>gi|27469566|gb|AAH42075.1|COL22A1 protein [Homo sapiens] Length = 854 Score = 37.7 bits (86), Expect = 0.084 Identities = 51/192 (26%), Positives = 67/192 (34%), Gaps = 48/192 (25%) Query: 408 PG-EGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAFGKKLWAIAPKGPGLAGVPHSMPRC 466 PG EGLP K G + GP+ P K +P PG +G P Sbjct: 527 PGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPG--------SPGEPGPSGTPGQ---- 574 Query: 467 VQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSL 526 +G + E GLP F P E G+ K+ K + G + + P Sbjct: 575 -KGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEG----VPGKPGEPGFKGERGDPGIK 629 Query: 527 PCLGPPSLEGEKHGPGLPSSGHEANCTRHLHT----------------------HPGQPG 564 GPP +G+ PG+P GH+ HT PG PG Sbjct: 630 GDKGPPGGKGQPGDPGIP--GHKG------HTGLMGPQGLPGENGPVGPPGPPGQPGFPG 681 Query: 565 ARGLSPRPECIR 576 RG SP E +R Sbjct: 682 LRGESPSMETLR 693
>gi|40805823|ref|NP_690848.1|collagen, type XXII, alpha 1 [Homo sapiens] Length = 1626 Score = 37.7 bits (86), Expect = 0.084 Identities = 51/192 (26%), Positives = 67/192 (34%), Gaps = 48/192 (25%) Query: 408 PG-EGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAFGKKLWAIAPKGPGLAGVPHSMPRC 466 PG EGLP K G + GP+ P K +P PG +G P Sbjct: 1299 PGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPG--------SPGEPGPSGTPGQ---- 1346 Query: 467 VQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSL 526 +G + E GLP F P E G+ K+ K + G + + P Sbjct: 1347 -KGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEG----VPGKPGEPGFKGERGDPGIK 1401 Query: 527 PCLGPPSLEGEKHGPGLPSSGHEANCTRHLHT----------------------HPGQPG 564 GPP +G+ PG+P GH+ HT PG PG Sbjct: 1402 GDKGPPGGKGQPGDPGIP--GHKG------HTGLMGPQGLPGENGPVGPPGPPGQPGFPG 1453 Query: 565 ARGLSPRPECIR 576 RG SP E +R Sbjct: 1454 LRGESPSMETLR 1465
>gi|22652113|gb|AAN03620.1|alpha 1 type XXII collagen [Homo sapiens] Length = 1626 Score = 37.7 bits (86), Expect = 0.084 Identities = 51/192 (26%), Positives = 67/192 (34%), Gaps = 48/192 (25%) Query: 408 PG-EGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAFGKKLWAIAPKGPGLAGVPHSMPRC 466 PG EGLP K G + GP+ P K +P PG +G P Sbjct: 1299 PGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPG--------SPGEPGPSGTPGQ---- 1346 Query: 467 VQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSL 526 +G + E GLP F P E G+ K+ K + G + + P Sbjct: 1347 -KGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEG----VPGKPGEPGFKGERGDPGIK 1401 Query: 527 PCLGPPSLEGEKHGPGLPSSGHEANCTRHLHT----------------------HPGQPG 564 GPP +G+ PG+P GH+ HT PG PG Sbjct: 1402 GDKGPPGGKGQPGDPGIP--GHKG------HTGLMGPQGLPGENGPVGPPGPPGQPGFPG 1453 Query: 565 ARGLSPRPECIR 576 RG SP E +R Sbjct: 1454 LRGESPSMETLR 1465
>gi|44917610|ref|NP_065933.1|collagen-like protein [Homo sapiens] gi|45946128|gb|AAH43183.1|
Collagen-like protein [Homo sapiens] Length = 1284 Score = 37.0 bits (84), Expect = 0.14 Identities = 41/125 (32%), Positives = 53/125 (42%), Gaps = 21/125 (16%) Query: 521 PAPRSLPCLGPPSLEGEKHGPGLPS-SGHEANCTRHLHTHPGQPGARGLSPRPECIRIFR 579 P PR GPP ++GEK GLP GH H G PG GL P+ +R Sbjct: 1095 PGPR-----GPPGVKGEKGDHGLPGLQGHPG--------HQGIPGRVGLQ-GPKGMRGLE 1140 Query: 580 LSGAIPTAPFIFLSRGLVNMEPASGEVGM-----CWGRHSRKLEAGGKRKEKQLQELAEL 634 + +P P +G+ SGE G G K E G K +++ L L +L Sbjct: 1141 GTAGLPGPPGPRGFQGMAGARGTSGERGPPGTVGPTGLPGPKGERGEKGEQQSLATLYQL 1200 Query: 635 VRSQA 639 V SQA Sbjct: 1201 V-SQA 1204
>gi|420027|pir||S32436 collagen alpha 2(IX) chain - human (fragment) Length = 618 Score = 36.2 bits (82), Expect = 0.24 Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 18/65 (27%) Query: 518 HQHPAPRSLPCL----------GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 H HP PR +P + GP GEK PG GH PG PG G Sbjct: 524 HGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVGRGHPG--------MPGPPGIPG 575 Query: 568 LSPRP 572 L RP Sbjct: 576 LPGRP 580
>gi|1360743|pir||A57131 collagen alpha 2(VIII) chain - human (fragment) gi|177179|gb|AAA62822.1|alpha-2 type VIII collagen Length = 635 Score = 36.2 bits (82), Expect = 0.24 Identities = 34/124 (27%), Positives = 47/124 (37%), Gaps = 12/124 (9%) Query: 529 LGPPSLEGEKHGPGLPSSGHEANC----TRHLHTHPGQPGARGLSPRPECIRIFRLSGAI 584 +GP L G K PGLP E T PG PG+ G++ P L G Sbjct: 409 IGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPRGPPGVPGSPGITGPP------GLPGP- 461 Query: 585 PTAPFIFLSRGLVNME-PASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANS 643 P AP F G+ + P G G G+ + G+ ++ S PA+ Sbjct: 462 PGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPLPASG 521 Query: 644 APIK 647 P+K Sbjct: 522 MPVK 525
