    +G  +G  +  D  +      A V G  +  LT  
Sbjct: 133 PMAGVLAQNGSASAPGTVRRLAGRFEGGAEGRAQDADAPEPGLQARADVNGEREAPLTGS 192

Query: 152 SSSPGDTPPGGLIATPPGC 170
            S     P  GL A PP C
Sbjct: 193 GSQENGAPDAGL-ACPPCC 210



>gi|47117085|sp|P61259|SOX14_MACFA   Transcription factor SOX-14 (QtrA-14282)
 gi|6831689|sp|O95416|SOX14_HUMAN   Transcription factor SOX-14
          Length = 240

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 36  PEECGPASCPESAPFRL----QGSSSSHRARGEVD-VFSPFPAPTAGELALEQGP-GSPP 89
           PE+      P SAP+ L    Q SSS+ +  GEV    +    P A  L  + G  GS  
Sbjct: 122 PEKARAFLPPASAPYSLLDPAQFSSSAIQKMGEVPHTLATGALPYASTLGYQNGAFGSLS 181

Query: 90  QPSDLSQTHPLPSEP 104
            PS  + THP P+ P
Sbjct: 182 CPSQHTHTHPSPTNP 196



>gi|1703194|sp|P51825|AF4_HUMAN   AF-4 protein (Proto-oncogene AF4) (FEL protein)
          Length = 1210

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 8/112 (7%)

Query: 18  TGTPRHRELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAG 77
           T +   REL PL S         P    +    R QGSS  H +      + P  +P   
Sbjct: 190 TDSAPERELSPLISLPSPVPPLSPIHSNQQTLPRTQGSSKVHGSSNNSKGYCPAKSPK-- 247

Query: 78  ELALEQGPGSPPQPSDL------SQTHPLPSEPVGSQEDGPRLRAVFDALDG 123
           +LA++      PQ S +      SQT P PS P  S     +  A    +DG
Sbjct: 248 DLAVKVHDKETPQDSLVAPAQPPSQTFPPPSLPSKSVAMQQKPTAYVRPMDG 299



>gi|12643733|sp|Q16799|RTN1_HUMAN   Reticulon 1 (Neuroendocrine-specific protein)
          Length = 776

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 46/179 (25%), Positives = 65/179 (36%), Gaps = 31/179 (17%)

Query: 45  PESAPFRLQGSSSS---HRARGEVDVFSP---FPAPTAGELALEQGPGSPPQPSDLSQTH 98
           P+     L G  S    HR  GE +  +P    PAP AGE +   G  +    S  + + 
Sbjct: 7   PQDELLPLAGPGSQWLRHRGEGENEAVTPKGATPAPQAGEPSPGLGARAREAASREAGSG 66

Query: 99  PLPSEPVGSQEDGPRLRAVFDAL---------DGDGDGFVRI---------EDFIQFATV 140
           P    PV  +     +  V  A+         DG+G  +  +         ED   F  +
Sbjct: 67  PARQSPVAMETASTGVAGVSSAMDHTFSTTSKDGEGSCYTSLISDICYPPQEDSTYFTGI 126

Query: 141 YGAEQLDLTEVSSSPGDTPPGGLIATPPGCLIDVPLNEEVPRDSPTRGPRYCSAEFTQV 199
              E   +T +S SP +      + TP   L DVP  E     S   G     AE T+V
Sbjct: 127 LQKENGHVT-ISESPEE------LGTPGPSLPDVPGIESRGLFSSDSGIEMTPAESTEV 178



>gi|45477003|sp|Q9JIK1|MCDL_RAT   Mucin and cadherin-like protein precursor (Mu-protocadherin)
           (GP100)
          Length = 862

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 1/92 (1%)

Query: 33  TEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFP-APTAGELALEQGPGSPPQP 91
           T +P    P +   S P    GSS+     G      P P A T+ + A   G    P+P
Sbjct: 583 TSQPMVPTPGASTSSQPATPSGSSTQTPRPGTSQPMVPTPGASTSSQPATPSGSTQTPKP 642

Query: 92  SDLSQTHPLPSEPVGSQEDGPRLRAVFDALDG 123
                T   P   VG   DG R   V  A+ G
Sbjct: 643 GTSQPTTTGPISGVGELGDGQRFSTVDMAVLG 674



>gi|26006813|sp|Q9TSZ3|KCH2_CANFA   Potassium voltage-gated channel subfamily H member 2 (Voltage-gated
            potassium channel subunit Kv11.1) (Ether-a-go-go related
            gene potassium channel 1) (ERG1) (c-erg) (DERG)
            (Ether-a-go-go related protein 1) (Eag related protein 1)
          Length = 1158

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 44/175 (25%), Positives = 60/175 (34%), Gaps = 30/175 (17%)

Query: 22   RHRELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELAL 81
            R R+L        +PE+ G  S     P R     S     G     SP   P++ E + 
Sbjct: 884  RKRKLSFRRRTDRDPEQPGEVSA--LGPGRAGAGPSGRGRPGGPWGESPSSGPSSPESSE 941

Query: 82   EQGPGSPPQPSDL---SQTHPLPSEPVGSQ---EDGPRLRAVFDALDGDGDGFVRIEDFI 135
            ++GPG    P  L   S   P P EP G +   EDG +     + L G   G   I  F 
Sbjct: 942  DEGPGRSSSPLRLVPFSSPRP-PGEPPGGEPLTEDGEKSSDTCNPLSGAFSGVSNIFSFW 1000

Query: 136  QFATVYGAEQLDLTEVSSSPGDTPPGGLIATPPGCLIDVPLNEEVPRDSPTRGPR 190
              +  +  ++L                     P C    P    +P  SP R PR
Sbjct: 1001 GDSRGHQYQEL---------------------PRCPAPTPSLLNIPLSSPCRRPR 1034



>gi|12643900|sp|Q9UMN6|MLL4_HUMAN   Myeloid/lymphoid or mixed-lineage leukemia protein 4 (Trithorax
            homolog 2)
          Length = 2715

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 37/131 (28%), Positives = 46/131 (35%), Gaps = 18/131 (13%)

Query: 69   SPFPAPTAGELALEQGPGSPPQP----------SDLSQTHPLPSEPVGSQEDGPRLRAVF 118
            +P P P    L L  GP SPP+           S  S   P P +     EDG       
Sbjct: 2252 APPPPPPPLTLVLSSGPASPPRQAIRVKRVSTFSGRSPPAPPPYKAPRLDEDGEASEDTP 2311

Query: 119  DALDGDGDGFVRIEDFIQFATVYGAEQLDLTEVSSSPGDTPPGGLIATPPGCLIDVPLNE 178
                    GF R+   ++  TV G   LDL       G+  PG L    P     +PL E
Sbjct: 2312 QVPGLGSGGFSRVR--MKTPTVRGV--LDLDRPGEPAGEESPGPLQERSP----LLPLPE 2363

Query: 179  EVPRDSPTRGP 189
            + P   P   P
Sbjct: 2364 DGPPQVPDGPP 2374



>gi|1168696|sp|P43187|ALLB3_BETVE   Calcium-binding allergen Bet v 3 (Bet v III)
          Length = 205

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 72  PAPTAGELALEQGPGSPPQPSDLSQTH-PLPSEPVGSQEDGPRLRAVFDALDGDGDGFVR 130
           P  T        G  S P+   LS +   L SE + +     RLR +FD  D + DG + 
Sbjct: 2   PCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTL----RLRRIFDLFDKNSDGIIT 57

