BLASTP 2.2.10 [Oct-19-2004]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1111067562-11108-95655966352.BLASTQ2

Query= hg16_dna|GENSCAN_predicted_peptide_14|636_aa
         (636 letters)


Database: Non-redundant SwissProt sequences 
           164,271 sequences; 60,490,055 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs

Taxonomy reports

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|1703162|sp|Q01757|ACVS_STRCL  N-(5-amino-5-carboxypentano...    35   0.47  
gi|57013101|sp|Q9GLK0|TGM1_CANFA  Protein-glutamine gamma-gl...    35   0.80  
gi|585414|sp|P36775|LONM_YEAST  Lon protease homolog, mitoch...    33   2.3   
gi|120093|sp|P02674|FIBA1_PETMA  Fibrinogen alpha-1 chain pr...    32   5.2   


Alignments

>gi|1703162|sp|Q01757|ACVS_STRCL   N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase
           (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine
           synthetase) (ACV synthetase) (ACVS)
          Length = 805

 Score = 35.4 bits (80), Expect = 0.47
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 515 YMFHPTLPRVLLELANVSTHIVAFDAVLFEPSRHAAYILLTGPADSEAPGLVSVIKH-KV 573
           Y+F P L + L+ L N  T +V  + V  +P R  AYI   G     A G  SV++H  +
Sbjct: 469 YVFEPHLRQTLIALINGQTLVVVPEEVRLDPDRFPAYIEEHGVTYLNATG--SVLQHFDL 526

Query: 574 RDLVPSSRVVRLGEGGPDSD-QAIRDRFS 601
           R      R++ +GE    +  + +R+RFS
Sbjct: 527 RRRTSLKRLLLVGEELTAAGLRQLRERFS 555



>gi|57013101|sp|Q9GLK0|TGM1_CANFA   Protein-glutamine gamma-glutamyltransferase K (Transglutaminase K)
           (TGase K) (TGK) (TG(K)) (Transglutaminase 1) (Epidermal
           TGase)
          Length = 815

 Score = 34.7 bits (78), Expect = 0.80
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 10/101 (9%)

Query: 161 LAVDDINGDRIQD-VLFLYKNTNSSNNFSRSCVDEAAVSGANGSTLWERPVAQDVALVEC 219
           L V    G  +QD V  +YK+   S    R  V+ AA  G+  +    R  A+DVAL   
Sbjct: 524 LIVTKAVGSNMQDDVTHIYKHPEGSEA-ERKAVETAAAHGSKPNVYTNRDSAEDVALQVE 582

Query: 220 AVPQPRGSEAPSACILVGRPSS--------FIAVNLFTGET 252
           A     G +   + +L  R SS        +++V  +TG T
Sbjct: 583 AQDAVMGQDLTVSVVLTNRGSSTRTVKLHLYLSVTFYTGVT 623



>gi|585414|sp|P36775|LONM_YEAST   Lon protease homolog, mitochondrial precursor
          Length = 1133

 Score = 33.1 bits (74), Expect = 2.3
 Identities = 16/50 (32%), Positives = 28/50 (56%)

Query: 63  DVPVMLDHKDLEAEIHPLKNEERKSQENLGNPSKNEDNVKSAPPQSRLSR 112
           DV ++ D KD + ++ P +++E  +++  G  SKN  +  S   QS  SR
Sbjct: 110 DVKIVPDEKDTDNDVEPTRDDEIVNKDQEGEASKNSRSSASGGGQSSSSR 159



>gi|120093|sp|P02674|FIBA1_PETMA   Fibrinogen alpha-1 chain precursor [Contains: Fibrinopeptide A]
          Length = 966

 Score = 32.0 bits (71), Expect = 5.2
 Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 15/155 (9%)

Query: 249 TGETLWNHSSSFSGNASILSPLLQVPDVDGDGAPDLL-VLTQEREEVSGHLYSGSTGHQI 307
           +G T  + + S SG  S L  L  +PD      PD   + ++ R   S    S S G   
Sbjct: 790 SGSTSTHSAHSASGGMSSLDMLPALPDFGTWDMPDHSDIFSRRRVSTSSTTSSSSGGGHA 849

Query: 308 GLRGSLGVDGESGF-LLHVTRTGAHY-----ILFPCASSLCGCSVKGLYEKVTGSGGPFK 361
           G     G DG S F  L  T  G  +      + P AS L   S        + SGG   
Sbjct: 850 GAAAGGGGDGASRFGSLFTTDFGPEFHEEFRSMLPGASRLSSSSSSSTRSTSSTSGG--- 906

Query: 362 SDPHWESMLNATTRRMLSHSSGAVRYLMHVPGNAG 396
                + +  +   ++LS+ +    +  HV  + G
Sbjct: 907 -----KVVTESVVTKVLSNGTTITHHTKHVSTSDG 936






  Database: Non-redundant SwissProt sequences
    Posted date:  Mar 15, 2005 10:11 AM
  Number of letters in database: 60,490,055
  Number of sequences in database:  164,271
  
Lambda     K      H
   0.319    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,567,602
Number of Sequences: 164271
Number of extensions: 591936
Number of successful extensions: 1195
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1194
Number of HSP's gapped (non-prelim): 2
length of query: 636
length of database: 60,490,055
effective HSP length: 116
effective length of query: 520
effective length of database: 41,434,619
effective search space: 21546001880
effective search space used: 21546001880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)