>gi|7263974|emb|CAB81611.1|collagen, type IX, alpha 2 [Homo sapiens] gi|11386161|ref|NP_001843.1|
alpha 2 type IX collagen [Homo sapiens] gi|3510460|gb|AAC33512.1|
collagen type IX alpha 2 chain [Homo sapiens] gi|20137328|sp|Q14055|CA29_HUMAN
Collagen alpha 2(IX) chain precursor Length = 689 Score = 36.2 bits (82), Expect = 0.24 Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 18/65 (27%) Query: 518 HQHPAPRSLPCL----------GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 H HP PR +P + GP GEK PG GH PG PG G Sbjct: 573 HGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVGRGHPG--------MPGPPGIPG 624 Query: 568 LSPRP 572 L RP Sbjct: 625 LPGRP 629
>gi|7573532|emb|CAB87590.1|collagen, type X, alpha 1(Schmid metaphyseal chondrodysplasia) [Homo sapiens] gi|18105032|ref|NP_000484.2|
collagen, type X, alpha 1 precursor [Homo sapiens] gi|1360679|pir||CGHU1D collagen alpha 1(X) chain precursor - human gi|1405723|emb|CAA67178.1|
type X collagen [Homo sapiens] gi|2506306|sp|Q03692|CA1A_HUMAN
Collagen alpha 1(X) chain precursor gi|4225951|emb|CAA51170.1|
collagen X [Homo sapiens] Length = 680 Score = 36.2 bits (82), Expect = 0.24 Identities = 37/109 (33%), Positives = 46/109 (42%), Gaps = 14/109 (12%) Query: 461 HSMPRCVQGGRAETKEVGLPDFQRFFIPNLELKSSGIN-RKQNRHPHSQHKERQRGHQHQ 519 + MP ++G TK +FFIP +KS GI R + P RGH Sbjct: 25 YQMPTGIKGPLPNTKT-------QFFIP-YTIKSKGIAVRGEQGTPGPPGPAGPRGHPGP 76 Query: 520 HPAPRSLPCLGPPSLEGEKHGPGLPS-SGHEANCTRHLHTHPGQPGARG 567 P P G P L+GE PGLP G A + PG+PG RG Sbjct: 77 S-GPPGKPGYGSPGLQGE---PGLPGPPGPSAVGKPGVPGLPGKPGERG 121
Score = 34.3 bits (77), Expect = 0.92 Identities = 46/168 (27%), Positives = 58/168 (34%), Gaps = 42/168 (25%) Query: 407 EPGEGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAFGKKLWAIAPKGP-GLAGVPHSMPR 465 +PG G P + GL GP P P G++ PKG G AG+P Sbjct: 82 KPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGER-GPYGPKGDVGPAGLP----- 135 Query: 466 CVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRS 525 G R G+P +P K Q+G P Sbjct: 136 ---GPRGPPGPPGIPGPAGISVPG--------------------KPGQQG-------PTG 165 Query: 526 LPCLGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPE 573 P GP GEK PG+P G + PG+PG RGL P P+ Sbjct: 166 AP--GPRGFPGEKGAPGVP--GMNGQKGEMGYGAPGRPGERGL-PGPQ 208
>gi|56203493|emb|CAI19530.1|collagen, type X, alpha 1(Schmid metaphyseal chondrodysplasia) [Homo sapiens] Length = 128 Score = 36.2 bits (82), Expect = 0.24 Identities = 37/109 (33%), Positives = 46/109 (42%), Gaps = 14/109 (12%) Query: 461 HSMPRCVQGGRAETKEVGLPDFQRFFIPNLELKSSGIN-RKQNRHPHSQHKERQRGHQHQ 519 + MP ++G TK +FFIP +KS GI R + P RGH Sbjct: 25 YQMPTGIKGPLPNTKT-------QFFIP-YTIKSKGIAVRGEQGTPGPPGPAGPRGHPGP 76 Query: 520 HPAPRSLPCLGPPSLEGEKHGPGLPS-SGHEANCTRHLHTHPGQPGARG 567 P P G P L+GE PGLP G A + PG+PG RG Sbjct: 77 S-GPPGKPGYGSPGLQGE---PGLPGPPGPSAVGKPGVPGLPGKPGERG 121
>gi|18201915|ref|NP_542410.1|collagen, type XI, alpha 2 isoform 3 preproprotein [Homo sapiens] Length = 1629 Score = 36.2 bits (82), Expect = 0.24 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 10/87 (11%) Query: 490 LELKSSGINRKQNRHPH----SQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPS 545 LE + R QN+ PH S ++ R H+ Q+ P+S GP L+GEK P + Sbjct: 226 LECEGGQRERPQNQQPHRAQRSPQQQPSRLHRPQNQEPQSQAAHGPRGLKGEKGEPAVLE 285 Query: 546 SGHEANCTRHLHTHPGQPGARGLSPRP 572 G + PG G GL P Sbjct: 286 PG------MLVEGPPGPEGPAGLIGPP 306
>gi|1000747|gb|AAC50215.1|Pro-a2(XI) Length = 1629 Score = 36.2 bits (82), Expect = 0.24 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 10/87 (11%) Query: 490 LELKSSGINRKQNRHPH----SQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPS 545 LE + R QN+ PH S ++ R H+ Q+ P+S GP L+GEK P + Sbjct: 226 LECEGGQRERPQNQQPHRAQRSPQQQPSRLHRPQNQEPQSQAAHGPRGLKGEKGEPAVLE 285 Query: 546 SGHEANCTRHLHTHPGQPGARGLSPRP 572 G + PG G GL P Sbjct: 286 PG------MLVEGPPGPEGPAGLIGPP 306