Query: 131 IEDFIQFATVYGAEQLDLTEVSSS 154
           +++  +   + G E  DL+E+ S+
Sbjct: 58  VDELSRALNLLGLE-TDLSELEST 80



>gi|14194426|sp|Q9QYV0|ADA15_RAT   ADAM 15 precursor (A disintegrin and metalloproteinase domain 15)
           (Metalloproteinase-like, disintegrin-like, and
           cysteine-rich protein 15) (MDC-15) (Metalloprotease RGD
           disintegrin protein) (Metargidin) (CRII-7)
          Length = 816

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 15/83 (18%)

Query: 51  RLQGSSSSHRARGEVDVFSPFPAPTAGEL--ALEQGPGSPPQPSDLSQTHPLPSEPVGSQ 108
           +L+GSS  +RA        P P   A ++     QGP  PP P       PLP+ P G  
Sbjct: 729 QLKGSSCQYRAAQSGPPERPGPPQRAQQMPGTKPQGPTKPPPP-----RKPLPANPQG-- 781

Query: 109 EDGPRLRAVFDALDGDGDGFVRI 131
                 R     L G GDG +++
Sbjct: 782 ------RPPLGDLPGPGDGSLQL 798



>gi|119714|sp|P13983|EXTN_TOBAC   Extensin precursor (Cell wall hydroxyproline-rich glycoprotein)
          Length = 620

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 26  LDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGP 85
           L P  + T  P   G    P  AP R      SH   G +      P P  G L   +G 
Sbjct: 49  LSPPSAPTTTPPSRGHVPSPRHAPPRHAYPPPSH---GHLPPSVGGPPPHRGHLPPSRGF 105

Query: 86  GSPPQPSDLSQTHPLPSEPVGSQEDGP 112
             PP P  +S +HP PS        GP
Sbjct: 106 NPPPSPV-ISPSHPPPSYGAPPPSHGP 131



>gi|21431749|sp|P41987|CXA3_BOVIN   Gap junction alpha-3 protein (Connexin 44) (Cx44)
          Length = 407

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 68  FSPFPAPTAGELALEQGPG--SPPQPSDLSQTHPLPSEPVGSQEDGPRLRA 116
           F P+ AP+A  L     PG   PP P+ L  T   P  P G    G R RA
Sbjct: 269 FPPYYAPSASSLGQASAPGYPEPPPPAALPGT---PGTPGGGGNQGLRARA 316



>gi|37999853|sp|Q96JG9|ZN469_HUMAN   Zinc finger protein 469
          Length = 772

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 9/88 (10%)

Query: 31  SWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQ 90
           S T+ P E G      S   + +G SS+ R +G+V    P PA +    +  + P +P +
Sbjct: 607 SCTKGPREAGEQGPHGSLGPKEKGESSTKRKKGQV----PGPARSESVGSFGRAPSAPDK 662

Query: 91  P-----SDLSQTHPLPSEPVGSQEDGPR 113
           P        + +  LP++P  + ++ PR
Sbjct: 663 PPRTPRKQATPSRVLPTKPKPNSQNKPR 690



>gi|22001988|sp|Q9Y566|SHK1_HUMAN   SH3 and multiple ankyrin repeat domains protein 1 (Shank1)
            (Somatostatin receptor interacting protein) (SSTR
            interacting protein) (SSTRIP)
          Length = 2161

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 82   EQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAV---FDALDGDGDGFVRIEDF---I 135
            E GPG PP PS      P P+ P  S+E+G  L  +     ++D +   F+ +E     +
Sbjct: 1513 EDGPGVPP-PSPRRSVPPSPTSPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPL 1571

Query: 136  QFATVYGAEQLDLTEVSSSPGDTPPGGLIATPP 168
            +F+  +   +  LT     P    P      PP
Sbjct: 1572 EFSNSFEKPESPLTPGPPHPLPDTPAPATPLPP 1604



>gi|14285349|sp|Q9HEV5|ASD4_NEUCR   GATA type zinc finger protein Asd4 (Ascus development protein 4)
          Length = 426

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 15/82 (18%)

Query: 34  EEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSD 93
           ++PE+  PA   +  P  +            +D  +P PAP A E A EQ P   P+P  
Sbjct: 309 QQPEQQQPAPAEQPIPTPMA-----------IDEATPAPAP-APEAAPEQAPAPAPEPVQ 356

Query: 94  LSQTHPLP---SEPVGSQEDGP 112
                P P   SEP  +    P
Sbjct: 357 EQAQEPEPAPVSEPTEASAPAP 378



>gi|22001841|sp|Q14761|PTCA_HUMAN   Protein tyrosine phosphatase receptor type C-associated protein
           (PTPRC-associated protein) (CD45-associated protein)
           (CD45-AP) (Lymphocyte phosphatase-associated
           phosphoprotein)
          Length = 206

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 34  EEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAG 77
           E  ++CG AS PE  P R + +  S    G++ + SP PA   G
Sbjct: 129 EGEQQCGEASSPEQVPVRAEEARDSD-TEGDLVLGSPGPASAGG 171



>gi|23822331|sp|Q96KM6|Y1196_HUMAN   Hypothetical zinc finger protein KIAA1196
          Length = 892

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 8/57 (14%)

Query: 35  EPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALE-QGPGSPPQ 90
           E  E GP+S  +S+ F+L   +SS          SP   P+ G  AL+  GP SPP+
Sbjct: 363 ENGEYGPSSMGQSSAFQLSADTSS-------GSLSPGSRPSGGMEALKAAGPASPPE 412



>gi|57015419|sp|Q9ULC8|ZDHC8_HUMAN   Zinc finger DHHC domain-containing protein 8 precursor (Zinc finger
           protein 378)
          Length = 765

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 32/130 (24%), Positives = 46/130 (35%), Gaps = 14/130 (10%)

Query: 16  LRTGTPRHRELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPT 75
           LR G+       P F     P      S   S+  R   +SSS     +    +P P P+
Sbjct: 602 LRYGSRDDLVAGPGFGGARNPALQTSLSSLSSSVSRAPRTSSSSLQADQASSNAPGPRPS 661

Query: 76  AGE------LALEQGPGSPPQPSD--------LSQTHPLPSEPVGSQEDGPRLRAVFDAL 121
           +G         L   PG+P  PS         +    P P   +  Q D P+L+     L
Sbjct: 662 SGSHRSPARQGLPSPPGTPHSPSYAGPKAVAFIHTDLPEPPPSLTVQRDHPQLKTPPSKL 721

Query: 122 DGDGDGFVRI 131
           +G   G  R+
Sbjct: 722 NGQSPGLARL 731



>gi|41017595|sp|O95153|RIP1_HUMAN   Peripheral-type benzodiazepine receptor-associated protein 1 (PRAX-1)
            (Peripheral benzodiazepine receptor interacting protein)
            (PBR-IP) (RIM binding protein 1) (RIM-BP1)
          Length = 1857

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 49/191 (25%), Positives = 67/191 (35%), Gaps = 32/191 (16%)

Query: 14   VPLRTGTPRHRELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPA 73
            V +RT +P     D +      P    PA  P S P R             V   SP P+
Sbjct: 1055 VVVRTMSPHGESADSI------PAPITPALAPASLPAR-------------VSCPSPHPS 1095

Query: 74   PTAGE--LALEQGPGSPPQPSDLSQTHPLP---SEPVGSQEDGPRLRAVFDALDGDGDGF 128
            P A     +   GPG P  P      HP P    EP G+    P  R +      D    
Sbjct: 1096 PEARAPLASASPGPGDPSSPLQ----HPAPLGTQEPPGAPPASPS-REMAKGSHEDPPAP 1150

