BLASTP 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1111089025-15265-61471905361.BLASTQ4 Query= Apo__5|geneid_v1.2_predicted_protein_5|402_AA (401 letters) Database: Non-redundant SwissProt sequences 164,271 sequences; 60,490,055 total letters Score E Sequences producing significant alignments: (bits) Value gi|6137318|sp|O75312|ZPR1_HUMAN Zinc-finger protein ZPR1 (Zinc f... 776 0.0 gi|24636263|sp|Q9BY43|SHA2_HUMAN SNF7 homolog associated with Al... 32 0.38 gi|14194461|sp|Q99996|AKAP9_HUMAN A-kinase anchor protein 9 (Pro... 29 3.2 gi|20454926|sp|Q96RT8|GCP5_HUMAN Gamma-tubulin complex component... 28 4.2 gi|48475012|sp|Q9UHD9|UBQ2_HUMAN Ubiquilin 2 (Protein linking IA... 28 4.2 gi|38372816|sp|Q8NH60|O52J3_HUMAN Olfactory receptor 52J3 28 7.2 gi|17369320|sp|Q9NRC6|SPCR_HUMAN Spectrin beta chain, brain 4 (S... 28 7.2 ALIGNMENTS >gi|6137318|sp|O75312|ZPR1_HUMAN Zinc-finger protein ZPR1 (Zinc finger protein 259) Length = 459 Score = 776 bits (2004), Expect = 0.0 Identities = 390/401 (97%), Positives = 390/401 (97%) Query: 1 MTRLLLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRIQDQGVRYTLSVRALEDMNREVV 60 MTRLLLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRIQDQGVRYTLSVRALEDMNREVV Sbjct: 59 MTRLLLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRIQDQGVRYTLSVRALEDMNREVV 118 Query: 61 KTDSAATRIPELDFEIPAFSQKGALTTVEGLITRAISGLEQDQPARRANKDATAERIDEF 120 KTDSAATRIPELDFEIPAFSQKGALTTVEGLITRAISGLEQDQPARRANKDATAERIDEF Sbjct: 119 KTDSAATRIPELDFEIPAFSQKGALTTVEGLITRAISGLEQDQPARRANKDATAERIDEF 178 Query: 121 IVKLKELKQVASPFTLIIDDPSGNSFVENPHAPQKDDALVITHYNRTRQQEEMLGLQXXX 180 IVKLKELKQVASPFTLIIDDPSGNSFVENPHAPQKDDALVITHYNRTRQQEEMLGLQ Sbjct: 179 IVKLKELKQVASPFTLIIDDPSGNSFVENPHAPQKDDALVITHYNRTRQQEEMLGLQEEA 238 Query: 181 XXXXXXXXDLRNEVLQFSTNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHRTNEV 240 DLRNEVLQFSTNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHRTNEV Sbjct: 239 PAEKPEEEDLRNEVLQFSTNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHRTNEV 298 Query: 241 KSGGAVEPLGTRITLHITDASDMTRDLLKSETCSVEIPELEFELGMAVLGGKFTTLEGLL 300 KSGGAVEPLGTRITLHITDASDMTRDLLKSETCSVEIPELEFELGMAVLGGKFTTLEGLL Sbjct: 299 KSGGAVEPLGTRITLHITDASDMTRDLLKSETCSVEIPELEFELGMAVLGGKFTTLEGLL 358 Query: 301 KDIRELVTKNPFTLGDSSNPGQTERLQEFSQKMDQIIEGNMKAHFIMDDPAGNSYLQNVY 360 KDIRELVTKNPFTLGDSSNPGQTERLQEFSQKMDQIIEGNMKAHFIMDDPAGNSYLQNVY Sbjct: 359 KDIRELVTKNPFTLGDSSNPGQTERLQEFSQKMDQIIEGNMKAHFIMDDPAGNSYLQNVY 418 Query: 361 APEDDPEMKVERYKRTFDQNEELGLNDMKTEGYEAGLAPQR 401 APEDDPEMKVERYKRTFDQNEELGLNDMKTEGYEAGLAPQR Sbjct: 419 