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BLASTP 2.2.10 [Oct-19-2004]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1111160964-14022-59755812096.BLASTQ4

Query= GENEid (9): 348 AA (347 letters)

Database: Non-redundant SwissProt sequences 164,271 sequences; 60,490,055 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs

Taxonomy reports

Distribution of 21 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11182425|sp|P56524|HDAC4_HUMAN  Histone deacetylase 4 (HD4)     33   0.19  Gene info
gi|47117817|sp|O75376|NCOR1_HUMAN  Nuclear receptor corepres...    30   0.92  Gene info
gi|1346190|sp|P48506|GSH1_HUMAN  Glutamate--cysteine ligase ...    30   1.6   Gene info
gi|60416377|sp|Q96JP5|ZFP91_HUMAN  Zinc finger protein 91 ho...    29   2.1   
gi|29839632|sp|Q9GZW5|SDP2_HUMAN  SCAN domain-containing pro...    29   2.1   Gene info
gi|25089623|sp|Q9P0M2|AK7G_HUMAN  A-kinase anchor protein 7 ...    29   2.1   Gene info
gi|60390855|sp|Q8TF74|WIRE_HUMAN  WIP-related protein (WIP- ...    29   2.1   
gi|47606791|sp|Q96GP6|SRC2_HUMAN  Scavenger receptor class F...    29   2.1   Gene info
gi|730328|sp|Q06889|EGR3_HUMAN  Early growth response protei...    29   2.7   Gene info
gi|8928360|sp|Q9Z0H3|SNF5_MOUSE  SWI/SNF related, matrix ass...    29   2.7   Gene info
gi|13124503|sp|O60315|SIP1_HUMAN  Zinc finger homeobox prote...    29   2.7   Gene info
gi|20140764|sp|Q9C0J8|WD33_HUMAN  WD-repeat protein 33 (WD-r...    29   2.7   Gene info
gi|30316390|sp|Q9NTI2|AT8A2_HUMAN  Potential phospholipid-tr...    28   3.5   Gene info
gi|51338794|sp|P78559|MAP1A_HUMAN  Microtubule-associated pr...    28   3.5   Gene info
gi|13124645|sp|O75038|Y450_HUMAN  Hypothetical protein KIAA0450    28   4.6   Gene info
gi|3929376|sp|Q12872|SFRS8_HUMAN  Splicing factor, arginine/...    28   6.0   Gene info
gi|2498017|sp|Q16665|HIF1A_HUMAN  Hypoxia-inducible factor 1...    28   6.0   Gene info
gi|52000873|sp|Q70EK9|UBP51_HUMAN  Ubiquitin carboxyl-termin...    28   6.0   Gene info
gi|57012964|sp|Q92922|SMRC1_HUMAN  SWI/SNF-related matrix-as...    28   6.0   
gi|38258418|sp|Q15637|SF01_HUMAN  Splicing factor 1 (Zinc fi...    27   7.8   Gene info
gi|21542178|sp|Q96BK5|PII1_HUMAN  Pin2-interacting protein X...    27   7.8   Gene info
Alignments
>gi|11182425|sp|P56524|HDAC4_HUMAN  Gene info Histone deacetylase 4 (HD4)
          Length = 1084

 Score = 32.7 bits (73), Expect = 0.19
 Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 29/171 (16%)

Query: 139 VKLAFREEQKGSDENEEPMMSPDERRKKTRCLRRPKVFATLSC---PLTSKWSPSRQSAF 195
           +KL  R +QK ++    P++   +    T   +RP      +C   P +   SP+  S  
Sbjct: 250 LKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSGPSSPNNSSG- 308

Query: 196 WEWEMMGKEERIVRSPDPGLEKFCAPLGLCGPFASTDLSLPRLPLHSDPAFPSVNQNITN 255
                +  E  I     P +    A   L     + + S   LPL++ P+ P++   +  
Sbjct: 309 ----SVSAENGIA----PAVPSIPAETSLAHRLVAREGSAAPLPLYTSPSLPNITLGL-- 358