Query: 129  VRIEDFIQFATVYGAEQLDLTEVSSSPGDTPPGGLIATPPGCLIDVPLNEEVPRDSPTRG 188
               E+    A V G  + + T  +S+ G+  PG    +      +    E  P  S T+G
Sbjct: 1151 CSQEE--AGAAVLGTSE-ERTASTSTLGEKDPGPAAPSLAKQEAEWTAGEACPASSSTQG 1207

Query: 189  PRYCSAEFTQV 199
             R   A  T++
Sbjct: 1208 ARAQQAPNTEM 1218



>gi|141452|sp|P20190|YT55_STRFR   Hypothetical protein in transposon TN4556
          Length = 439

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 143 AEQLDLTEVSSSPGDTPPGGLIATPPGCLIDVPLNEEVPRDSPTRG 188
           A ++ + +V +      PGGL+  PP CL+  P     PRD P  G
Sbjct: 187 AGEVQILDVHAQDLLRAPGGLVEHPPQCLL--PQVHLTPRDQPVNG 230



>gi|5902695|sp|O77715|ADA2B_DIDMA   Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor) (Alpha-2B
           adrenoreceptor)
          Length = 382

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 34  EEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGS 87
           EE EECGP + P S+   LQG+ +   ++G     S   A   G++ L +GP S
Sbjct: 279 EEEEECGPPAPPTSS--SLQGTPNFQPSQG-----SQVLATLRGQVLLARGPAS 325



>gi|46395989|sp|Q9H1U4|EFL5_HUMAN   Multiple EGF-like-domain protein 5 precursor (Multiple epidermal
           growth factor-like domains 9) (UNQ671/PRO1305)
          Length = 600

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 9/97 (9%)

Query: 17  RTGTPRHRELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTA 76
           RTG PR     PL + +       PA  PE+ P       SS   +  +   SP   P A
Sbjct: 77  RTGPPRATVHRPLAATS-------PAQSPETTPLWATAGPSSTTFQAPLGP-SPTTPPAA 128

Query: 77  GELALEQGPGSPPQPSDLSQTH-PLPSEPVGSQEDGP 112
              +      + P P+ LS T  P P+ PV +    P
Sbjct: 129 ERTSTTSQAPTRPAPTTLSTTTGPAPTTPVATTVPAP 165



>gi|130896|sp|P06186|PRGR_RABIT   Progesterone receptor (PR)
          Length = 930

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 41  PASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQTHPL 100
           P S P   P    G ++   + G   V S   + +  E  L +  G+PPQ    +   PL
Sbjct: 423 PPSLPPRVPSSRPGEAAVAASPGSASVSSSSSSGSTLECILYKAEGAPPQQGPFA---PL 479

Query: 101 PSEPVGS 107
           P +P G+
Sbjct: 480 PCKPPGA 486



>gi|117761|sp|P13627|CY1_PARDE   Cytochrome c1 precursor
          Length = 450

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 3/99 (3%)

Query: 15  PLRTGTPRHRELDPLFSWTEEPE-ECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPA 73
           P  T TP         + TEEP+ E  PA+  E A    + + +   A  E     P   
Sbjct: 79  PAATETPAEEPAADEPAATEEPDAEAEPAA--EEAQATTEEAPAEEPAAEEPAAEEPAEE 136

Query: 74  PTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQEDGP 112
           P A   A E      P   + +   P   EP  ++E+ P
Sbjct: 137 PAADAPAEEAAAEEAPAEPEAAAEEPAAEEPEATEEEAP 175



>gi|2493782|sp|Q28084|CA34_BOVIN   Collagen alpha 3(IV) chain
          Length = 471

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 6/45 (13%)

Query: 69  SPFPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQ-EDGP 112
           SP P  +AGE  ++  PG P  P D     P P  P G   EDGP
Sbjct: 159 SPGPPGSAGEPGMQGEPGPPGPPGD-----PGPCGPKGKPGEDGP 198



>gi|55976503|sp|Q84L31|R233_ARATH   Putative DNA repair protein RAD23-3 (RAD23-like protein 3)
           (AtRAD23-3)
          Length = 419

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 33  TEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSP---P 89
           T + +   P++   S   +   S S+  A        P P PT   +A  +   +P   P
Sbjct: 91  TSQAKSIPPSTSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEP 150

Query: 90  QPSDLSQTHPLP-SEPVGSQED 110
            P+ +S + P P S PVGSQ D
Sbjct: 151 VPATISSSTPAPDSAPVGSQGD 172



>gi|18203330|sp|Q9NZM4|GSR1_HUMAN   Glioma tumor suppressor candidate region gene 1 protein
          Length = 1509

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 8/72 (11%)

Query: 41  PASCPESAPF----RLQGSSSSHRARGEVDVFSPFPAPTAGELALE----QGPGSPPQPS 92
           P S P   P      L  SS+S       +  S  PAPT  +  L+    QGP   P P 
Sbjct: 813 PQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPP 872

Query: 93  DLSQTHPLPSEP 104
                 P P+ P
Sbjct: 873 PTLHLVPEPAAP 884



>gi|24638225|sp|Q9W7R6|SOX14_CHICK   Transcription factor SOX-14
          Length = 240

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 31  SWTEEPEECGPASCPESAPFRL----QGSSSSHRARGEVD-VFSPFPAPTAGELALEQGP 85
           S    PE+      P SAP+ L    Q SSS+ +   EV    +    P A  L  + G 
Sbjct: 117 SLLSSPEKARAFLPPTSAPYSLLDPSQFSSSAIQKMTEVPHTLATGTLPYASTLGYQNGA 176

Query: 86  -GSPPQPSDLSQTHPLPSEP 104
            GS   PS  + THP P+ P
Sbjct: 177 FGSLSCPSQHTHTHPSPTNP 196



>gi|29336893|sp|Q96DN6|MBD6_HUMAN   Methyl-CpG-binding domain protein 6 (Methyl-CpG binding protein
           MBD6)
          Length = 1003

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 18/136 (13%)

Query: 81  LEQGPGSPPQPSDLSQTHP-LPSEPVGSQEDGPRLRAVFDALDGDGDGFVRIEDFIQFAT 139
           L+   G+PPQP  LS   P  P+  V +    P   ++  A    G    R    +  + 
Sbjct: 685 LDPPSGTPPQPCVLSAPQPGPPTSSVTTATTDPGASSLGKAPSNSG----RPPQLL--SP 738

Query: 140 VYGAEQL-DLTEVSSSPGDTPPGGLIATPPGCLIDVPLNEEV-------PRDSPTRGPRY 191
           + GA  L DL+ ++SSPG  P    +  PPG L+   L  ++       P  S    P  
Sbjct: 739 LLGASLLGDLSSLTSSPGALPS---LLQPPGPLLSGQLGLQLLPGGGAPPPLSEASSPLA 795

Query: 192 CSAEFTQVLAAEARLP 207
           C  +  Q+   +   P
Sbjct: 796 CLLQSLQIPPEQPEAP 811



>gi|41017813|sp|Q9X6Y1|RPOB_AQUPY   DNA-directed RNA polymerase beta chain (RNAP beta subunit)
           (Transcriptase beta chain) (RNA polymerase beta subunit)
          Length = 1469

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 5/68 (7%)