>gi|1054873|gb|AAA80977.1|alpha-2 IX collagen Length = 675 Score = 36.2 bits (82), Expect = 0.24 Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 18/65 (27%) Query: 518 HQHPAPRSLPCL----------GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 H HP PR +P + GP GEK PG GH PG PG G Sbjct: 559 HGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVGRGHPG--------MPGPPGIPG 610 Query: 568 LSPRP 572 L RP Sbjct: 611 LPGRP 615
>gi|446631|prf||1912189A collagen:SUBUNIT=alpha2:ISOTYPE=IX Length = 618 Score = 36.2 bits (82), Expect = 0.24 Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 18/65 (27%) Query: 518 HQHPAPRSLPCL----------GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 H HP PR +P + GP GEK PG GH PG PG G Sbjct: 524 HGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVGRGHPG--------MPGPPGIPG 575 Query: 568 LSPRP 572 L RP Sbjct: 576 LPGRP 580
>gi|15489090|gb|AAH13658.1|Unknown (protein for IMAGE:4153348) [Homo sapiens] Length = 278 Score = 35.8 bits (81), Expect = 0.32 Identities = 41/125 (32%), Positives = 52/125 (41%), Gaps = 21/125 (16%) Query: 521 PAPRSLPCLGPPSLEGEKHGPGLPS-SGHEANCTRHLHTHPGQPGARGLSPRPECIRIFR 579 P PR GPP ++GEK GLP GH H G PG GL P+ +R Sbjct: 83 PGPR-----GPPGVKGEKGDHGLPGLQGHPG--------HQGIPGRVGLQ-GPKGMRGLE 128 Query: 580 LSGAIPTAPFIFLSRGLVNMEPASGEVGM-----CWGRHSRKLEAGGKRKEKQLQELAEL 634 + +P P +G+ SGE G G K E G K + + L L +L Sbjct: 129 GTAGLPGPPGPRGFQGMAGARGTSGERGPPGTVGPTGLPGPKGERGEKGEPQSLATLYQL 188 Query: 635 VRSQA 639 V SQA Sbjct: 189 V-SQA 192
>gi|7959281|dbj|BAA96034.1|KIAA1510 protein [Homo sapiens] Length = 1140 Score = 35.8 bits (81), Expect = 0.32 Identities = 41/125 (32%), Positives = 52/125 (41%), Gaps = 21/125 (16%) Query: 521 PAPRSLPCLGPPSLEGEKHGPGLPS-SGHEANCTRHLHTHPGQPGARGLSPRPECIRIFR 579 P PR GPP ++GEK GLP GH H G PG GL P+ +R Sbjct: 945 PGPR-----GPPGVKGEKGDHGLPGLQGHPG--------HQGIPGRVGLQ-GPKGMRGLE 990 Query: 580 LSGAIPTAPFIFLSRGLVNMEPASGEVGM-----CWGRHSRKLEAGGKRKEKQLQELAEL 634 + +P P +G+ SGE G G K E G K + + L L +L Sbjct: 991 GTAGLPGPPGPRGFQGMAGARGTSGERGPPGTVGPTGLPGPKGERGEKGEPQSLATLYQL 1050 Query: 635 VRSQA 639 V SQA Sbjct: 1051 V-SQA 1054
>gi|2911247|gb|AAC04277.1|PNS specific microtubule-associated protein tau, adult isoform [Homo sapiens] gi|8400713|ref|NP_058519.1|
microtubule-associated protein tau isoform 1 [Homo sapiens] gi|13124806|sp|P10636|TAU_HUMAN
Microtubule-associated protein tau (Neurofibrillary tangle protein) (Paired helical filament-tau) (PHF-tau) Length = 758 Score = 35.0 bits (79), Expect = 0.54 Identities = 45/196 (22%), Positives = 68/196 (34%), Gaps = 32/196 (16%) Query: 384 QGQALNAGPQVLQLPILRCYSVSEPGEGLPSKLWQGGLSIKCGPRC-QSSPAAKETPYAF 442 Q A G V ++P L+ VS+ +G S + S + + ++ P Sbjct: 358 QPAAAPRGKPVSRVPQLKARMVSKSKDGTGSDDKKAKTSTRSSAKTLKNRPCLSPKLPTP 417 Query: 443 GKKLWAIAPKGPGLAGVPHSMPRCVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQN 502 G I P P + P S P+ V + T G E+K G + K Sbjct: 418 GSSDPLIQPSSPAVCPEPPSSPKHVSSVTSRTGSSGAK----------EMKLKGADGKTK 467 Query: 503 -RHPHSQHKERQRGHQHQH-------PAPRSLPCLGPPSLEGEKHGPGLPSSGHEANCTR 554 P Q+G + PAP++ P G P G++ G P S Sbjct: 468 IATPRGAAPPGQKGQANATRIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGS-------- 519 Query: 555 HLHTHPGQPGARGLSP 570 PG PG+R +P Sbjct: 520 -----PGTPGSRSRTP 530
>gi|23821813|sp|Q9P218|KF10_HUMANProtein KIAA1510 precursor Length = 1329 Score = 35.0 bits (79), Expect = 0.54 Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 16/117 (13%) Query: 529 LGPPSLEGEKHGPGLPS-SGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAIPTA 587 +GPP ++GEK GLP GH H G PG GL P+ +R + +P Sbjct: 1137 VGPPGVKGEKGDHGLPGLQGHPG--------HQGIPGRVGLQ-GPKGMRGLEGTAGLPGP 1187 Query: 588 PFIFLSRGLVNMEPASGEVGM-----CWGRHSRKLEAGGKRKEKQLQELAELVRSQA 639 P +G+ SGE G G K E G K + + L L +LV SQA Sbjct: 1188 PGPRGFQGMAGARGTSGERGPPGTVGPTGLPGPKGERGEKGEPQSLATLYQLV-SQA 1243
>gi|560151|emb|CAA46236.1|alpha1(X)collagen [Homo sapiens] Length = 629 Score = 34.3 bits (77), Expect = 0.92 Identities = 46/168 (27%), Positives = 58/168 (34%), Gaps = 42/168 (25%) Query: 407 EPGEGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAFGKKLWAIAPKGP-GLAGVPHSMPR 465 +PG G P + GL GP P P G++ PKG G AG+P Sbjct: 31 KPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGER-GPYGPKGDVGPAGLP----- 84 Query: 466 CVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRS 525 G R G+P +P K Q+G P Sbjct: 85 ---GPRGPPGPPGIPGPAGISVPG--------------------KPGQQG-------PTG 114 Query: 526 LPCLGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPE 573 P GP GEK PG+P G + PG+PG RGL P P+ Sbjct: 115 AP--GPRGFPGEKGAPGVP--GMNGQKGEMGYGAPGRPGERGL-PGPQ 157
