BLASTN 2.2.10 [Oct-19-2004]
RID: 1111393444-22301-26902388652.BLASTQ2 Database: GenBank Human EST entries 6,053,087 sequences; 3,217,442,574 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports Query= Reg1.2130-138441 (138,441 letters)
Database: GenBank Human EST entries 6,053,087 sequences; 3,217,442,574 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports Query= Reg1.2130-138441 (138,441 letters)
Score E Sequences producing significant alignments: (bits) Value gi|6590772|gb|AW247779.1| 2820058.5prime NIH_MGC_7 Homo sap... 892 0.0 gi|2896263|gb|AA824379.1| aj29b07.s1 Soares_testis_NHT Homo... 700 0.0 gi|1994024|gb|AA341605.1| EST47193 Fetal kidney II Homo sap... 525 e-144 gi|27825730|emb|BX093419.1| BX093419 Soares_testis_NHT Homo... 446 e-120 gi|27880001|emb|BX115202.1| BX115202 Soares_NFL_T_GBC_S1 Ho... 304 9e-78 gi|3145227|gb|AA972463.1| op41d04.s1 Soares_NFL_T_GBC_S1 Ho... 296 2e-75 gi|2054669|gb|AA400790.1| zt71f07.s1 Soares_testis_NHT Homo... 277 1e-69 gi|3244711|gb|AI027195.1| ov83a07.x1 Soares_testis_NHT Homo... 206 3e-48 Alignments
Score E Sequences producing significant alignments: (bits) Value gi|6590772|gb|AW247779.1| 2820058.5prime NIH_MGC_7 Homo sap... 892 0.0 gi|2896263|gb|AA824379.1| aj29b07.s1 Soares_testis_NHT Homo... 700 0.0 gi|1994024|gb|AA341605.1| EST47193 Fetal kidney II Homo sap... 525 e-144 gi|27825730|emb|BX093419.1| BX093419 Soares_testis_NHT Homo... 446 e-120 gi|27880001|emb|BX115202.1| BX115202 Soares_NFL_T_GBC_S1 Ho... 304 9e-78 gi|3145227|gb|AA972463.1| op41d04.s1 Soares_NFL_T_GBC_S1 Ho... 296 2e-75 gi|2054669|gb|AA400790.1| zt71f07.s1 Soares_testis_NHT Homo... 277 1e-69 gi|3244711|gb|AI027195.1| ov83a07.x1 Soares_testis_NHT Homo... 206 3e-48
>gi|6590772|gb|AW247779.1| 2820058.5prime NIH_MGC_7 Homo sapiens cDNA clone IMAGE:2820058 5', mRNA sequence. Length = 565 Score = 892 bits (464), Expect = 0.0 Identities = 473/477 (99%), Gaps = 1/477 (0%) Strand = Plus / Minus Query: 70020 ggccatgttgctctgggcaacaacatcaggttctatcccctcttctctccccacttacgg 70079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 ggccatgttgctctgggcaacaacatcaggttctatcccctcttctctccccacttacgg 427 Query: 70080 ggtgaccctcttggaggcctctcagttgcgcaacctcacaccccaatgccatacagagtt 70139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 ggtgaccctcttggaggcctctcagttgcgcaacctcacaccccaatgccatacagagtt 367 Query: 70140 tcttacgaagtggctctttctcaccaccctttttatttttccctggagcccagagacaca 70199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 tcttacgaagtggctctttctcaccaccctttttatttttccctggagcccagagacaca 307 Query: 70200 gcccggttgtaggcatgggggtgaggggtgttatcagccaaggacacaacagcgtactgg 70259 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 306 gcccggtcgtaggcatgggggtgaggggtgttaccagccaaggacacaacagcgtactgg 247 Query: 70260 aatacagtggcttctaaaaccacctgtggaaaagaaccaaatgcaatatccccatcagtc 70319 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 246 aatacagtggcttctaaaaccacctgtgggaaagaaccaaatgcaatatccccatcagtc 187 Query: 70320 tcccacagcccaaacactgcaaaattctagaggtcgccaaggaccacag-tcgccagaaa 70378 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 186 tcccacagcccaaacactgcaaaattctagaggtcgccaaggaccacaggtcgccagaaa 127 Query: 70379 caatgacttcatttgggtctttctcatttagtctttctgaggtgttggacggcagtgaca 70438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 caatgacttcatttgggtctttctcatttagtctttctgaggtgttggacggcagtgaca 67 Query: 70439 ccttctcaaggtcactctccgggccgcatgacctggcgctccccaggcttccctgct 70495 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 ccttctcaaggtcactctccgggccgcatgacctggcgctccccaggcttccctgct 10
>gi|2896263|gb|AA824379.1| aj29b07.s1 Soares_testis_NHT Homo sapiens cDNA clone 1391701 3', mRNA sequence. Length = 564 Score = 700 bits (364), Expect = 0.0 Identities = 369/371 (99%), Gaps = 2/371 (0%) Strand = Plus / Minus Query: 61528 actccctgaagacagtcttggcaccctcaaggagccccagatgccagggaagccttccta 61587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 actccctgaagacagtcttggcaccctcaaggagccccagatgccagggaagccttccta 312 Query: 61588 ccagggggcctttcaaatgtccaggagtacctgctcatgtctcctcaaactcccagcttc 61647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 ccagggggcctttcaaatgtccaggagtacctgctcatgtctcctcaaactcccagcttc 252 Query: 61648 