Query: 131 IEDFIQFATVYGAEQLDLTEVSSSPGDTPPGGLIATPPG-CLIDVPLNEEVPRDSPTRGP 189
           IE++ +   +   E++++  V+S P +     +I +P G  L+D    +  PRD+  R P
Sbjct: 315 IEEWEELVRILDDERIEVLSVTSVPREN----VIKSPYGKSLVDTLATDTSPRDADRRSP 370

Query: 190 RYCSAEFT 197
               AE+T
Sbjct: 371 VKVPAEYT 378



>gi|59800452|sp|O36027|WSP1_SCHPO   Wiskott-Aldrich syndrome homolog protein 1
          Length = 574

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 39/152 (25%), Positives = 57/152 (37%), Gaps = 29/152 (19%)

Query: 17  RTGTPRHRELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPA--P 74
           RT TP      P+ +    P    P+  P + P    G+ ++        +  P PA  P
Sbjct: 411 RTSTP------PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464

Query: 75  TAGELALEQGPGSPPQPSDLSQTHPLPSEPVGS-----QEDG-PRLRAVFDALDGDGDGF 128
            A  L     P  PP P+      P P+ PV S     Q+DG   L A   A  G     
Sbjct: 465 AAPPLP-PAAPAPPPAPA------PAPAAPVASIAELPQQDGRANLMASIRASGG----- 512

Query: 129 VRIEDFIQFATVYGAEQLDLTEVSSSPGDTPP 160
               D ++   V  +  +  T+ S+ P + PP
Sbjct: 513 ---MDLLKSRKVSASPSVASTKTSNPPVEAPP 541



>gi|8247928|sp|Q61572|FOXC1_MOUSE   Forkhead box protein C1 (Forkhead-related protein FKHL7)
           (Forkhead-related transcription factor 3) (FREAC-3)
           (Transcription factor FKH-1) (Mesoderm/mesenchyme
           forkhead 1) (MF-1)
          Length = 553

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 33/126 (26%), Positives = 42/126 (33%), Gaps = 30/126 (23%)

Query: 72  PAPTAGELALEQGPGSPPQPSDLSQ------THPLPSEPVGSQEDGPRLRAVFDALDGDG 125
           PAP   E A    PG  P P  +        T P P +P+              A  G G
Sbjct: 203 PAPAPPEQAEGSAPGPQPPPVRIQDIKTENGTCPSPPQPLSPA-----------AALGSG 251

Query: 126 DGFVRIEDFIQFATVYGAEQLDLTEVSSSPGDTPPGGLIATPPGCLIDVPLNEEVPRDSP 185
                       ATV   E  D +  S S G +PPG L +  P   + +   E  P   P
Sbjct: 252 SA----------ATVPKIESPDSSSSSLSSGSSPPGSLPSARP---LSLDAAEPAPPPQP 298

Query: 186 TRGPRY 191
              P +
Sbjct: 299 APPPHH 304



>gi|32363203|sp|Q9ULH7|MRTFB_HUMAN   Myocardin-related transcription factor B (MRTF-B)
          Length = 1088

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 1   MPAAGLWSFLRSRVPLRTGT-PRH-----RELDPLF-----SWTEEPEECGPASCPESAP 49
           +P A L S L   VP    T P+H     +++  +F     S T  P +  PA   +  P
Sbjct: 757 IPTAALASGLAPTVPQTQDTFPQHVLSQPQQVRKVFTNSASSNTVLPYQRHPAPAVQQ-P 815

Query: 50  FRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQE 109
           F  + S+S  ++R      +P P+   G     + P SPP P      H L   PV   +
Sbjct: 816 FINKASNSVLQSRN-----APLPSLQNGPNTPNK-PSSPPPPQQFVVQHSLFGSPVAKTK 869

Query: 110 DGPR 113
           D PR
Sbjct: 870 DPPR 873



>gi|45644997|sp|P39060|CA1H_HUMAN   Collagen alpha 1(XVIII) chain precursor [Contains: Endostatin]
          Length = 1516

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 14/62 (22%)

Query: 69  SPFPAPTAGE--LALEQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGD 126
           +P PA   GE  LA   GP  PP P       P P  P      GP L A FD ++G G 
Sbjct: 752 APGPAGARGESGLAGAPGPAGPPGP-------PGPPGP-----PGPGLPAGFDDMEGSGG 799

Query: 127 GF 128
            F
Sbjct: 800 PF 801



>gi|131104|sp|P02630|PRVA_RAJCL   Parvalbumin alpha
          Length = 109

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 107 SQEDGPRLRAVFDALDGDGDGFVRIEDFIQFATVY--GAEQLDLTEVSS 153
           S++    L  +F+ LDGD  G++ +E+   F   +  GA  L+  E S+
Sbjct: 36  SKKSDAELAEIFNVLDGDQSGYIEVEELKNFLKCFSDGARVLNDKETSN 84



>gi|17366642|sp|Q99704|DOK1_HUMAN   Docking protein 1 (p62(dok)) (Downstream of tyrosine kinase 1)
           (pp62)
          Length = 481

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 12/110 (10%)

Query: 77  GELALEQGPGSPPQPSDLSQTHP-LPSEPVGSQEDGP---RLRAVFDALDGD----GDGF 128
           GE+A  + P SPP P +L  + P L +EP+ S    P   +     D LD      G+G 
Sbjct: 272 GEVAEGKLP-SPPGPQELLDSPPALYAEPLDSLRIAPCPSQDSLYSDPLDSTSAQAGEGV 330

Query: 129 VRIEDFIQFATVYGAEQL---DLTEVSSSPGDTPPGGLIATPPGCLIDVP 175
            R +        +  +QL    LT+    P    P GL   PP  L D+P
Sbjct: 331 QRKKPLYWDLYEHAQQQLLKAKLTDPKEDPIYDEPEGLAPVPPQGLYDLP 380



>gi|28202247|sp|P98174|FGD1_HUMAN   Putative Rho/Rac guanine nucleotide exchange factor (Rho/Rac GEF)
           (Faciogenital dysplasia protein) (Zinc finger FYVE
           domain containing protein 3)
          Length = 961

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 27/102 (26%), Positives = 37/102 (36%), Gaps = 3/102 (2%)

Query: 26  LDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGP 85
           L+P+      P    P      AP R + S SS      ++ F   P   A +  +    
Sbjct: 177 LEPIPPPPSRPLPADPRVAKGLAP-RAEASPSSAAVSSLIEKFEREPVIVASDRPVPGPS 235

Query: 86  GSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDG 127
             PP+P  L Q  P    PV    +G   R +F    G  DG
Sbjct: 236 PGPPEPVMLPQ--PTSQPPVPQLPEGEASRCLFLLAPGPRDG 275



>gi|45593475|sp|Q12851|M4K2_HUMAN   Mitogen-activated protein kinase kinase kinase kinase 2 (MAPK/ERK
           kinase kinase kinase 2) (MEK kinase kinase 2) (MEKKK 2)
           (Germinal center kinase) (GC kinase) (Rab8 interacting
           protein) (B lymphocyte serine/threonine-protein kinase)
          Length = 819

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 8/94 (8%)

Query: 16  LRTGTPRHRELDPL-----FSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSP 70
           ++ G PR +E DPL       WT   +E    S  +S    L+  S + R+  E   F  
Sbjct: 334 VKFGAPRRKETDPLNEPWEEEWTLLGKEELSGSLLQSVQEALEERSLTIRSASE---FQE 390

Query: 71  FPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEP 104
             +P      +++ P   P P+D     PL S P
Sbjct: 391 LDSPDDTMGTIKRAPFLGPLPTDPPAEEPLSSPP 424