Query: 256 CLRIRPTSSPKPGCDRRKPKPELT----------FPRTRRAPWTRRNPAEK 296
                P + P  G   ++    LT          FP T   P+   +P E+
Sbjct: 359 -----PATGPSAGTAGQQDTERLTLPALQQRLSLFPGTHLTPYLSTSPLER 404
>gi|47117817|sp|O75376|NCOR1_HUMAN  Gene info Nuclear receptor corepressor 1 (N-CoR1) (N-CoR)
          Length = 2440

 Score = 30.4 bits (67), Expect = 0.92
 Identities = 50/208 (24%), Positives = 77/208 (37%), Gaps = 35/208 (16%)

Query: 2    PIVDFHLQKLPAAAAAPFLDKSHSSSPGSPKTAELFFTERTPW-------FHQFPQIPVA 54
            P + FH    PAAAA  F  +  S +PG P   +L+  E T           Q  Q+ + 
Sbjct: 1570 PAMPFHRALDPAAAAYLF-QRQLSPTPGYPSQYQLYAMENTRQTILNDYITSQQMQVNLR 1628

Query: 55   PDLSSRGTRRKD------FLSTRRILGAAKV-PVVSFYHSRGVLLKASERAS--GGSKAV 105
            PD+ +RG   ++      + +TR I+    + P +   H  G      +R +   G++  
Sbjct: 1629 PDV-ARGLSPREQPLGLPYPATRGIIDLTNMPPTILVPHPGGTSTPPMDRITYIPGTQIT 1687

Query: 106  QPGRKVRNIVGKKRHQNHRIERKIIEEMYLPVRVKLAFREE----------QKGSDENEE 155
             P R   +      H  H       E      R K   RE           + GS++   
Sbjct: 1688 FPPRPYNSASMSPGHPTHLAAAASAEREREREREKERERERIAAASSDLYLRPGSEQPGR 1747

Query: 156  P-------MMSPDERRKKTRCLRRPKVF 176
            P         SP  R ++T   +RP VF
Sbjct: 1748 PGSHGYVRSPSPSVRTQETMLQQRPSVF 1775
>gi|1346190|sp|P48506|GSH1_HUMAN  Gene info Glutamate--cysteine ligase catalytic subunit
           (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS
           heavy chain)
          Length = 637

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 118 KRHQNHRIERKIIEEMYLPVRVKLAFREEQKGSDENEEPMMSPDERRKKTR-CLRRPKVF 176
           KRH +H     I++ +++   VK   ++  K  DE E  ++S D   KK R  L   KV 
Sbjct: 16  KRHADHVRRHGILQFLHIYHAVKDRHKDVLKWGDEVEYMLVSFDHENKKVRLVLSGEKVL 75

Query: 177 ATL 179
            TL
Sbjct: 76  ETL 78
>gi|60416377|sp|Q96JP5|ZFP91_HUMAN   Zinc finger protein 91 homolog (Zfp-91) (FKSG11 protein)
          Length = 570

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 117 KKRHQNHRIERKIIEEMYLPVRVKLAFREEQKGSDENEEPMMSPDERRKKTRCLRRPK 174
           K R ++ +++ +  E+  + V V++  +EE+    E+EEP      RRK  +  R PK
Sbjct: 245 KPRRKSGKVKEEK-EKKEIKVEVEVEVKEEENEIREDEEPPRKRGRRRKDDKSPRLPK 301
>gi|29839632|sp|Q9GZW5|SDP2_HUMAN  Gene info SCAN domain-containing protein 2
          Length = 306

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 260 RPTSSPKPGCDRRKPKPELTFPRTRRAPW 288
           +P   P P    R+P+P L  PR  + PW
Sbjct: 254 QPRQRPSPRPTPRRPRPRLARPRAGQKPW 282
>gi|25089623|sp|Q9P0M2|AK7G_HUMAN  Gene info A-kinase anchor protein 7 isoform gamma (Protein kinase A anchoring
           protein 7 isoform gamma) (A-kinase anchoring protein 18)
          Length = 326

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 270 DRRKPKPELTFPRTRRAPWTRRNPAEK 296
           + R  KP LTF +  ++PW R+N  +K
Sbjct: 190 ESRSFKPHLTFMKLSKSPWLRKNGVKK 216
>gi|60390855|sp|Q8TF74|WIRE_HUMAN   WIP-related protein (WIP- and CR16-homologous protein) (PP10631)
          Length = 440