>gi|30095|emb|CAA42933.1|collagen subunit (alpha-1 (X)) 3 [Homo sapiens] Length = 680 Score = 34.3 bits (77), Expect = 0.92 Identities = 46/168 (27%), Positives = 58/168 (34%), Gaps = 42/168 (25%) Query: 407 EPGEGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAFGKKLWAIAPKGP-GLAGVPHSMPR 465 +PG G P + GL GP P P G++ PKG G AG+P Sbjct: 82 KPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGER-GPYGPKGDVGPAGLP----- 135 Query: 466 CVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRS 525 G R G+P +P K Q+G P Sbjct: 136 ---GPRGPPGPPGIPGPAGISVPG--------------------KPGQQG-------PTG 165 Query: 526 LPCLGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPE 573 P GP GEK PG+P G + PG+PG RGL P P+ Sbjct: 166 AP--GPRGFPGEKGAPGVP--GMNGQKGEMGYGAPGRPGERGL-PGPQ 208
Score = 33.9 bits (76), Expect = 1.2 Identities = 32/86 (37%), Positives = 38/86 (44%), Gaps = 7/86 (8%) Query: 484 RFFIPNLELKSSGIN-RKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPG 542 +FFIP +KS GI R + P RGH P P G P L+GE PG Sbjct: 41 QFFIP-YTIKSKGIAVRGEQGTPGPPGPAGPRGHPGPS-GPPGKPGYGSPGLQGE---PG 95 Query: 543 LPS-SGHEANCTRHLHTHPGQPGARG 567 LP G A + PG+PG RG Sbjct: 96 LPGPPGPSAVGKPGVPGLPGKPGERG 121
>gi|22027568|ref|NP_542988.2|alpha 1 type XIII collagen isoform 2 [Homo sapiens] Length = 705 Score = 34.3 bits (77), Expect = 0.92 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 517 QHQHPAPRSLP-CLGPPSLEGEKHGPGLPSSGHEANCT-RHLHTHPGQPGARGLSPRP 572 + + AP++ P C PP+ +G PGLP S +A + PGQPG RG P Sbjct: 105 RRRREAPKTSPGCNCPPAFQGPTGRPGLPGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 162
>gi|22027599|ref|NP_543000.2|alpha 1 type XIII collagen isoform 14 [Homo sapiens] Length = 664 Score = 34.3 bits (77), Expect = 0.92 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 517 QHQHPAPRSLP-CLGPPSLEGEKHGPGLPSSGHEANCT-RHLHTHPGQPGARGLSPRP 572 + + AP++ P C PP+ +G PGLP S +A + PGQPG RG P Sbjct: 105 RRRREAPKTSPGCNCPPAFQGPTGRPGLPGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 162
>gi|20380052|gb|AAH28178.1|COL3A1 protein [Homo sapiens] Length = 1163 Score = 33.9 bits (76), Expect = 1.2 Identities = 50/172 (29%), Positives = 57/172 (33%), Gaps = 27/172 (15%) Query: 410 EGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAF-GKKLWAIAPKGPGLAGVPHSMPRCVQ 468 +G P G+ K GPR + P P G K AP PG+AG PR Sbjct: 743 KGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAG-----PRGSP 797 Query: 469 GGRAETKEVGLPDFQRFFIPNLELKSSGIN----RKQNRHPHSQHKERQRGHQHQHPAPR 524 G R ET G F N E G K P + HP P Sbjct: 798 GERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGKDGTSGHPGPI 857 Query: 525 SLPCLGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGL--SPRPEC 574 P GP GE+ G P HPGQPG G +P P C Sbjct: 858 GPP--GPRGNRGERGSEGSPG-------------HPGQPGPPGPPGAPGPCC 894
>gi|49355790|ref|NP_079410.3|chromodomain helicase DNA binding protein 9 [Homo sapiens] Length = 2898 Score = 33.9 bits (76), Expect = 1.2 Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 22/128 (17%) Query: 593 SRGLVNMEPASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAP-IKRAGS 651 +R L+ EP S + G+ + G ++++ + PA+ P + + GS Sbjct: 2069 TRTLIKSEPVSPKNGVLPQATGDQKSGGKCETDRRMVAARTEPLTPNPASKKPRVHKRGS 2128 Query: 652 REPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVTHAREGSQWES 711 SD +++R S C S R S S +S +H+R GS S Sbjct: 2129 ESSSDSDSDSER---------SSC------------SSRSSSSSSSSSCSHSRSGSSSSS 2167 Query: 712 SSECGKGA 719 SS C + Sbjct: 2168 SSSCSSAS 2175
>gi|34327952|dbj|BAA20767.2|KIAA0308 [Homo sapiens] Length = 2119 Score = 33.9 bits (76), Expect = 1.2 Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 22/128 (17%) Query: 593 SRGLVNMEPASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAP-IKRAGS 651 +R L+ EP S + G+ + G ++++ + PA+ P + + GS Sbjct: 1290 TRTLIKSEPVSPKNGVLPQATGDQKSGGKCETDRRMVAARTEPLTPNPASKKPRVHKRGS 1349 Query: 652 REPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVTHAREGSQWES 711 SD +++R S C S R S S +S +H+R GS S Sbjct: 1350 ESSSDSDSDSER---------SSC------------SSRSSSSSSSSSCSHSRSGSSSSS 1388 Query: 712 SSECGKGA 719 SS C + Sbjct: 1389 SSSCSSAS 1396