>gi|2499636|sp|Q24324|DSOR1_DROME   Dual specificity mitogen-activated protein kinase kinase dSOR1
           (Downstream of RAF) (MAPKK)
          Length = 393

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)

Query: 48  APFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGS 107
           +P RLQG+  S ++    D++S     +  E+A+   P  PP  + L       +E  G 
Sbjct: 247 SPERLQGTHYSVQS----DIWSL--GLSLVEMAIGMYPIPPPNTATLESIFADNAEESGQ 300

Query: 108 QEDGPRLRAVFDALD 122
             D PR  A+F+ LD
Sbjct: 301 PTDEPRAMAIFELLD 315



>gi|7387896|sp|Q48919|APA_MYCAV   Alanine and proline-rich secreted protein apa precursor (45/47 kDa
           antigen) (Fibronectin attachment protein) (FAP-A)
          Length = 381

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 13/95 (13%)

Query: 14  VPLRTGT---PRHRELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSP 70
           VP  T T   PR R +        +P +   A  P  AP    G     R R  +   +P
Sbjct: 47  VPPSTATTPHPRRRRIPG------QPADNAQAGAPAPAP---NGQQRPPRRRRMIPTRAP 97

Query: 71  FPAPTAGELALEQGP-GSPPQPSDLSQTHPLPSEP 104
            PA      A    P G+PP P D +   P P++P
Sbjct: 98  PPAGAPPNGAPPAAPNGAPPPPVDPNAPPPPPADP 132



>gi|55735519|sp|Q6UWL6|KIR2_HUMAN   Kin of IRRE-like protein 2 precursor (Kin of irregular chiasm-like
           protein 2) (Nephrin-like protein 3) (UNQ5827/PRO19646)
          Length = 708

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 89  PQPSDLSQTHPLPSEPVGSQED-GPRLRAVFDALDGDGDGFVRIEDFIQFATVYGAEQLD 147
           P  SD S +     E  GS+ED GP +      L  + +G +  +D        G  ++ 
Sbjct: 553 PGSSDGSSSRGPEEEETGSREDRGPIVHTDHSDLVLEEEGTLETKD-----PTNGYYKVR 607

Query: 148 LTEVSSSPGDTPPGGLIATPPGCL 171
              VS S G+ P GGL   PP  L
Sbjct: 608 GVSVSLSLGEAPGGGLFLPPPSPL 631



>gi|29337157|sp|Q9Z1J1|TF7L1_MOUSE   Transcription factor 7-like 1 (HMG-box transcription factor 3)
           (TCF-3) (mTCF-3)
          Length = 584

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 66  DVFSPFPAPT--AGELALEQGPGSPPQPSDLSQTHPLPSEPVG 106
           D FSP   PT  + E+  + G   PP PS+LS  +PL    VG
Sbjct: 197 DHFSPASPPTHLSPEIDPKTGIPRPPHPSELSPYYPLSPGAVG 239



>gi|47116569|sp|Q96P26|5NIB_HUMAN   Cytosolic 5'-nucleotidase IB (cN1B) (cN-IB) (Autoimmune
           infertility-related protein) (FKSG85 protein)
          Length = 610

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 33  TEEPEECGPASCPESAPFRLQGSSSSHRARG-EVDVFSPFPAPTAGELALEQGPGSPPQP 91
           T+ P    P S   SA  +L  SS+S R       +    P P +G+ +L Q P SP  P
Sbjct: 130 TKAPSIDEPRSRNTSA--KLPSSSTSSRTPSTSPSLHDSSPPPLSGQPSL-QPPASPQLP 186

Query: 92  SDLSQTHPLPSEP 104
             L    P P EP
Sbjct: 187 RSLDSRPPTPPEP 199



>gi|462387|sp|P33479|IE18_PRVKA   Immediate-early protein IE180
          Length = 1446

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 5/67 (7%)

Query: 40   GPASCPESAPFRLQGSSSSH---RARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQ 96
            GPA  P+ AP  L  SSSS    R R  +      PAP  G   +  G    P+PS+ + 
Sbjct: 936  GPA--PDPAPALLSSSSSSSEDDRLRRPLGPMPEHPAPDGGFRRVPAGETHTPRPSEAAL 993

Query: 97   THPLPSE 103
                P E
Sbjct: 994  AAYCPPE 1000



>gi|41688799|sp|Q9Y3S1|WNK2_HUMAN   Serine/threonine-protein kinase WNK2 (Protein kinase with no lysine
           2) (Protein kinase, lysine-deficient 2) (P/OKcl.13)
          Length = 2297

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 14/55 (25%)

Query: 58  SHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQEDGP 112
           + RARG        PAP A    L   PG+P  P+D         EPVG+QE GP
Sbjct: 86  AERARGRPAA----PAPAA----LVAQPGAPGAPADAGP------EPVGTQEPGP 126



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 38   ECGPASCPESAPFRLQGSSSSHRAR---GEVDVFSPFPAPTAGELALEQGPGSPP-QPSD 93
            + GP++ P + P  L  SS    A    G     S  P P +G  +   GPG+P    S+
Sbjct: 1407 QAGPSNPPGAPPAPLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQGLTSE 1466

Query: 94   LSQTHPL 100
            L  + PL
Sbjct: 1467 LETSQPL 1473



>gi|41688772|sp|Q80UE6|WNK4_MOUSE   Serine/threonine-protein kinase WNK4 (Protein kinase with no lysine
           4) (Protein kinase, lysine-deficient 4)
          Length = 1222

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 28/139 (20%)

Query: 52  LQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQEDG 111
           +Q      R   E++V  P   P    ++L  GP S   P         P EP   Q   
Sbjct: 514 IQRKREKLRKARELEVLPPDSGPPPATVSLAPGPPSAFPPE--------PEEPEADQHQS 565

Query: 112 PRLR-AVFDALDGD--GDGFVRIEDFIQFATVYGAEQLDLTEVSSSPGDTPPGGLIATPP 168
              R A + +   D   DG++    F+                +S P   PPGGL ++P 
Sbjct: 566 FLFRHASYSSTTSDCETDGYLSSSGFLD---------------ASDPALQPPGGLPSSPA 610

Query: 169 GCLIDVP--LNEEVPRDSP 185
              + +P      +PR  P
Sbjct: 611 ESHLCLPSGFALSIPRSGP 629



>gi|29429203|sp|P54259|DRPLA_HUMAN   Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)
          Length = 1185

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 35/103 (33%), Positives = 39/103 (37%), Gaps = 17/103 (16%)

Query: 18  TGTPRHRELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAG 77
           T  P    L P  S    P    P S   S+      SSSS  +       SPFPA  A 
Sbjct: 351 TLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSA-----SPFPASQA- 404

Query: 78  ELALEQGPGSPPQPSDLS-------QTHP-LPSEPVGSQEDGP 112
              L   P S P P+ LS        T P LPS+ V SQ   P
Sbjct: 405 ---LPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPP 444



>gi|6165988|sp|Q15878|CAC1E_HUMAN   Voltage-dependent R-type calcium channel alpha-1E subunit
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2312

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 1/87 (1%)

Query: 22   RHRELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELAL 81
            R +   P    ++ P   G  S  ES+   +  +S+  R+R ++    P P P     +L
Sbjct: 2115 RRQSRSPSEGRSQTPNRQGTGSLSESSIPSVSDTSTPRRSRRQLPPVPPKPRPLLSYSSL 2174