APEDDPEMKVERYKRTFDQNEELGLNDMKTEGYEAGLAPQR 459 Score = 124 bits (312), Expect = 4e-29 Identities = 64/200 (32%), Positives = 109/200 (54%), Gaps = 3/200 (1%) Query: 189 DLRNEVLQFSTNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHRTNEVKSGGAVEP 248 D + + + C C T + L +IP F+E+I+ + +CE+CG E++S G ++ Sbjct: 39 DEEQQPTEIESLCMNCYCNGMTRLLLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRIQD 98 Query: 249 LGTRITLHITDASDMTRDLLKSETCSVEIPELEFELGMAVLGGKFTTLEGLL-KDIRELV 307 G R TL + DM R+++K+++ + IPEL+FE+ G TT+EGL+ + I L Sbjct: 99 QGVRYTLSVRALEDMNREVVKTDSAATRIPELDFEIPAFSQKGALTTVEGLITRAISGLE 158 Query: 308 TKNPFTLGDSSNPGQTERLQEFSQKMDQIIEGNMKAHFIMDDPAGNSYLQNVYAPEDDPE 367 P ++ ER+ EF K+ ++ + I+DDP+GNS+++N +AP+ D Sbjct: 159 QDQP--ARRANKDATAERIDEFIVKLKELKQVASPFTLIIDDPSGNSFVENPHAPQKDDA 216 Query: 368 MKVERYKRTFDQNEELGLND 387 + + Y RT Q E LGL + Sbjct: 217 LVITHYNRTRQQEEMLGLQE 236 >gi|24636263|sp|Q9BY43|SHA2_HUMAN SNF7 homolog associated with Alix 2 (HSPC134) (CDA04) (SNF7-1) (Chromatin-modifying protein) (Charged multivesicular body protein 4a) (CHMP4a) Length = 222 Score = 32.0 bits (71), Expect = 0.38 Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 10/114 (8%) Query: 31 EIQSAGRIQDQGVRYTL-SVRALEDMNREVVKTDSAATRIPELDFEIPAFSQKGALTTVE 89 E+Q+A + + R L ++R + +++ +TD + L+F+ A + A T E Sbjct: 47 ELQTAKKYGTKNKRAALQALRRKKRFEQQLAQTDGT---LSTLEFQREAI--ENATTNAE 101 Query: 90 GLITRAISGLEQDQPARRANKDATAERIDEFIVKLKELKQVASPFTLIIDDPSG 143 L T ++ Q ++A +D +++DE + + E ++VA + I P G Sbjct: 102 VLRTMELAA----QSMKKAYQDMDIDKVDELMTDITEQQEVAQQISDAISRPMG 151 >gi|14194461|sp|Q99996|AKAP9_HUMAN A-kinase anchor protein 9 (Protein kinase A anchoring protein 9) (PRKA9) (A-kinase anchor protein 450 kDa) (AKAP 450) (A-kinase anchor protein 350 kDa) (AKAP 350) (hgAKAP 350) (AKAP 120 like protein) (Hyperion protein) (Yotiao protein) (Centrosome- and Golgi-localized PKN-associated protein) (CG-NAP) Length = 3911 Score = 28.9 bits (63), Expect = 3.2 Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 6/92 (6%) Query: 300 LKDIRELVTKNPFTLGDSSNPGQTERLQEFSQKMDQIIEGNMKAHFIMDDPAGNSYLQNV 359 +++ REL+++ + + P + + LQE + M + +E +A + DD + V Sbjct: 1981 IQEERELLSRQKEAMKAEAGPVEQQLLQETEKLMKEKLEVQCQAEKVRDD-----LQKQV 2035 Query: 360 YAPEDDPEMKVERYKRTFDQNEELGLNDMKTE 391 A E D E +V R+ +Q + L D++ + Sbjct: 2036 KALEIDVEEQVSRFIE-LEQEKNTELMDLRQQ 2066 >gi|20454926|sp|Q96RT8|GCP5_HUMAN Gamma-tubulin complex component 5 (GCP-5) Length = 1024 Score = 28.5 bits (62), Expect = 4.2 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 10/79 (12%) Query: 87 