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 5/74 (6%)

Query: 230 STDLSLPRLPLHSDPAFPSVNQ-NITNCLRIRPTSS----PKPGCDRRKPKPELTFPRTR 284
           S+  SLP LP    P+ P +++ N T+   ++ +SS    P PG     P   L    ++
Sbjct: 140 SSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSSSAPPPPPPGRRANAPPTPLPMHSSK 199

Query: 285 RAPWTRRNPAEKAP 298
              + R  P    P
Sbjct: 200 APAYNREKPLPPTP 213
>gi|47606791|sp|Q96GP6|SRC2_HUMAN  Gene info Scavenger receptor class F member 2 precursor (Scavenger receptor
           expressed by endothelial cells 2 protein) (SREC-II)
           (SRECRP-1)
          Length = 866

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 10/62 (16%)

Query: 220 APLGLCGPFASTDLSLPRLPLHSDPAFPSV------NQNITNCLRIRPTS---SPKPGCD 270
           AP  LCG F+   + LPR+PL      P V        N  NC  + P S    P P   
Sbjct: 484 APHRLCGRFSRISMKLPRIPLRRQ-KLPKVVVAHHDLDNTLNCSFLEPPSGLEQPSPSWS 542

Query: 271 RR 272
            R
Sbjct: 543 SR 544
>gi|730328|sp|Q06889|EGR3_HUMAN  Gene info Early growth response protein 3 (EGR-3) (Zinc finger protein pilot)
          Length = 387

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 32/91 (35%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 234 SLPRLPLHSDPAFPSV--NQNITNCLRIRPTSSPKPGCDRR-KPKPELTFP---RTRRAP 287
           SLP+ PL   P  P    N+     L  RP + P  GCDRR     ELT      T   P
Sbjct: 245 SLPQPPLTLKPIRPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKP 304

Query: 288 WTRRNPAEKAPRSDLRTLCIQRTVVSEKAYS 318
           +  R       RSD  T  I RT   EK ++
Sbjct: 305 FQCRICMRSFSRSDHLTTHI-RTHTGEKPFA 334
>gi|8928360|sp|Q9Z0H3|SNF5_MOUSE  Gene info SWI/SNF related, matrix associated, actin dependent regulator of
           chromatin subfamily B member 1 (Integrase interactor 1
           protein) (mSNF5)
 gi|51338799|sp|Q12824|SNF5_HUMAN  Gene info SWI/SNF related, matrix associated, actin dependent regulator of
           chromatin subfamily B member 1 (Integrase interactor 1
           protein) (hSNF5) (BAF47)
          Length = 385

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 4/36 (11%)

Query: 196 WEWEMMGKEERIVRSPDPGLEKFCAPLGLCGPFAST 231
           +EW+M  KE     SP+    K C+ LGL G F +T
Sbjct: 279 FEWDMSEKEN----SPEKFALKLCSELGLGGEFVTT 310
>gi|13124503|sp|O60315|SIP1_HUMAN  Gene info Zinc finger homeobox protein 1b (Smad interacting protein 1)
           (SMADIP1) (HRIHFB2411)
          Length = 1214

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 5/65 (7%)

Query: 197 EWEMMGKEERIVRSPDPGLEKFCAPLGLCGPFASTDLSLPRLPLH-----SDPAFPSVNQ 251
           EW    K  +   S  P LE+   PL       + D  LPR P+      + P+   ++ 
Sbjct: 690 EWFEQRKVYQYSNSRSPSLERSSKPLAPNSNPPTKDSLLPRSPVKPMDSITSPSIAELHN 749

Query: 252 NITNC 256
           ++TNC
Sbjct: 750 SVTNC 754
>gi|20140764|sp|Q9C0J8|WD33_HUMAN  Gene info WD-repeat protein 33 (WD-repeat protein WDC146)
          Length = 1336

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 13/31 (41%), Positives = 20/31 (64%)