Query: 82   EQGPGSPPQPSDLSQT-HPLPSEPVGS 107
             +  GS   P+D S+   PL S+ + S
Sbjct: 2175 IRHAGSISPPADGSEEGSPLTSQALES 2201



>gi|38372873|sp|O88839|ADA15_MOUSE   ADAM 15 precursor (A disintegrin and metalloproteinase domain 15)
           (Metalloproteinase-like, disintegrin-like, and
           cysteine-rich protein 15) (MDC-15) (Metalloprotease RGD
           disintegrin protein) (Metargidin) (AD56)
          Length = 864

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 13/58 (22%)

Query: 70  PFPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDG 127
           P PA         QGP  PP P       PLP+ P G    G         L G GDG
Sbjct: 798 PLPADPVVRRPKSQGPTKPPPP-----RKPLPANPQGQHPPGD--------LPGPGDG 842



>gi|22096343|sp|P34804|COL40_CAEEL   Cuticle collagen 40
          Length = 306

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 6/81 (7%)

Query: 36  PEECGPASCPESA----PFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQP 91
           P   GPA  P  A    P    G++ S    GE     P P   AG    +  PG+P  P
Sbjct: 165 PGPAGPAGGPGPAGPPGPAGADGNTPS--GGGEGPAGPPGPPGPAGNPGTDGAPGNPGAP 222

Query: 92  SDLSQTHPLPSEPVGSQEDGP 112
             +++T   P     +   GP
Sbjct: 223 GQVTETPGTPGPAGAAGPPGP 243



>gi|55976772|sp|Q9NWS9|ZN446_HUMAN   Zinc finger protein 446
          Length = 450

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 17/67 (25%)

Query: 37  EECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQ 96
           E  GP  CPE+ P +  G ++     G     +  PAPT         PG+PP P     
Sbjct: 270 ESEGPPGCPEAQPPQGPGPAAWEGLSG-----AATPAPTV-------RPGTPPVP----- 312

Query: 97  THPLPSE 103
           T P P+E
Sbjct: 313 TQPTPAE 319



>gi|1729810|sp|P49848|TAF6_HUMAN   Transcription initiation factor TFIID subunit 6 (Transcription
           initiation factor TFIID 70 kDa subunit) (TAF(II)70)
           (TAFII-70) (TAFII-80) (TAFII80)
          Length = 677

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 16/46 (34%), Positives = 19/46 (41%)

Query: 82  EQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDG 127
           E  P +P +      T PL S   G +EDGP       A   DG G
Sbjct: 147 ENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKG 192



>gi|124336|sp|P16382|IL4R_MOUSE   Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)
           [Contains: Soluble interleukin-4 receptor alpha chain
           (IL-4-binding protein) (IL4-BP)]
          Length = 810

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 7/44 (15%)

Query: 72  PAPTAGELALEQGPG------SPPQPSDLSQTHPLPSEPVGSQE 109
           PAP  GELA EQ          PP P+D   + P P +PV S E
Sbjct: 509 PAPNPGELAPEQQQADHLEEEEPPSPADPHSSGP-PMQPVESWE 551



>gi|584708|sp|P38479|ABP1_SACEX   ACTIN BINDING PROTEIN
          Length = 617

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 35/130 (26%), Positives = 50/130 (38%), Gaps = 21/130 (16%)

Query: 8   SFLRSRVP-LRTGTPRHRELDPLFSWTEEPEECGPASCP-------ESAPFR-------- 51
           S +  R+P + T TP H E D    W E+ +E    + P       ESAP +        
Sbjct: 422 SNIGQRLPGMHTETPEHEEEDNDDDWGEDEDEPPKRNIPPPVMPARESAPQQPLPPRNTE 481

Query: 52  ---LQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPV-GS 107
              ++          E +  +P P+  +   A E  P   PQ  +  +  P PS P  GS
Sbjct: 482 PEPVEEGEEEEEEEEEEEEEAPAPSLPSRNAAPEPEP-EQPQEEEEEEEAPAPSLPSRGS 540

Query: 108 QEDGPRLRAV 117
               P  RAV
Sbjct: 541 VPPPPPQRAV 550



>gi|115523|sp|P05933|CALM_SCHPO   Calmodulin (CaM)
          Length = 150

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 5/96 (5%)

Query: 73  APTAGELA--LEQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDGFVR 130
           +PTA EL   + +         D ++   + +  +   ++   +R  F   D DG+G++ 
Sbjct: 44  SPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYIT 103

Query: 131 IEDFIQFATVYGAEQLDLTEVSS--SPGDTPPGGLI 164
           +E+     T  G E+L   EV+      DT   G+I
Sbjct: 104 VEELTHVLTSLG-ERLSQEEVADMIREADTDGDGVI 138



>gi|39931686|sp|O74502|MSH6_SCHPO   DNA mismatch repair protein msh6
          Length = 1254

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 47  SAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQTHP-LPSEPV 105
           S+P R   +S SH A  E+D  S    P + +      P S P  S L ++ P  P + +
Sbjct: 71  SSPERELPTSPSHHANTEIDSSSSMLPPPSSD------PFSSPLSSSLHRSSPKRPHDSL 124

Query: 106 GSQEDGPRLR 115
           G +  G  LR
Sbjct: 125 GEESPGKLLR 134



>gi|56749106|sp|Q63755|PRDM2_RAT   PR-domain zinc finger protein 2 (Retinoblastoma protein-interacting
            zinc-finger protein) (Zinc finger protein RIZ)
          Length = 1706

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 34/141 (24%), Positives = 48/141 (34%), Gaps = 26/141 (18%)

Query: 12   SRVPLRTGTPRHRELDPLFSWTE--EPEECGPA----------------SCPES--APFR 51
            S  PL+T +    +L PL + TE   P  C P                 S P S  +P +
Sbjct: 939  SSPPLQTASLSSGQLPPLLTPTEPSSPPPCPPVLTVATPPPPLLPTVPLSHPSSDASPQQ 998

Query: 52   LQGSSSSHRARGEVDVFSPF------PAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPV 105
                 S+  A+  + + SP       P P    L     PG P   S  S +   PS   
Sbjct: 999  CPSPFSNTTAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSFPSSSC 1058

Query: 106  GSQEDGPRLRAVFDALDGDGD 126
             S    P   +   ++   GD
Sbjct: 1059 SSTSPSPPPLSAVSSVVSSGD 1079



>gi|29337134|sp|Q9HCS4|TF7L1_HUMAN   Transcription factor 7-like 1 (HMG-box transcription factor 3)
           (TCF-3)
          Length = 588

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 66  DVFSPFPAPT--AGELALEQGPGSPPQPSDLSQTHPLPSEPVG 106
           D FSP   PT  + E+  + G   PP PS+LS  +PL    VG
Sbjct: 200 DHFSPGSPPTHLSPEIDPKTGIPRPPHPSELSPYYPLSPGAVG 242



>gi|12643930|sp|Q9WU42|NCOR2_MOUSE   Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator of
            retinoic acid and thyroid hormone receptor) (SMRT)
            (SMRTe) (Thyroid-, retinoic-acid-receptor-associated
            corepressor) (T3 receptor-associating factor) (TRAC)
          Length = 2472

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 52   LQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQTH-PLPSEPVG 106
            ++GS +    R  V+    +    A  L  E  P  PP P DL++T+ P P +P+G
Sbjct: 1318 IRGSITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPPRDLTETYKPRPLDPLG 1373



>gi|12644294|sp|P49869|HR38_DROME   Probable nuclear hormone receptor HR38 (dHR38)
          Length = 1073