>gi|49476336|gb|AAT66509.1|KISH2; hKISH2; Kismet homolog 2 [Homo sapiens] Length = 2881 Score = 33.9 bits (76), Expect = 1.2 Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 22/128 (17%) Query: 593 SRGLVNMEPASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAP-IKRAGS 651 +R L+ EP S + G+ + G ++++ + PA+ P + + GS Sbjct: 2069 ARTLIKSEPGSPKNGVLPQATGDQKSGGKCETDRRMVAARTEPLTPNPASKKPRVHKRGS 2128 Query: 652 REPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVTHAREGSQWES 711 SD +++R S C S R S S +S +H+R GS S Sbjct: 2129 ESSSDSDSDSER---------SSC------------SSRSSSSSSSSSCSHSRSGSSSSS 2167 Query: 712 SSECGKGA 719 SS C + Sbjct: 2168 SSSCSSAS 2175
>gi|56202938|emb|CAI22396.1|collagen, type XXI, alpha 1 [Homo sapiens] gi|56202574|emb|CAI22497.1|
collagen, type XXI, alpha 1 [Homo sapiens] gi|55665070|emb|CAH73912.1|
collagen, type XXI, alpha 1 [Homo sapiens] gi|17974510|gb|AAL50033.1|
alpha 1 chain-like collagen COLA1L precursor [Homo sapiens] Length = 954 Score = 33.5 bits (75), Expect = 1.6 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 17/84 (20%) Query: 527 PCL---GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGA 583 PC+ G P L+G K PGLP +PG PG G +P I G Sbjct: 440 PCICPPGKPGLQGPKGDPGLPG-------------NPGYPGQPGQDGKPGYQGIAGTPG- 485 Query: 584 IPTAPFIFLSRGLVNMEPASGEVG 607 +P +P I +RGL + G G Sbjct: 486 VPGSPGIQGARGLPGYKGEPGRDG 509
>gi|32880177|gb|AAP88919.1|collagen, type VIII, alpha 1 [Homo sapiens] gi|17738302|ref|NP_001841.2|
alpha 1 type VIII collagen precursor [Homo sapiens] gi|32895368|ref|NP_065084.2|
alpha 1 type VIII collagen precursor [Homo sapiens] gi|15488904|gb|AAH13581.1|
Alpha 1 type VIII collagen, precursor [Homo sapiens] gi|21903375|sp|P27658|CA18_HUMAN
Collagen alpha 1(VIII) chain precursor (Endothelial collagen) Length = 744 Score = 33.5 bits (75), Expect = 1.6 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 529 LGPPSLEGEKHGPGLPS----SGHEANCTRHLHTHPGQPGARGLSPRP 572 +GPP + G K PGLP G LH PG+PGA G +P Sbjct: 509 IGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQP 556
>gi|7018423|emb|CAB61360.2|hypothetical protein [Homo sapiens] Length = 701 Score = 33.5 bits (75), Expect = 1.6 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 17/101 (16%) Query: 490 LELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGE------KHGPGL 543 ++L+ + + + N ++ K+++R A P G E E KHGP L Sbjct: 315 IKLRRTNYSLRFNCDQQAEQKKKKRHSSTGDSADAGPPAAGSARGEKEMEGVALKHGPSL 374 Query: 544 PSSGHEANCTRHLH-----------THPGQPGARGLSPRPE 573 P +A TR HPG P A +P PE Sbjct: 375 PQERKQAPSTRRDSAEPSSSRSVPVAHPGPPPASSQTPAPE 415
>gi|56202937|emb|CAI22395.1|OTTHUMP00000040019 [Homo sapiens] gi|56202573|emb|CAI22496.1|
OTTHUMP00000040019 [Homo sapiens] gi|55665071|emb|CAH73913.1|
OTTHUMP00000040019 [Homo sapiens] gi|19310967|gb|AAL86699.1|
alpha 1 type XXI collagen precursor [Homo sapiens] gi|15593270|gb|AAL02227.1|
collagen XXI [Homo sapiens] gi|18780273|ref|NP_110447.2|
alpha 1 type XXI collagen precursor [Homo sapiens] Length = 957 Score = 33.5 bits (75), Expect = 1.6 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 17/84 (20%) Query: 527 PCL---GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGA 583 PC+ G P L+G K PGLP +PG PG G +P I G Sbjct: 443 PCICPPGKPGLQGPKGDPGLPG-------------NPGYPGQPGQDGKPGYQGIAGTPG- 488 Query: 584 IPTAPFIFLSRGLVNMEPASGEVG 607 +P +P I +RGL + G G Sbjct: 489 VPGSPGIQGARGLPGYKGEPGRDG 512
>gi|41146807|ref|XP_044178.4|PREDICTED: KIAA1211 protein [Homo sapiens] Length = 1233 Score = 33.5 bits (75), Expect = 1.6 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 17/101 (16%) Query: 490 LELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGE------KHGPGL 543 ++L+ + + + N ++ K+++R A P G E E KHGP L Sbjct: 847 IKLRRTNYSLRFNCDQQAEQKKKKRHSSTGDSADAGPPAAGSARGEKEMEGVALKHGPSL 906 Query: 544 PSSGHEANCTRHLH-----------THPGQPGARGLSPRPE 573 P +A TR HPG P A +P PE Sbjct: 907 PQERKQAPSTRRDSAEPSSSRSVPVAHPGPPPASSQTPAPE 947
