RID=1111068520-20189-48390279685.BLASTQ4, hg16_dna_20|geneid_v1.2_predicted_protein_20|235

BLASTP 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
RID: 1111068520-20189-48390279685.BLASTQ4
Query= hg16_dna_20|geneid_v1.2_predicted_protein_20|235_AA (234 letters)
Database: Non-redundant SwissProt sequences 164,271 sequences; 60,490,055 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Taxonomy reports
Distribution of 23 Blast Hits on the Query Sequence


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|34978537|sp|Q13084|RM28_HUMAN  39S ribosomal protein L28,...   446   e-125 
gi|34925416|sp|Q9D1B9|RM28_MOUSE  39S ribosomal protein L28,...   382   e-106 
gi|34925528|sp|Q9VMX0|RM28_DROME  39S ribosomal protein L28,...   100   4e-21 
gi|6225989|sp|Q9ZE48|RL28_RICPR  50S ribosomal protein L28         43   6e-04 
gi|1350795|sp|P36525|RM24_YEAST  60S ribosomal protein L24, ...    43   7e-04 
gi|20139556|sp|Q92JD1|RL28_RICCN  50S ribosomal protein L28        39   0.014 
gi|18202696|sp|Q9A3I3|YX21_CAUCR  Hypothetical protein CC3221      33   0.45  
gi|131821|sp|P26044|RADI_PIG  Radixin (Moesin B)                   33   0.59  
gi|462608|sp|P26041|MOES_MOUSE  Moesin (Membrane-organizing ...    33   0.59  
gi|32363425|sp|Q9PU45|RADI_CHICK  Radixin                          33   0.59  
gi|32363196|sp|O35763|MOES_RAT  Moesin (Membrane-organizing ...    33   0.59  
gi|32363498|sp|P26043|RADI_MOUSE  Radixin (ESP10)                  33   0.59  
gi|127236|sp|P26042|MOES_PIG  Moesin (Membrane-organizing ex...    32   1.0   
gi|464541|sp|P35241|RADI_HUMAN  Radixin                            32   1.3   
gi|127234|sp|P26038|MOES_HUMAN  Moesin (Membrane-organizing ...    32   1.7   
gi|267350|sp|P29832|VIE3_MCMVS  Immediate-early protein 3 (IE3)    31   2.3   
gi|2494160|sp|Q61712|DNJC1_MOUSE  DnaJ homolog subfamily C m...    31   2.9   
gi|126466|sp|P17589|LRP2_HHV1F  Latency-related protein 2          31   2.9   
gi|543716|sp|P36872|2ABA_DROME  Protein phosphatase PP2A, 55...    30   6.6   
gi|30173209|sp|Q9CDZ7|SYE_LACLA  Glutamyl-tRNA synthetase (G...    30   6.6   
gi|22096068|sp|Q8U9V8|RL28_AGRT5  50S ribosomal protein L28        30   6.6   
gi|48474640|sp|Q9FDL9|RL28_ZYMMO  50S ribosomal protein L28        30   6.6   
gi|3914655|sp|P74240|RIR1_SYNY3  Ribonucleoside-diphosphate ...    29   8.6   


Alignments

>gi|34978537|sp|Q13084|RM28_HUMAN   39S ribosomal protein L28, mitochondrial precursor (L28mt)
           (MRP-L28) (Melanoma antigen p15) (Melanoma-associated
           antigen recognized by T lymphocytes)
          Length = 287

 Score =  446 bits (1147), Expect = e-125
 Identities = 222/256 (86%), Positives = 222/256 (86%), Gaps = 22/256 (8%)

Query: 1   MPLHKYPVWLWKRLQLREGICSRLPGHYLRSLEEERTPTPVHYRPHGAKFKINPKNGQRE 60
           MPLHKYPVWLWKRLQLREGICSRLPGHYLRSLEEERTPTPVHYRPHGAKFKINPKNGQRE
Sbjct: 32  MPLHKYPVWLWKRLQLREGICSRLPGHYLRSLEEERTPTPVHYRPHGAKFKINPKNGQRE 91