acctgggctggatgagcaaactgtgagatgaggatcccacccgcccctgcctcccaccac 61707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 acctgggctggatgagcaaactgtgagatgaggatcccacccgcccctgcctcccaccac 192 Query: 61708 catcaggcaaatgaccctgattcaagccttggtcaacctccacctgcccactgcccacct 61767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 catcaggcaaatgaccctgattcaagccttggtcaacctccacctgcccactgcccacct 132 Query: 61768 gg-acagccactggctgcagtttcaggaagctgcctcttcccctcaccctccccacggcc 61826 || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 gggaca-ccactggctgcagtttcaggaagctgcctcttcccctcaccctccccacggcc 73 Query: 61827 caggaatcaatgcaatcccctaaaagctcataacttggaggtaattataagaagcatcaa 61886 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72 caggaatcaatgcaatcccctaaaagctcataacttggaggtaattataagaagcatcaa 13 Query: 61887 ttacccagcaa 61897 ||||||||||| Sbjct: 12 ttacccagcaa 2
>gi|1994024|gb|AA341605.1| EST47193 Fetal kidney II Homo sapiens cDNA 5' end, mRNA sequence. Length = 291 Score = 525 bits (273), Expect = e-144 Identities = 278/281 (98%) Strand = Plus / Minus Query: 120156 caattagaaactccttgcttctctttcactgaaatccatcagtctcctgaaggacccagt 120215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 291 caattagaaactccttgcttctctttcactgaaatccatcagtctcctgaaggaccnagt 232 Query: 120216 cgtccctattggagccacacaacaaatccactctgcctttttctgcaccatccagcctgt 120275 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtccctattggagccacacaataaatccactctgcctttttctgcaccatccagcctgt 172 Query: 120276 gttcggaggcagctctgtctcttcccaaccaagggccttccttcacccgttcctcagaag 120335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gttcggaggcagctctgtctcttcccaaccaagggccttccttcacccgttcctcagaag 112 Query: 120336 ccatgcttgcgagttcctttctctgtctgctcatgtccttcagagctcagcacaaacctg 120395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111 ccatgcttgcgagttcctttctctgtctgctcatgtccttcagagctcagcacaaacctg 52 Query: 120396 ggttttgaccatgtgtcaggcagtgtgctcagtgcacggcc 120436 |||||||||||||||||||||||||||||||| |||||||| Sbjct: 51 ggttttgaccatgtgtcaggcagtgtgctcagcgcacggcc 11
>gi|27825730|emb|BX093419.1| BX093419 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998K141785 ; IMAGE:727813, mRNA sequence. Length = 597 Score = 446 bits (232), Expect = e-120 Identities = 236/238 (99%) Strand = Plus / Plus Query: 69419 tgcaggttcatccctagaagattgtggtatttctggccatacgcaggaaaggtgccacag 69478 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 tgcaggatcgtccctagaagattgtggtatttctggccatacgcaggaaaggtgccacag 327 Query: 69479 atgctcaagtataggcatcagctaccaccccatctgctggtggtgctcatacttctccgg 69538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 atgctcaagtataggcatcagctaccaccccatctgctggtggtgctcatacttctccgg 387 Query: 69539 gatacctcccctccagtctcctccacccctacagggtcagcactgctcttaagccttgaa 69598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 gatacctcccctccagtctcctccacccctacagggtcagcactgctcttaagccttgaa 447 Query: 69599 gtgtcacatctgcatggcagctgccagcaaaagggagaaaaatctctgtatcccttca 69656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 gtgtcacatctgcatggcagctgccagcaaaagggagaaaaatctctgtatcccttca 505
Score = 306 bits (159), Expect = 2e-78 Identities = 159/159 (100%) Strand = Plus / Plus Query: 64378 agatgcatatactggagctcagaggatttcagtgagttaccccggccacagccagtgagc 64437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 agatgcatatactggagctcagaggatttcagtgagttaccccggccacagccagtgagc 174 Query: 64438 agcgatgtcaagatgtcttgaatcctgggcctcagctgcaaagccgtaaccagtcctctg 64497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 agcgatgtcaagatgtcttgaatcctgggcctcagctgcaaagccgtaaccagtcctctg 234 Query: 64498 tgttcccatgggccagtgctttacaaaggtccttgcagg 64536 ||||||||||||||||||||||||||||||||||||||| Sbjct: 235 tgttcccatgggccagtgctttacaaaggtccttgcagg 273
Score = 223 bits (116), Expect = 2e-53 Identities = 116/116 (100%) Strand = Plus / Plus Query: 50904 cccagtgccctcttctaagctctttatcatcataatttctgatgtaaagagcatgatgcc 50963 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cccagtgccctcttctaagctctttatcatcataatttctgatgtaaagagcatgatgcc 60 Query: 50964 atggacaaaatgggccctcagtgactatccgatgcagggccaggcactgaatgcag 51019 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atggacaaaatgggccctcagtgactatccgatgcagggccaggcactgaatgcag 116