>gi|34532338|dbj|BAC86392.1|unnamed protein product [Homo sapiens] Length = 1233 Score = 33.5 bits (75), Expect = 1.6 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 17/101 (16%) Query: 490 LELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGE------KHGPGL 543 ++L+ + + + N ++ K+++R A P G E E KHGP L Sbjct: 847 IKLRRTNYSLRFNCDQQAEQKKKKRHSSTGDSADAGPPAAGSARGEKEMEGVALKHGPSL 906 Query: 544 PSSGHEANCTRHLH-----------THPGQPGARGLSPRPE 573 P +A TR HPG P A +P PE Sbjct: 907 PQERKQAPSTRRDSAEPSSSRSVPVAHPGPPPASSQTPAPE 947
>gi|22137756|gb|AAH36380.1|KIAA0980 protein [Homo sapiens] Length = 1380 Score = 33.5 bits (75), Expect = 1.6 Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 29/144 (20%) Query: 593 SRGLVNMEPASGEVGMCW-----GRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIK 647 +RGL+ + P GE + W GR S + G R+ +Q Q+ ++A + AP Sbjct: 843 TRGLLPLRPGCGERPLAWLAPGDGRESEEAAGAGPRR-RQAQD------TEATQSPAPAP 895 Query: 648 RAGSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVT---HAR 704 S PS++ Q P + G +V P P S E PG ++ R Sbjct: 896 APASHGPSERWSRMQ-PCGVDG------DIVPKEPEPFGASAAGLEQPGARELPLLGTER 948 Query: 705 EGSQWE-------SSSECGKGAER 721 + SQ + ++ CG AER Sbjct: 949 DASQTQPRMPPLRPAASCGGQAER 972
>gi|12052774|emb|CAB66559.1|hypothetical protein [Homo sapiens] Length = 957 Score = 33.5 bits (75), Expect = 1.6 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 17/84 (20%) Query: 527 PCL---GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGA 583 PC+ G P L+G K PGLP +PG PG G +P I G Sbjct: 443 PCICPPGKPGLQGPKGDPGLPG-------------NPGYPGQPGQDGKPGYQGIAGTPG- 488 Query: 584 IPTAPFIFLSRGLVNMEPASGEVG 607 +P +P I +RGL + G G Sbjct: 489 VPGSPGIQGARGLPGYKGEPGRDG 512
>gi|11359992|pir||T42702 hypothetical protein DKFZp434F117.1 - human (fragment) Length = 834 Score = 33.5 bits (75), Expect = 1.6 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 17/101 (16%) Query: 490 LELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGE------KHGPGL 543 ++L+ + + + N ++ K+++R A P G E E KHGP L Sbjct: 448 IKLRRTNYSLRFNCDQQAEQKKKKRHSSTGDSADAGPPAAGSARGEKEMEGVALKHGPSL 507 Query: 544 PSSGHEANCTRHLH-----------THPGQPGARGLSPRPE 573 P +A TR HPG P A +P PE Sbjct: 508 PQERKQAPSTRRDSAEPSSSRSVPVAHPGPPPASSQTPAPE 548
>gi|105686|pir||S15435 collagen alpha 1(VIII) chain precursor - human gi|30082|emb|CAA40748.1|alpha 1(VIII) collagen [Homo sapiens] Length = 744 Score = 33.5 bits (75), Expect = 1.6 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 529 LGPPSLEGEKHGPGLPS----SGHEANCTRHLHTHPGQPGARGLSPRP 572 +GPP + G K PGLP G LH PG+PGA G +P Sbjct: 509 IGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQP 556
>gi|6807830|emb|CAB70699.1|hypothetical protein [Homo sapiens] Length = 622 Score = 33.5 bits (75), Expect = 1.6 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 17/101 (16%) Query: 490 LELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGE------KHGPGL 543 ++L+ + + + N ++ K+++R A P G E E KHGP L Sbjct: 236 IKLRRTNYSLRFNCDQQAEQKKKKRHSSTGDSADAGPPAAGSARGEKEMEGVALKHGPSL 295 Query: 544 PSSGHEANCTRHLH-----------THPGQPGARGLSPRPE 573 P +A TR HPG P A +P PE Sbjct: 296 PQERKQAPSTRRDSAEPSSSRSVPVAHPGPPPASSQTPAPE 336
>gi|6330536|dbj|BAA86525.1|KIAA1211 protein [Homo sapiens] Length = 803 Score = 33.5 bits (75), Expect = 1.6 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 17/101 (16%) Query: 490 LELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGE------KHGPGL 543 ++L+ + + + N ++ K+++R A P G E E KHGP L Sbjct: 417 IKLRRTNYSLRFNCDQQAEQKKKKRHSSTGDSADAGPPAAGSARGEKEMEGVALKHGPSL 476 Query: 544 PSSGHEANCTRHLH-----------THPGQPGARGLSPRPE 573 P +A TR HPG P A +P PE Sbjct: 477 PQERKQAPSTRRDSAEPSSSRSVPVAHPGPPPASSQTPAPE 517
>gi|55960947|emb|CAI16377.1| sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C [Homo sapiens] Length = 962 Score = 33.1 bits (74), Expect = 2.1 Identities = 33/98 (33%), Positives = 37/98 (37%), Gaps = 18/98 (18%) Query: 501 QNRHPHSQHKERQRG-HQHQHPAPRSLPCLGPPSLEGEK-------------HGPGLPSS 546 QNR+ + R RG H PAPR L PP G+ HGP P Sbjct: 755 QNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRK 814 Query: 547 GHEANC---TRHLHTHPGQPGARGLSPRP-ECIRIFRL 580 G E +R L P G SPRP EC RL Sbjct: 815 GAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRL 852
>gi|30582723|gb|AAP35588.1|neural retina leucine zipper [Homo sapiens] gi|15214542|gb|AAH12395.1|
NRL protein [Homo sapiens] gi|5453802|ref|NP_006168.1|