Query: 61  RVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILD 120
           RVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILD
Sbjct: 92  RVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILD 151

Query: 121 KKFTVTVTMRTLDLIDEAYGLDFYILK----------------------ASGDPQLHPED 158
           KKFTVTVTMRTLDLIDEAYGLDFYILK                      A  DPQLHPED
Sbjct: 152 KKFTVTVTMRTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPED 211

Query: 159 PERRAAIYDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEKDPVPLFKIYVAEXXXXXXX 218
           PERRAAIYDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEKDPVPLFKIYVAE       
Sbjct: 212 PERRAAIYDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEKDPVPLFKIYVAELIQQLQQ 271

Query: 219 XXXSEPAVVQKRASGQ 234
              SEPAVVQKRASGQ
Sbjct: 272 QALSEPAVVQKRASGQ 287



>gi|34925416|sp|Q9D1B9|RM28_MOUSE   39S ribosomal protein L28, mitochondrial precursor (L28mt)
           (MRP-L28)
          Length = 270

 Score =  382 bits (982), Expect = e-106
 Identities = 187/253 (73%), Positives = 204/253 (80%), Gaps = 22/253 (8%)

Query: 1   MPLHKYPVWLWKRLQLREGICSRLPGHYLRSLEEERTPTPVHYRPHGAKFKINPKNGQRE 60
           MPLH+YPV LW++L+LR+GIC+RLP H+LRSLEEERTPTPVHY+PHG KFKINPKNGQRE
Sbjct: 14  MPLHRYPVHLWQKLRLRQGICARLPAHFLRSLEEERTPTPVHYKPHGTKFKINPKNGQRE 73

Query: 61  RVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILD 120
           RVEDVPIP+++PPESQ+GLWGGEG ILG  YANNDKLSKR+KKVWKPQLF RE YSEILD
Sbjct: 74  RVEDVPIPVHYPPESQQGLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILD 133

Query: 121 KKFTVTVTMRTLDLIDEAYGLDFYILK----------------------ASGDPQLHPED 158
           KKFTVTVTMRTLDLIDEAYG DFYILK                      A  DP LHPE+
Sbjct: 134 KKFTVTVTMRTLDLIDEAYGFDFYILKTPKEDLGSKFGMDLKRGMLLRLARQDPHLHPEN 193

Query: 159 PERRAAIYDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEKDPVPLFKIYVAEXXXXXXX 218
           PERRAAIYDKY+ F IPE EAEWVGLTLEEA+EKQRLLEEKDPVPLFK+YV E       
Sbjct: 194 PERRAAIYDKYRSFVIPEAEAEWVGLTLEEALEKQRLLEEKDPVPLFKVYVEELVQRLQE 253

Query: 219 XXXSEPAVVQKRA 231
              S PAVVQKRA
Sbjct: 254 QVLSRPAVVQKRA 266



>gi|34925528|sp|Q9VMX0|RM28_DROME   39S ribosomal protein L28, mitochondrial precursor (L28mt)
          Length = 302

 Score =  100 bits (248), Expect = 4e-21
 Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 31/225 (13%)

Query: 11  WKRL-QLREGICSRLPGHYLRSLEEER--TPTPVHYRPHGAKFKINPKNGQRERVEDVPI 67
           WKR  +  +G+ ++LP  Y +   E +  TP  VHY P   +++ +      + V+++P+
Sbjct: 15  WKRPGRFDKGLGAQLPEAYRKFWREWKLTTPAAVHYIPKEQQWERDEVTHAIKPVQNIPL 74

Query: 68  PIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTV 127
           P+   PES RG+WGGE  I G  +   ++  +R+   W P L     +S +LD   +V V
Sbjct: 75  PLIDTPESHRGIWGGEAVIKG--FQKREQTKRRVPHFWVPNLRRSVVHSHVLDCYMSVVV 132

Query: 128 TMRTLDLIDEAYGLDFYILK----------------------ASGDPQLHPEDPERRAAI 165
           T RTL+ I E +G D Y+LK                       +G P L  ++PER+  +
Sbjct: 133 TERTLEQIHECHGFDHYLLKNRACDLRSALALKLKREVLQALQNGVPAL-ADEPERQQEV 191