>gi|27880001|emb|BX115202.1| BX115202 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998F084003 ; IMAGE:1579399, mRNA sequence. Length = 401 Score = 304 bits (158), Expect = 9e-78 Identities = 158/158 (100%) Strand = Plus / Plus Query: 64378 agatgcatatactggagctcagaggatttcagtgagttaccccggccacagccagtgagc 64437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 agatgcatatactggagctcagaggatttcagtgagttaccccggccacagccagtgagc 116 Query: 64438 agcgatgtcaagatgtcttgaatcctgggcctcagctgcaaagccgtaaccagtcctctg 64497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117 agcgatgtcaagatgtcttgaatcctgggcctcagctgcaaagccgtaaccagtcctctg 176 Query: 64498 tgttcccatgggccagtgctttacaaaggtccttgcag 64535 |||||||||||||||||||||||||||||||||||||| Sbjct: 177 tgttcccatgggccagtgctttacaaaggtccttgcag 214
Score = 112 bits (58), Expect = 7e-20 Identities = 58/58 (100%) Strand = Plus / Plus Query: 50962 ccatggacaaaatgggccctcagtgactatccgatgcagggccaggcactgaatgcag 51019 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ccatggacaaaatgggccctcagtgactatccgatgcagggccaggcactgaatgcag 58
>gi|3145227|gb|AA972463.1| op41d04.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1579399 3', mRNA sequence. Length = 378 Score = 296 bits (154), Expect = 2e-75 Identities = 157/158 (99%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 64378 agatgcatatactggagctcagaggatttcagtgagttaccccggccacagccagtgagc 64437 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 332 agatgcatatactggagctcagaggatttcagtgagttacccc-gccacagccagtgagc 274 Query: 64438 agcgatgtcaagatgtcttgaatcctgggcctcagctgcaaagccgtaaccagtcctctg 64497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 agcgatgtcaagatgtcttgaatcctgggcctcagctgcaaagccgtaaccagtcctctg 214 Query: 64498 tgttcccatgggccagtgctttacaaaggtccttgcag 64535 |||||||||||||||||||||||||||||||||||||| Sbjct: 213 tgttcccatgggccagtgctttacaaaggtccttgcag 176
Score = 93.0 bits (48), Expect = 4e-14 Identities = 48/48 (100%) Strand = Plus / Minus Query: 50972 aatgggccctcagtgactatccgatgcagggccaggcactgaatgcag 51019 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 aatgggccctcagtgactatccgatgcagggccaggcactgaatgcag 331
>gi|2054669|gb|AA400790.1| zt71f07.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:727813 3', mRNA sequence. Length = 229 Score = 277 bits (144), Expect = 1e-69 Identities = 152/155 (98%), Gaps = 3/155 (1%) Strand = Plus / Minus Query: 69502 accaccccatctgctggtggtgctcatacttctccgggatacctcccctccagtctcctc 69561 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 229 accaccccatctgctggtggtgctcatacttctcc-ggatacctcccctccagtctcctc 171 Query: 69562 cacccctacagggtcagcactgctcttaagccttgaagtgtcacatctgcatggcagctg 69621 || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 170 ca-ccctacagggtcagcactgctcttaagccttgaagtgtcacatctgcat-gcagctg 113 Query: 69622 ccagcaaaagggagaaaaatctctgtatcccttca 69656 ||||||||||||||||||||||||||||||||||| Sbjct: 112 ccagcaaaagggagaaaaatctctgtatcccttca 78
>gi|3244711|gb|AI027195.1| ov83a07.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1643892 3', mRNA sequence. Length = 451 Score = 206 bits (107), Expect = 3e-48 Identities = 107/107 (100%) Strand = Plus / Plus Query: 125550 ctaatacaccttaccatcatccattccgcaaactgctgctataagtcaccttgcaccccc 125609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 ctaatacaccttaccatcatccattccgcaaactgctgctataagtcaccttgcaccccc 404 Query: 125610 ggacctgtcagaactcccagctgcataccatgtatgccccaaaccct 125656 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 ggacctgtcagaactcccagctgcataccatgtatgccccaaaccct 451
Database: GenBank Human EST entries Posted date: Mar 14, 2005 5:51 PM Number of letters in database: 1,696,141,359 Number of sequences in database: 3,672,294 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.33 0.621 1.12 Matrix: blastn matrix:1 -2 Gap Penalties: Existence: 0, Extension: 0 Number of Hits to DB: 16,816,449 Number of Sequences: 21567308 Number of extensions: 12 Number of successful extensions: 12 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 0 length of query: 276,884 length of database: 3,232,547,564 effective HSP length: 29 effective length of query: 138,412 effective length of database: 3,057,008,157 effective search space: 423126613026684 effective search space used: 0 S2: 24 (46.8 bits)