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 17/81 (20%)

Query: 40  GPASCPESAP-----FRLQGSSSSHRARGEVDVFSPF-PAPTAGELALEQGP-------- 85
           GP SC  S P     + L+ +SSS  +  +    S   P PT   L L+           
Sbjct: 474 GPLSCGSSLPSFQETYSLKYNSSSGSSPQQASSSSTAAPTPTDQVLTLKMDEDCFPPLSG 533

Query: 86  ---GSPPQPSDLSQTHPLPSE 103
               SPP PS L Q H L S+
Sbjct: 534 GWSASPPAPSQLQQLHTLQSQ 554



>gi|1706790|sp|P52734|FGD1_MOUSE   Putative Rho/Rac guanine nucleotide exchange factor (Rho/Rac GEF)
           (Faciogenital dysplasia protein homolog)
          Length = 960

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 51  RLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQ-E 109
           R + S+SS      ++ F   P   A +         PP+P+ L Q    P +P GSQ  
Sbjct: 201 RAEASTSSAAVSSLIEKFEREPVIVASDRPAPGPCPVPPEPAMLPQP---PPQPTGSQLP 257

Query: 110 DGPRLRAVFDALDGDGDG 127
           +G   R +F    G  DG
Sbjct: 258 EGEASRCLFLLAPGPRDG 275



>gi|57013028|sp|O00204|ST2B1_HUMAN   Sulfotransferase family cytosolic 2B member 1 (Sulfotransferase
           2B1) (Alcohol sulfotransferase) (Hydroxysteroid
           sulfotransferase 2)
          Length = 365

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 26/81 (32%)

Query: 28  PLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTA---GELALEQG 84
           P F W E+PEE G    PE +P                    P P P+      L  E  
Sbjct: 305 PTFPWDEDPEEDGSPD-PEPSP-------------------EPEPKPSLEPNTSLEREPR 344

Query: 85  PGSPPQPS--DLSQT-HPLPS 102
           P S P PS    S+T HP PS
Sbjct: 345 PNSSPSPSPGQASETPHPRPS 365



>gi|13124808|sp|P18431|SGG_DROME   Protein kinase shaggy (Protein zeste-white 3)
          Length = 1067

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 21  PRHRELDPLFSWTEEPEECGPASCPESAPFRLQGSS 56
           P  R++ PLF++TE      P+  P+  P  LQ +S
Sbjct: 903 PNGRDMPPLFNFTEHELSIQPSLVPQLLPKHLQNAS 938



>gi|12644391|sp|Q08050|FOXM1_HUMAN   Forkhead box protein M1 (Forkhead-related protein FKHL16)
           (Hepatocyte nuclear factor 3 forkhead homolog 11)
           (HNF-3/fork-head homolog-11) (HFH-11) (Winged helix
           factor from INS-1 cells) (M-phase phosphoprotein 2)
           (MPM-2 reactive phosphoprotein 2) (Transcription factor
           Trident)
          Length = 763

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 36/155 (23%), Positives = 50/155 (32%), Gaps = 19/155 (12%)

Query: 34  EEPEEC---GPASCPESA--PFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSP 88
           +EPE     GP++   +A  PF    S  + +     +V  PF  P    L +   P   
Sbjct: 556 DEPELLFSEGPSTSRWAAELPFPADSSDPASQLSYSQEVGGPFKTPIKETLPISSTPSKS 615

Query: 89  PQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDGFVRIEDFIQFATVYGAEQLDL 148
             P         P   VG  +  P          G  D               G   L  
Sbjct: 616 VLPRTPESWRLTPPAKVGGLDFSP-----VQTSQGASD---------PLPDPLGLMDLST 661

Query: 149 TEVSSSPGDTPPGGLIATPPGCLIDVPLNEEVPRD 183
           T + S+P    P  L+++ P  LI VP     P D
Sbjct: 662 TPLQSAPPLESPQRLLSSEPLDLISVPFGNSSPSD 696



>gi|127109|sp|P03971|MIS_HUMAN   Muellerian inhibiting factor precursor (MIS) (Anti-Muellerian
           hormone) (AMH) (Mullerian inhibiting substance)
          Length = 560

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 17/106 (16%)

Query: 72  PAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPV--------------GSQEDGPRLRAV 117
           PAP      L+  P  PP+PS   +  P  ++P                ++   PRL   
Sbjct: 257 PAPLPAHGQLDTVPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARASAPRLALD 316

Query: 118 FDALDGDGDGFVRIEDFIQFATVYGAEQ---LDLTEVSSSPGDTPP 160
            DAL G   G V + D      +   E+   L L   +++ GD  P
Sbjct: 317 PDALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDPAP 362



>gi|3024673|sp|Q63801|TAF6_RAT   Transcription initiation factor TFIID subunit 6 (Transcription
           initiation factor TFIID 70 kDa subunit) (TAF(II)70)
           (TAFII-70) (TAFII-80) (TAFII80) (p80)
          Length = 678

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 16/46 (34%), Positives = 19/46 (41%)

Query: 82  EQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDG 127
           E  P +P +      T PL S   G +EDGP       A   DG G
Sbjct: 147 ENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGKG 192



>gi|3024691|sp|Q62311|TAF6_MOUSE   Transcription initiation factor TFIID subunit 6 (Transcription
           initiation factor TFIID 70 kDa subunit) (TAF(II)70)
           (TAFII-70) (TAFII-80) (TAFII80) (p80)
          Length = 678

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 16/46 (34%), Positives = 19/46 (41%)

Query: 82  EQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDG 127
           E  P +P +      T PL S   G +EDGP       A   DG G
Sbjct: 147 ENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGKG 192



>gi|1345923|sp|P32927|CYRB_HUMAN   Cytokine receptor common beta chain precursor (CDw131 antigen)
           (GM-CSF/IL-3/IL-5 receptor common beta-chain)
          Length = 897

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 43/165 (26%), Positives = 57/165 (34%), Gaps = 19/165 (11%)

Query: 19  GTPRHRELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGE 78
           G P  R L  +    E P+E G    P               A G+V +     A   G+
Sbjct: 595 GPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEY----LCLPAGGQVQLVPLAQAMGPGQ 650

Query: 79  -LALEQGP-----GSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAV----FDALD-GDGDG 127
            + +E+ P     GSP   S      P     VG Q+      A+     D  D G   G
Sbjct: 651 AVEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASG 710

Query: 128 FVRIEDFIQFATVYGAEQLDLTEVSSSPGDTPPG---GLIATPPG 169
           +V   D + F    GA  + L      P D  P    GL + PPG
Sbjct: 711 YVSSADLV-FTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPG 754



>gi|34395521|sp|Q61210|ARH1_MOUSE   Rho guanine nucleotide exchange factor 1 (Lymphoid blast crisis
           like 2) (Lbc's second cousin)
          Length = 920

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 35/132 (26%), Positives = 50/132 (37%), Gaps = 23/132 (17%)

Query: 64  EVDVFSPFPAPTAGELAL---EQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDA 120
           E D   P PA   G L +   ++  G+P Q +     HPL ++ V S+E  P +    + 
Sbjct: 288 EADAEKPGPADRKGGLGMSSRDRTVGTPGQDNPGVSLHPLSTDSVDSRE--PGVDTPQEP 345

Query: 121 LDGDGDGFVRIEDFIQFATVYGAEQLDLTEVSSSPGD--------------TPPGGLIAT 166
            D    G   +E     A     E    TE S  PGD               PPG     
Sbjct: 346 GDTPPQGPTSLE---PLAPPESTEDNGETE-SPEPGDDGEPGRSGLELEPEEPPGWRELV 401