Query: 166 YDKYKEFAIP--EEEAEWVGLTLEEAIEK-QRLLEEKDPVPLFKI 207
             +Y+ +  P   EE +W G T  EAI K Q+ L E + V   K+
Sbjct: 192 LKEYRRYLEPYTPEEIDWYGHTYLEAIRKLQKQLREAEKVVPHKL 236



>gi|6225989|sp|Q9ZE48|RL28_RICPR   50S ribosomal protein L28
          Length = 97

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 87  LGQIYANNDKLSKR-LKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDEAYGLDFYI 145
           +G +Y NN   S+R  ++ ++P L   +F S+I D+ + ++V  R +  +++A G D YI
Sbjct: 10  VGVLYGNNVSHSQRKTRRRFEPNLRSIKFRSDITDEVYRLSVNARCIRSVEKAGGFDAYI 69

Query: 146 LKASGD 151
           LKA+ D
Sbjct: 70  LKANDD 75



>gi|1350795|sp|P36525|RM24_YEAST   60S ribosomal protein L24, mitochondrial precursor (YmL14/YmL24)
          Length = 258

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 5/75 (6%)

Query: 74  ESQRGLWGGEGWILGQIYANNDKLSK-RLKKVWKPQLFEREFYSEILDKKFTVTVTMRTL 132
           +S +GL+GG     G    NN   SK + +K W P + ++  +SE L++K ++ +T + L
Sbjct: 68  QSNKGLYGGSFVQFG----NNISESKAKTRKKWLPNVVKKGLWSETLNRKISIKMTAKVL 123

Query: 133 DLIDEAYGLDFYILK 147
             I +  G+D Y+ K
Sbjct: 124 KTISKEGGIDNYLTK 138



>gi|20139556|sp|Q92JD1|RL28_RICCN   50S ribosomal protein L28
          Length = 97

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 87  LGQIYANNDKLSKR-LKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDEAYGLDFYI 145
           +G +Y NN   S+R  ++ ++P L   +F S+I   ++ ++V  R +  +++A G D YI
Sbjct: 10  VGVLYGNNVSHSQRKTRRRFEPNLRSVKFTSDITAGEYRLSVNARCISSVEKAGGFDAYI 69

Query: 146 LKA 148
           LKA
Sbjct: 70  LKA 72



>gi|18202696|sp|Q9A3I3|YX21_CAUCR   Hypothetical protein CC3221
          Length = 275

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 13/136 (9%)

Query: 79  LWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDEA 138
           +W  + W+      NN   +  L K   P  F   +++  L+       T+    ++ E 
Sbjct: 27  VWPADAWMQALAAENNQAETAYLLKTADPDRFGLRWFTPTLEAPLCGHATLAAAHVLFEE 86

Query: 139 YGLDFYILK----------ASGDPQLH---PEDPERRAAIYDKYKEFAIPEEEAEWVGLT 185
            G+D  +L              D QL    P DP RR  I +   E         W G  
Sbjct: 87  LGVDVAMLSFETLSGVLTVRRADDQLEMDFPADPPRRTEIPEGLAEALGVRPREVWAGAY 146

Query: 186 LEEAIEKQRLLEEKDP 201
           L   ++ +  + +  P
Sbjct: 147 LVAVVDDETTVRQLRP 162



>gi|131821|sp|P26044|RADI_PIG   Radixin (Moesin B)
          Length = 583

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 25/154 (16%)

Query: 70  YFPPESQRG--LWGGEGWILGQIYANNDKLSKRLKKVWKP----QLFEREFYSEILDKKF 123
           YF  ++++G  LW G   +   IY ++DKL+ ++   W         +++F  + +DKK 
Sbjct: 205 YFEIKNKKGTELWLGVDALGLNIYEHDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKA 264

Query: 124 T--------VTVTMRTLDLI---DEAY-------GLDFYILKASGDPQLHPEDPERRAAI 165
                    + +  R L L     E Y        ++   +KA    + H +  ER A +
Sbjct: 265 PDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLER-AQL 323