neural retina leucine zipper [Homo sapiens] gi|28071146|emb|CAD61954.1|
unnamed protein product [Homo sapiens] gi|28070984|emb|CAD61873.1|
unnamed protein product [Homo sapiens] gi|284489|pir||A41796 neural retina leucine zipper protein - human gi|2232011|gb|AAB82768.1|
neural retinal-specific leucine zipper protein [Homo sapiens] gi|1709348|sp|P54845|NRL_HUMAN
Neural retina-specific leucine zipper protein (NRL) (D14S46E) gi|404051|gb|AAA96828.1|
leucine zipper Length = 237 Score = 33.1 bits (74), Expect = 2.1 Identities = 46/193 (23%), Positives = 76/193 (39%), Gaps = 26/193 (13%) Query: 527 PCLGPPSLEGEKHG--PGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAI 584 P P + G G PGL A + L G A GLSP E + + + G + Sbjct: 51 PTFSEPGMVGATEGTRPGLEELYWLATLQQQL----GAGEALGLSPE-EAMELLQGQGPV 105 Query: 585 PTA------PFIFLSRGLVNMEPA-----SGEVGMCWGRHSRKLEAGGKRKEKQLQELAE 633 P P G +++ A + V M +R+L G+ + +L++ Sbjct: 106 PVDGPHGYYPGSPEETGAQHVQLAERFSDAALVSMSVRELNRQLRGCGRDEALRLKQRRR 165 Query: 634 LVRSQAPANSAPIKRAGSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRC-- 691 ++++ A + KR R +GLE +R L L+ ++ R+A L RC Sbjct: 166 TLKNRGYAQACRSKRLQQR----RGLEAERARLAAQLDALRAEVARLARERDLYKARCDR 221 Query: 692 --SESPGTSKVTH 702 S PG+ +H Sbjct: 222 LTSSGPGSGDPSH 234
>gi|12081909|dbj|BAB20670.1|semaphorin Y [Homo sapiens] Length = 930 Score = 33.1 bits (74), Expect = 2.1 Identities = 33/98 (33%), Positives = 37/98 (37%), Gaps = 18/98 (18%) Query: 501 QNRHPHSQHKERQRG-HQHQHPAPRSLPCLGPPSLEGEK-------------HGPGLPSS 546 QNR+ + R RG H PAPR L PP G+ HGP P Sbjct: 723 QNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRK 782 Query: 547 GHEANC---TRHLHTHPGQPGARGLSPRP-ECIRIFRL 580 G E +R L P G SPRP EC RL Sbjct: 783 GAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRL 820
>gi|55960946|emb|CAI16376.1| sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C [Homo sapiens] Length = 922 Score = 33.1 bits (74), Expect = 2.1 Identities = 33/98 (33%), Positives = 37/98 (37%), Gaps = 18/98 (18%) Query: 501 QNRHPHSQHKERQRG-HQHQHPAPRSLPCLGPPSLEGEK-------------HGPGLPSS 546 QNR+ + R RG H PAPR L PP G+ HGP P Sbjct: 715 QNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRK 774 Query: 547 GHEANC---TRHLHTHPGQPGARGLSPRP-ECIRIFRL 580 G E +R L P G SPRP EC RL Sbjct: 775 GAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRL 812
>gi|55960948|emb|CAI16378.1|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C [Homo sapiens] gi|16306552|ref|NP_112175.2|
semaphorin Y [Homo sapiens] Length = 930 Score = 33.1 bits (74), Expect = 2.1 Identities = 33/98 (33%), Positives = 37/98 (37%), Gaps = 18/98 (18%) Query: 501 QNRHPHSQHKERQRG-HQHQHPAPRSLPCLGPPSLEGEK-------------HGPGLPSS 546 QNR+ + R RG H PAPR L PP G+ HGP P Sbjct: 723 QNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRK 782 Query: 547 GHEANC---TRHLHTHPGQPGARGLSPRP-ECIRIFRL 580 G E +R L P G SPRP EC RL Sbjct: 783 GAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRL 820
>gi|18462034|gb|AAL72100.1|semaphorin Y [Homo sapiens] Length = 962 Score = 33.1 bits (74), Expect = 2.1 Identities = 33/98 (33%), Positives = 37/98 (37%), Gaps = 18/98 (18%) Query: 501 QNRHPHSQHKERQRG-HQHQHPAPRSLPCLGPPSLEGEK-------------HGPGLPSS 546 QNR+ + R RG H PAPR L PP G+ HGP P Sbjct: 755 QNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRK 814 Query: 547 GHEANC---TRHLHTHPGQPGARGLSPRP-ECIRIFRL 580 G E +R L P G SPRP EC RL Sbjct: 815 GAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRL 852
>gi|18462032|gb|AAL72099.1|semaphorin Y short isoform 2 [Homo sapiens] Length = 922 Score = 33.1 bits (74), Expect = 2.1 Identities = 33/98 (33%), Positives = 37/98 (37%), Gaps = 18/98 (18%) Query: 501 QNRHPHSQHKERQRG-HQHQHPAPRSLPCLGPPSLEGEK-------------HGPGLPSS 546 QNR+ + R RG H PAPR L PP G+ HGP P Sbjct: 715 QNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRK 774 Query: 547 GHEANC---TRHLHTHPGQPGARGLSPRP-ECIRIFRL 580 G E +R L P G SPRP EC RL Sbjct: 775 GAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRL 812
>gi|18462030|gb|AAL72098.1|semaphorin Y short isoform 1 [Homo sapiens] gi|20532413|sp|Q9H3T2|SEM6C_HUMAN