Query: 129 IIEEMYLPVRVKLAFREEQKGSDENEEPMMS 159
           +I  M +P ++KLA  +EQ G DE+ E  M+
Sbjct: 440 VIPGMGIPEQLKLAMEQEQMGKDESNEIEMT 470
>gi|30316390|sp|Q9NTI2|AT8A2_HUMAN  Gene info Potential phospholipid-transporting ATPase IB (ATPase class I type 8A
            member 2) (ML-1)
          Length = 1148

 Score = 28.5 bits (62), Expect = 3.5
 Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 30/168 (17%)

Query: 23   SHSSSPGSPKTAELFF-TERTPWFHQFPQIPVAPDLSSRGTRRKDFLSTRRILGAAKVPV 81
            SH +  GS  T  +FF    T W    P IP+APD+  RG       S    LG   VP 
Sbjct: 987  SHLAVWGSMLTWLVFFGIYSTIW----PTIPIAPDM--RGQATMVLSSAHFWLGLFLVPT 1040

Query: 82   VSF----------YHSRGVLLKASERASGGSKAVQPGRKV-RNIVGKKRHQNHRIERKII 130
                         +  +  LL+  +     S+ +  G+ V R+  GK+ ++  R+ +++ 
Sbjct: 1041 ACLIEDVAWRAAKHTCKKTLLEEVQELETKSRVL--GKAVLRDSNGKRLNERDRLIKRLG 1098

Query: 131  EE----------MYLPVRVKLAFREEQKGSDENEEPMMSPDERRKKTR 168
             +          +   V    AF +E+ G+   EE + + D  +KK+R
Sbjct: 1099 RKTPPTLFRGSSLQQGVPHGYAFSQEEHGAVSQEEVIRAYDTTKKKSR 1146
>gi|51338794|sp|P78559|MAP1A_HUMAN  Gene info Microtubule-associated protein 1A (MAP 1A) (Proliferation-related
            protein p80) [Contains: MAP1 light chain LC2]
          Length = 2805

 Score = 28.5 bits (62), Expect = 3.5
 Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 14/123 (11%)

Query: 144  REEQKGSDENEEPMMSPDERRKKTRCLRRPKVFATLSCPLTSKWSPSRQSAFWEWEMMGK 203
            RE   G+  +  P +S     K+    R       LS P++ K   S    F    + G 
Sbjct: 1986 REPPLGAAGDWPPCLST----KEAAAGRNTSAEKELSSPISPKSLQSDTPTFSYAALAGP 2041

Query: 204  EERIVRSPDPGLEKFCAPLGLCGPFASTDLSLPRLPLHSDPAFPSVNQNITNCLRIRPTS 263
                   P P +E    P  +           PR P+ S    P +N NI +C   R + 
Sbjct: 2042 TVPPRXEPGPSMEPSLTPPAVP----------PRAPILSKGPSPPLNGNILSCSPDRRSP 2091

Query: 264  SPK 266
            SPK
Sbjct: 2092 SPK 2094
>gi|13124645|sp|O75038|Y450_HUMAN  Gene info Hypothetical protein KIAA0450
          Length = 425

 Score = 28.1 bits (61), Expect = 4.6
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 3/35 (8%)

Query: 244 PAFPSVNQNITNCLRIRPTSSPKPGCDRRKPKPEL 278
           PA PSV+Q I       PT S KPG   R+  PEL
Sbjct: 130 PARPSVSQRILRRTASAPTKSQKPG---RRGFPEL 161
>gi|3929376|sp|Q12872|SFRS8_HUMAN  Gene info Splicing factor, arginine/serine-rich 8 (Suppressor of white
           apricot protein homolog)
          Length = 951

 Score = 27.7 bits (60), Expect = 6.0
 Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 17/115 (14%)

Query: 85  YHSRGVLLKASERASGGSKAVQPG-----RKVRNIVGKKRHQNHRIERKIIEEMYLPVRV 139
           YHS     K+  R+   +K   P      R+ R+     R + H  ER+  EE  +P   
Sbjct: 774 YHSSS---KSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRR-EERSVPTAY 829