Query: 166 YDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEK 199
            ++ K+  I E+E E +    EE +E+ R +EE+
Sbjct: 324 ENEKKKREIAEKEKERIEREKEELMERLRQIEEQ 357



>gi|462608|sp|P26041|MOES_MOUSE   Moesin (Membrane-organizing extension spike protein)
          Length = 577

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 25/154 (16%)

Query: 70  YFPPESQRG--LWGGEGWILGQIYANNDKLSKRLKKVWKP----QLFEREFYSEILDKKF 123
           YF  ++++G  LW G   +   IY  ND+L+ ++   W         +++F  + +DKK 
Sbjct: 205 YFSIKNKKGSELWLGVDALGLNIYEQNDRLTPKIGFPWSEIRNISFNDKKFVIKPIDKKA 264

Query: 124 T--------VTVTMRTLDLI---DEAY-------GLDFYILKASGDPQLHPEDPERRAAI 165
                    + +  R L L     E Y        ++   +KA    + H +  ER A +
Sbjct: 265 PDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQMER-ALL 323

Query: 166 YDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEK 199
            ++ K+  + E+E E +    EE +EK + +EE+
Sbjct: 324 ENEKKKRELAEKEKEKIEREKEELMEKLKQIEEQ 357



>gi|32363425|sp|Q9PU45|RADI_CHICK   Radixin
          Length = 583

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 25/154 (16%)

Query: 70  YFPPESQRG--LWGGEGWILGQIYANNDKLSKRLKKVWKP----QLFEREFYSEILDKKF 123
           YF  ++++G  LW G   +   IY ++DKL+ ++   W         +++F  + +DKK 
Sbjct: 205 YFEIKNKKGTELWLGVDALGLNIYEHDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKA 264

Query: 124 T--------VTVTMRTLDLI---DEAY-------GLDFYILKASGDPQLHPEDPERRAAI 165
                    + +  R L L     E Y        ++   +KA    + H +  ER A +
Sbjct: 265 PDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLER-AQL 323

Query: 166 YDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEK 199
            ++ K+  I E+E E +    EE +E+ R +EE+
Sbjct: 324 ENEKKKREIAEKEKERIEREKEELMERLRQIEEQ 357



>gi|32363196|sp|O35763|MOES_RAT   Moesin (Membrane-organizing extension spike protein)
          Length = 577

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 25/154 (16%)

Query: 70  YFPPESQRG--LWGGEGWILGQIYANNDKLSKRLKKVWKP----QLFEREFYSEILDKKF 123
           YF  ++++G  LW G   +   IY  ND+L+ ++   W         +++F  + +DKK 
Sbjct: 205 YFSIKNKKGSELWLGVDALGLNIYEQNDRLTPKIGFPWSEIRNISFNDKKFVIKPIDKKA 264

Query: 124 T--------VTVTMRTLDLI---DEAY-------GLDFYILKASGDPQLHPEDPERRAAI 165
                    + +  R L L     E Y        ++   +KA    + H +  ER A +
Sbjct: 265 PDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQMER-ALL 323

Query: 166 YDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEK 199
            ++ K+  + E+E E +    EE +EK + +EE+
Sbjct: 324 ENEKKKRELAEKEKEKIEREKEELMEKLKQIEEQ 357



>gi|32363498|sp|P26043|RADI_MOUSE   Radixin (ESP10)
          Length = 583

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 25/154 (16%)

Query: 70  YFPPESQRG--LWGGEGWILGQIYANNDKLSKRLKKVWKP----QLFEREFYSEILDKKF 123
           YF  ++++G  LW G   +   IY ++DKL+ ++   W         +++F  + +DKK 
Sbjct: 205 YFEIKNKKGTELWLGVDALGLNIYEHDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKA 264

Query: 124 T--------VTVTMRTLDLI---DEAY-------GLDFYILKASGDPQLHPEDPERRAAI 165
                    + +  R L L     E Y        ++   +KA    + H +  ER A +
Sbjct: 265 PDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLER-AQL 323