TVEGLITRAISGLEQDQPARRANKDATAERIDEFIVKLKELK-----QVASPFTLIIDDP 141 T+EG+ + + + D + K T E ++ + +KE+K + S + D P Sbjct: 64 TIEGIYEKFV--IHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDSP 121 Query: 142 SGNSFVENP---HAPQKDD 157 S +S+VE P +KDD Sbjct: 122 SNSSYVETPRNKEVEKKDD 140 >gi|48475012|sp|Q9UHD9|UBQ2_HUMAN Ubiquilin 2 (Protein linking IAP with cytoskeleton-2) (PLIC-2) (hPLIC-2) (Ubiquitin-like product Chap1/Dsk2) (DSK2 homolog) (Chap1) (HRIHFB2157) Length = 624 Score = 28.5 bits (62), Expect = 4.2 Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 10/91 (10%) Query: 307 VTKNPFTLGDSSNPGQTERLQEFSQKMDQIIEGNMKAHFIMDDPAGNSYLQNVYAPEDDP 366 + +NPF SNP +L + +M Q+I+ N + ++++P ++ +P Sbjct: 185 IMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNP---DIMRQTLEIARNP 241 Query: 367 EMKVERYKRTFDQNEELGLNDMKT--EGYEA 395 M E + N++L L+++++ GY A Sbjct: 242 AMMQEMMR-----NQDLALSNLESIPGGYNA 267 >gi|38372816|sp|Q8NH60|O52J3_HUMAN Olfactory receptor 52J3 Length = 311 Score = 27.7 bits (60), Expect = 7.2 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%) Query: 5 LLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRIQDQGVRYTLSVRALEDMNREVVKTD- 63 L+ ++PF + I++ CEH G S G I+ G+ Y L V + +N ++ Sbjct: 164 LIYRLPFCQAHIIAHSYCEHMGIAKL---SCGNIRINGI-YGLFVVSFFVLNLVLIGISY 219 Query: 64 ----SAATRIPELDFEIPAFSQKGA 84 A R+P D ++ A S GA Sbjct: 220 VYILRAVFRLPSHDAQLKALSTCGA 244 >gi|17369320|sp|Q9NRC6|SPCR_HUMAN Spectrin beta chain, brain 4 (Spectrin, non-erythroid beta chain 4) (Beta-V spectrin) (BSPECV) Length = 3674 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 6/49 (12%) Query: 289 LGGKFTTLEGLLKDIRELVTKNPFTLGDSSNPGQTERLQEFSQKMDQII 337 L G+ TL+GLLK ++E V + + +T+ Q F Q+ Q++ Sbjct: 1073 LQGQVETLQGLLKQVQEQVAQR------ARRQAETQARQSFLQESQQLL 1115 Database: Non-redundant SwissProt sequences Posted date: Mar 15, 2005 10:11 AM Number of letters in database: 60,490,055 Number of sequences in database: 164,271 Lambda K H 0.316 0.133 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 869,424 Number of Sequences: 164271 Number of extensions: 37267 Number of successful extensions: 89 Number of sequences better than 10.0: 0 Number of HSP's better than 10.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89 Number of HSP's gapped (non-prelim): 0 length of query: 401 length of database: 6,424,444 effective HSP length: 98 effective length of query: 303 effective length of database: 5,257,754 effective search space: 1593099462 effective search space used: 1593099462 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 59 (27.3 bits)