Query: 140 KLAFREEQKGSDENEEPMMSPDERRKKTRCLRRPKVFATLSCPLTSKWSPSRQSA 194
           +++      G+        SP E++KK R   R K     S   +   SPS+Q+A
Sbjct: 830 RVS---RSPGASRKRTRSRSPHEKKKKRRSRSRTK-----SKARSQSVSPSKQAA 876
>gi|2498017|sp|Q16665|HIF1A_HUMAN  Gene info Hypoxia-inducible factor 1 alpha (HIF-1 alpha) (HIF1 alpha) (ARNT
           interacting protein) (Member of PAS protein 1) (MOP1)
          Length = 826

 Score = 27.7 bits (60), Expect = 6.0
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 232 DLSLPRLPLHSDPAFPSVNQNITNCLRIRPTSSPKPGCDRRKP 274
           D  L  +PL++D   PS N+ + N   I    SP P  +  KP
Sbjct: 422 DQQLEEVPLYNDVMLPSPNEKLQN---INLAMSPLPTAETPKP 461
>gi|52000873|sp|Q70EK9|UBP51_HUMAN  Gene info Ubiquitin carboxyl-terminal hydrolase 51 (Ubiquitin thiolesterase
           51) (Ubiquitin-specific processing protease 51)
           (Deubiquitinating enzyme 51)
          Length = 711

 Score = 27.7 bits (60), Expect = 6.0
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)

Query: 250 NQNITNCLRIRPTSSPKPGCDRRKPKPELTFPRTRRAPWTRRNPAEKAP 298
           ++ +   + +R  SS  P C RRKP+P    PR R    +R  P   AP
Sbjct: 80  DEKVLPSIPLRCHSSSSPVCPRRKPRPR-PQPRAR----SRSQPGLSAP 123
>gi|57012964|sp|Q92922|SMRC1_HUMAN   SWI/SNF-related matrix-associated actin-dependent regulator of
           chromatin subfamily C member 1 (SWI/SNF complex 155 kDa
           subunit) (BRG1-associated factor 155)
          Length = 1105

 Score = 27.7 bits (60), Expect = 6.0
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 138 RVKLAFREEQKGSDENEEPMMSPDERRKKTRCLRRPKVFATLSCPLTSKWSPSRQSAFWE 197
           R  ++FR  Q+ S +NEEP+ SP+ R +K     R +  +    P T   S  +     +
Sbjct: 291 RKPVSFR--QRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQ 348

Query: 198 WEMMGK 203
             + GK
Sbjct: 349 ASLYGK 354
>gi|38258418|sp|Q15637|SF01_HUMAN  Gene info Splicing factor 1 (Zinc finger protein 162) (Transcription factor
           ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian branch
           point binding protein mBBP) (BBP)
          Length = 639

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 263 SSPKPGCDRRKPKPELTFPRTR-RAPWTRRNPAEKAP 298
           S+P+P      P P      T+ R PW    P+E  P
Sbjct: 342 SAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRP 378
>gi|21542178|sp|Q96BK5|PII1_HUMAN  Gene info Pin2-interacting protein X1 (TRF1-interacting protein 1)
           (Liver-related putative tumor suppressor) (67-11-3
           protein)
          Length = 328

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 9   QKLPAAAAAPFLDKSHSSSPGSPKTAELFFTERTPWFHQFPQIPV-APDLSSRGTRRK 65
           +K P   A+P   + + ++  S  T + +F +R       PQ+PV   D+S     RK
Sbjct: 153 KKTPEGDASPSTPEENETTTTSAFTIQEYFAKRMAALKNKPQVPVPGSDISETQVERK 210
  Database: Non-redundant SwissProt sequences
    Posted date:  Mar 15, 2005 10:11 AM
  Number of letters in database: 60,490,055
  Number of sequences in database:  164,271
  
Lambda     K      H
   0.320    0.135    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 939,778
Number of Sequences: 164271
Number of extensions: 49013
Number of successful extensions: 200
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 196
Number of HSP's gapped (non-prelim): 6
length of query: 347
length of database: 6,424,444
effective HSP length: 96
effective length of query: 251
effective length of database: 5,281,564
effective search space: 1325672564
effective search space used: 1325672564
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)