Query: 166 YDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEK 199
            ++ K+  I E+E E +    EE +E+ R +EE+
Sbjct: 324 ENEKKKREIAEKEKERIEREKEELMERLRQIEEQ 357



>gi|127236|sp|P26042|MOES_PIG   Moesin (Membrane-organizing extension spike protein)
          Length = 577

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 25/154 (16%)

Query: 70  YFPPESQRG--LWGGEGWILGQIYANNDKLSKRLKKVWKP----QLFEREFYSEILDKKF 123
           YF  ++++G  LW G   +   IY  ND+L+ ++   W         +++F  + +DKK 
Sbjct: 205 YFSSKNKKGSELWLGVDALGLNIYEQNDRLTPKIGFPWSEIRNISFNDKKFVIKPIDKKA 264

Query: 124 T--------VTVTMRTLDLI---DEAY-------GLDFYILKASGDPQLHPEDPERRAAI 165
                    + +  R L L     E Y        ++   +KA    + H +  ER A +
Sbjct: 265 PDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQMER-ALL 323

Query: 166 YDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEK 199
            ++ K+  + E+E E +    EE +E+ + +EE+
Sbjct: 324 ENEKKKREMAEKEKEKIEREKEELMERLKQIEEQ 357



>gi|464541|sp|P35241|RADI_HUMAN   Radixin
          Length = 583

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 25/154 (16%)

Query: 70  YFPPESQRG--LWGGEGWILGQIYANNDKLSKRLKKVWKP----QLFEREFYSEILDKKF 123
           YF  ++++G  LW G   +   IY ++DKL+ ++   W         +++F  + +DKK 
Sbjct: 205 YFEIKNKKGTELWLGVDALGLNIYEHDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKA 264

Query: 124 T--------VTVTMRTLDLI---DEAY-------GLDFYILKASGDPQLHPEDPERRAAI 165
                    + +  R L L     E Y        ++   +KA    + H +  ER A +
Sbjct: 265 PDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLER-AQL 323

Query: 166 YDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEK 199
            ++ K+  I E+E E +    EE +E+ + +EE+
Sbjct: 324 ENEKKKREIAEKEKERIEREKEELMERLKQIEEQ 357



>gi|127234|sp|P26038|MOES_HUMAN   Moesin (Membrane-organizing extension spike protein)
          Length = 577

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 25/154 (16%)

Query: 70  YFPPESQRG--LWGGEGWILGQIYANNDKLSKRLKKVWKP----QLFEREFYSEILDKKF 123
           YF  ++++G  LW G   +   IY  ND+L+ ++   W         +++F  + +DKK 
Sbjct: 205 YFSIKNKKGSELWLGVDALGLNIYEQNDRLTPKIGFPWSEIRNISFNDKKFVIKPIDKKA 264

Query: 124 T--------VTVTMRTLDLI---DEAY-------GLDFYILKASGDPQLHPEDPERRAAI 165
                    + +  R L L     E Y        ++   +KA    + H +  ER A +
Sbjct: 265 PDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQMER-AML 323

Query: 166 YDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEK 199
            ++ K+  + E+E E +    EE +E+ + +EE+
Sbjct: 324 ENEKKKREMAEKEKEKIEREKEELMERLKQIEEQ 357



>gi|267350|sp|P29832|VIE3_MCMVS   Immediate-early protein 3 (IE3)
          Length = 611

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 36  RTPTPVHYRPHGAKFKINPKNGQRERVEDVPIPIYFPPESQ 76
           R P    +R H  K     KN QR+R++DV   ++ P ES+
Sbjct: 128 RRPNTPDFRRHSEKKAKKHKNKQRQRLDDVVAKLHKPSESE 168



>gi|2494160|sp|Q61712|DNJC1_MOUSE   DnaJ homolog subfamily C member 1 (DnaJ protein homolog MTJ1)
          Length = 552

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 166 YDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEKDPVPLFKIYV 209
           Y KYKE  + E+E     + +E  ++KQ+ ++ K P P F +Y+
Sbjct: 245 YAKYKETKLKEKEDALARIEIE-TLQKQKKVKVKKPKPEFPVYM 287