Query: 167 PPGCLIDVPLNE 178
           PP  L+ +P ++
Sbjct: 402 PPDTLLSLPKSQ 413



>gi|29840772|sp|Q9JKA8|HCN3_RAT   Potassium/sodium hyperpolarization-activated cyclic
           nucleotide-gated channel 3
          Length = 780

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 159 PPGGLIATPPGCLIDVPLNEEVPRDSPTRGPR 190
           PP GL+A PPG +   P    VP     RGP+
Sbjct: 746 PPSGLLAKPPGTV--QPSRSSVPEPVTPRGPQ 775



>gi|24211543|sp|Q9UJ99|CADM_HUMAN   Cadherin-22 precursor
          Length = 828

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 1/71 (1%)

Query: 84  GPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDGDGFVRIEDFIQFATVYGA 143
           G GSPPQ    S+ H LP  P   + D    R          DG + +  +  F T Y  
Sbjct: 717 GAGSPPQAHLPSERHSLPQGPPSPEPDFSVFRDFISRKVALADGDLSVPPYDAFQT-YAF 775

Query: 144 EQLDLTEVSSS 154
           E  D    S S
Sbjct: 776 EGADSPAASLS 786



>gi|17368963|sp|Q9H9D4|ZN408_HUMAN   Zinc finger protein 408 (PR-domain zinc finger protein 17)
          Length = 720

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 5/68 (7%)

Query: 147 DLTEVSSSPGDTPPGGLIA---TPPGCLIDVPLNEEVPRDSPTRGPRYCSAEFTQVLAAE 203
           D  E    PG   P G+ A     PG  +  P  + + +DS   GP     +  +   A+
Sbjct: 211 DAAEPCIDPGSQSPSGIQAENMVSPG--LKFPTQDRISKDSQPLGPLLQDGDVDEECPAQ 268

Query: 204 ARLPRRLE 211
           A++P  L+
Sbjct: 269 AQMPPELQ 276



>gi|2494484|sp|Q12778|FOXO1_HUMAN   Forkhead box protein O1A (Forkhead in rhabdomyosarcoma)
          Length = 655

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 71  FPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPR 113
           F  P AG   L   P  PP P  +SQ  P+P    G     PR
Sbjct: 110 FQGPEAG--CLHPAPPQPPPPGPVSQHPPVPPAAAGPLAGQPR 150



>gi|14423843|sp|O64943|POLC2_JUNOX   Polcalcin Jun o 2 (Calcium-binding pollen allergen Jun o 2)
          Length = 165

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 10/31 (32%), Positives = 20/31 (64%)

Query: 105 VGSQEDGPRLRAVFDALDGDGDGFVRIEDFI 135
           +GS      ++A+ +  D DGDG+V +++F+
Sbjct: 54  LGSDVGEAEVKAMMEEADADGDGYVSLQEFV 84



>gi|3023274|sp|Q26768|AGI6_TRYBB   I/6 AUTOANTIGEN
          Length = 243

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 5/43 (11%)

Query: 105 VGSQEDG---PRLRAVFDALDGDGDGFVRIEDFIQFATVYGAE 144
           VGS +D      + A+F+ALD D  G+V +++F+    +YG E
Sbjct: 103 VGSTQDTLSVEEVDALFNALDSDNRGYVSVDEFMD--ALYGEE 143



>gi|9910676|sp|O08696|FOXM1_MOUSE   Forkhead box protein M1 (Forkhead homolog 16) (Winged-helix
           transcription factor Trident)
          Length = 760

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 16/46 (34%), Positives = 23/46 (50%)

Query: 45  PESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQ 90
           P S P + Q  SS    R EV   +  P P A  + + + PG+PP+
Sbjct: 114 PSSHPSQPQAHSSRDSKRAEVITETLGPKPAAKGVPVPKPPGAPPR 159



>gi|59803105|sp|Q99687|MEIS3_HUMAN   Homeobox protein Meis3 (Meis1-related protein 2)
          Length = 375

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 41  PASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQTHPL 100
           PASCP S P +       H   G V + +P   P++G LA + G  S  Q   L  +   
Sbjct: 190 PASCP-SLPDQNNMWIRDHEDSGSVHLGTP--GPSSGGLASQSGDNSSDQGDGLDTSVAS 246

Query: 101 PSEPVGSQED 110
           PS   G  ED
Sbjct: 247 PSSG-GEDED 255



>gi|26006805|sp|Q8WNY2|KCNH2_RABIT   Potassium voltage-gated channel subfamily H member 2 (Voltage-gated
            potassium channel subunit Kv11.1) (Ether-a-go-go related
            gene potassium channel 1) (ERG1) (RERG) (ra-erg)
            (Ether-a-go-go related protein 1) (Eag related protein 1)
          Length = 1161

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 42/164 (25%), Positives = 56/164 (34%), Gaps = 33/164 (20%)

Query: 33   TEEPEECGPASCPESAPFRLQGSSSSHRARGEVDVFSPFPAPTAGELALEQGPGSPPQPS 92
            TE+P E          P R     SS    G     SP   P++ E + ++GPG    P 
Sbjct: 901  TEQPGEVSALG-----PGRAGAGPSSRGRPGGPWGESPSSGPSSPESSEDEGPGRSSSPL 955

Query: 93   DL---SQTHPLPSEPVGSQ---EDGPRLRAVFDALDGDGDGFVRIEDFIQFATVYGAEQL 146
             L   S   P P EP G +   ED  +     + L G   G   I  F  +    G +  
Sbjct: 956  RLVPFSSPRP-PGEPPGGEPLTEDCEKSSDTCNPLSGAFSGVSNIFSF--WGDSRGRQYQ 1012

Query: 147  DLTEVSSSPGDTPPGGLIATPPGCLIDVPLNEEVPRDSPTRGPR 190
            +L                   P C    P    +P  SP+R PR
Sbjct: 1013 EL-------------------PRCPAPAPSLLNIPLSSPSRRPR 1037



>gi|41017299|sp|Q14767|LTB2_HUMAN   Latent transforming growth factor-beta-binding protein 2 precursor
           (LTBP-2)
          Length = 1821

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 21/87 (24%)

Query: 51  RLQGSSSSHRARGEVDVFSPF---PAPTAGELALEQ---GPGSPPQPSDLSQTHPLPSE- 103
           RL+    S+ A     V+S F    AP AG   +E+   G GSP +P++     P  ++ 
Sbjct: 52  RLRRPGGSYPAAAAAKVYSLFREQDAPVAGLQPVERAQPGWGSPRRPTEAEARRPSRAQQ 111

Query: 104 --------------PVGSQEDGPRLRA 116
                         P+G Q+  PR RA
Sbjct: 112 SRRVQPPAQTRRSTPLGQQQPAPRTRA 138






  Database: Non-redundant SwissProt sequences
    Posted date:  Mar 15, 2005 10:11 AM
  Number of letters in database: 60,490,055
  Number of sequences in database:  164,271
  
Lambda     K      H
   0.316    0.138    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,141,846
Number of Sequences: 164271
Number of extensions: 317780
Number of successful extensions: 1102
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1088
Number of HSP's gapped (non-prelim): 38
length of query: 228
length of database: 60,490,055
effective HSP length: 106
effective length of query: 122
effective length of database: 43,077,329
effective search space: 5255434138
effective search space used: 5255434138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)