>gi|126466|sp|P17589|LRP2_HHV1F   Latency-related protein 2
          Length = 107

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 5/44 (11%)

Query: 36 RTPTPVHYRPHGAKFKINPKNGQRERVEDVPIPIYFPPESQRGL 79
          RTPTP H   H       P++ Q  + +D  + +YFP +S+  L
Sbjct: 39 RTPTPTHPHSHAP-----PRSIQHRQGKDTKVNLYFPIDSKNPL 77



>gi|543716|sp|P36872|2ABA_DROME   Protein phosphatase PP2A, 55 kDa regulatory subunit (Protein
           phosphatase PP2A regulatory subunit B) (PR55) (Twins
           protein)
          Length = 499

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 151 DPQLHPEDPERRAAIYDKYKEFAIPEEEAEWV-GLTLEEAIEKQRLLEEKDPV 202
           DP     +P R    Y+ Y  F   E E +++  L +EE I K R L++K+PV
Sbjct: 111 DPASKAANPRRGE--YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLQQKNPV 161



>gi|30173209|sp|Q9CDZ7|SYE_LACLA   Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS)
          Length = 483

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 12/71 (16%)

Query: 139 YGLDFYILKASGDPQLHPEDPERRAAIYDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEE 198
           +G DF I     D + H ED ER               E   W+G+  +E+ E      +
Sbjct: 35  HGGDFIIRIEDTDRERHVEDGERSQL------------ENLRWLGMDWDESPETHENYRQ 82

Query: 199 KDPVPLFKIYV 209
            + +PL++ Y+
Sbjct: 83  SERLPLYQKYI 93



>gi|22096068|sp|Q8U9V8|RL28_AGRT5   50S ribosomal protein L28
          Length = 96

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)

Query: 93  NNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDEAYGLDFYILKASGDP 152
           N    + + K+ + P L +    S+ L ++F + V+   L  ++   GLD ++LK SG+ 
Sbjct: 17  NVSHANNKTKRRFLPNLCQVTLISDALGQRFRLRVSAAALRSVEHRGGLDAFLLK-SGEN 75

Query: 153 QLHPEDPERRAAIYDKYKEFA 173
           +L       R  I  K  E A
Sbjct: 76  ELSMRARLLRRQIAKKTAEAA 96



>gi|48474640|sp|Q9FDL9|RL28_ZYMMO   50S ribosomal protein L28
          Length = 95

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 17/63 (26%), Positives = 29/63 (46%)

Query: 89  QIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDEAYGLDFYILKA 148
           Q+  N    + R K+ + P L      S+ L K  T+ V+   L  ++   GLD ++LK 
Sbjct: 13  QVGNNVSHANNRTKRTFLPNLQNVTLISDALGKGVTLRVSTHGLRSVEHVGGLDNWLLKT 72

Query: 149 SGD 151
             +
Sbjct: 73  KNE 75



>gi|3914655|sp|P74240|RIR1_SYNY3   Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
           reductase)
          Length = 767

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 51  KINPKNG-QRERVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQL 109
           ++  +NG QR +  D+   +  P E  R +   E W L   Y   +K+   L ++W  Q 
Sbjct: 337 EMQAENGDQRRKAYDIFPQLILPDEFMRRVINKEDWTLVDPYEVREKMGIELAELWGEQ- 395

Query: 110 FEREFYSEILDKKFTVTVTM 129
           FE   Y EI +     T+T+
Sbjct: 396 FEGA-YREI-ESNLDTTITL 413






  Database: Non-redundant SwissProt sequences
    Posted date:  Mar 15, 2005 10:11 AM
  Number of letters in database: 60,490,055
  Number of sequences in database:  164,271
  
Lambda     K      H
   0.318    0.139    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,705,901
Number of Sequences: 164271
Number of extensions: 266285
Number of successful extensions: 501
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 496
Number of HSP's gapped (non-prelim): 4
length of query: 234
length of database: 60,490,055
effective HSP length: 106
effective length of query: 128
effective length of database: 43,077,329
effective search space: 5513898112
effective search space used: 5513898112
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)