Semaphorin 6C precursor (Semaphorin Y) (Sema Y) Length = 930 Score = 33.1 bits (74), Expect = 2.1 Identities = 33/98 (33%), Positives = 37/98 (37%), Gaps = 18/98 (18%) Query: 501 QNRHPHSQHKERQRG-HQHQHPAPRSLPCLGPPSLEGEK-------------HGPGLPSS 546 QNR+ + R RG H PAPR L PP G+ HGP P Sbjct: 723 QNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRK 782 Query: 547 GHEANC---TRHLHTHPGQPGARGLSPRP-ECIRIFRL 580 G E +R L P G SPRP EC RL Sbjct: 783 GAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRL 820
>gi|7512661|pir||T34537 hypothetical protein DKFZp434M231.1 - human (fragment) gi|6102858|emb|CAB59243.1|hypothetical protein [Homo sapiens] Length = 294 Score = 33.1 bits (74), Expect = 2.1 Identities = 33/98 (33%), Positives = 37/98 (37%), Gaps = 18/98 (18%) Query: 501 QNRHPHSQHKERQRG-HQHQHPAPRSLPCLGPPSLEGEK-------------HGPGLPSS 546 QNR+ + R RG H PAPR L PP G+ HGP P Sbjct: 87 QNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRK 146 Query: 547 GHEANC---TRHLHTHPGQPGARGLSPRP-ECIRIFRL 580 G E +R L P G SPRP EC RL Sbjct: 147 GAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRL 184
>gi|3005748|gb|AAC09365.1|unknown [Homo sapiens] Length = 446 Score = 33.1 bits (74), Expect = 2.1 Identities = 33/98 (33%), Positives = 37/98 (37%), Gaps = 18/98 (18%) Query: 501 QNRHPHSQHKERQRG-HQHQHPAPRSLPCLGPPSLEGEK-------------HGPGLPSS 546 QNR+ + R RG H PAPR L PP G+ HGP P Sbjct: 239 QNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRK 298 Query: 547 GHEANC---TRHLHTHPGQPGARGLSPRP-ECIRIFRL 580 G E +R L P G SPRP EC RL Sbjct: 299 GAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRL 336
>gi|14017955|dbj|BAB47498.1|KIAA1869 protein [Homo sapiens] Length = 935 Score = 33.1 bits (74), Expect = 2.1 Identities = 33/98 (33%), Positives = 37/98 (37%), Gaps = 18/98 (18%) Query: 501 QNRHPHSQHKERQRG-HQHQHPAPRSLPCLGPPSLEGEK-------------HGPGLPSS 546 QNR+ + R RG H PAPR L PP G+ HGP P Sbjct: 728 QNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRK 787 Query: 547 GHEANC---TRHLHTHPGQPGARGLSPRP-ECIRIFRL 580 G E +R L P G SPRP EC RL Sbjct: 788 GAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRL 825
>gi|4507869|ref|NP_003361.1|vasodilator-stimulated phosphoprotein isoform 1 [Homo sapiens] gi|23398520|gb|AAH38224.1|
Vasodilator-stimulated phosphoprotein [Homo sapiens] gi|1085412|pir||S51797 vasodilator-stimulated phosphoprotein - human gi|624964|emb|CAA86523.1|
vasodilator-stimulated phosphoprotein (VASP) [Homo sapiens] gi|1718079|sp|P50552|VASP_HUMAN
Vasodilator-stimulated phosphoprotein (VASP) Length = 380 Score = 32.7 bits (73), Expect = 2.7 Identities = 42/188 (22%), Positives = 67/188 (35%), Gaps = 17/188 (9%) Query: 480 PDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRS---LPCLGPPSLEG 536 P + +PN +K+ + S+H ER+ + PAP + P GPP G Sbjct: 122 PALPTWSVPNGPSPEEVEQQKRQQPGPSEHIERRVSNAGGPPAPPAGGPPPPPGPPPPPG 181 Query: 537 EKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAIPTAPFIFLSRGL 596 PGLP SG A H G P P P G AP + + Sbjct: 182 PPPPPGLPPSGVPAAA----HGAGGGP-----PPAPPLPAAQGPGGGGAGAPGLAAAIAG 232 Query: 597 VNMEPASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIKRAGSREPSD 656 + S + G + K E+G ++E+ ++ + A + G + P D Sbjct: 233 AKLRKVSKQEEASGGPTAPKAESGRSGGGGLMEEMNAMLARRRKAT-----QVGEKTPKD 287 Query: 657 QGLETQRP 664 + + P Sbjct: 288 ESANQEEP 295
>gi|27368086|gb|AAN86964.1|retinitis pigmentosa 1-like 1 protein [Homo sapiens] gi|40255278|ref|NP_849188.3|
retinitis pigmentosa 1-like 1 [Homo sapiens] Length = 2480 Score = 32.7 bits (73), Expect = 2.7 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 12/82 (14%) Query: 640 PANSAPIKRAGSREPSDQGLETQRP----FLITGLEESGCQLVRVAPSPHLLSQRCSESP 695 P S ++G+ P ++ +T +P L G E G A PH C P Sbjct: 778 PHTSDSCSKSGAASPGEEARDTPQPSSPLVLQVGRPEQG------AVGPH--RSHCCSQP 829 Query: 696 GTSKVTHAREGSQWESSSECGK 717 GT A+ G E+S CG+ Sbjct: 830 GTQPAQEAQRGPSPEASWLCGR 851
>gi|27368084|gb|AAN86963.1|retinitis pigmentosa 1-like 1 protein [Homo sapiens] Length = 2464 Score = 32.7 bits (73), Expect = 2.7 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 12/82 (14%) Query: 640 PANSAPIKRAGSREPSDQGLETQRP----FLITGLEESGCQLVRVAPSPHLLSQRCSESP 695 P S ++G+ P ++ +T +P L G E G A PH C P Sbjct: 778 PHTSDSCSKSGAASPGEEARDTPQPSSPLVLQVGRPEQG------AVGPH--RSHCCSQP 829 Query: 696 GTSKVTHAREGSQWESSSECGK 717 GT A+ G E+S CG+ Sbjct: 830 GTQPAQEAQRGPSPEASWLCGR 851
>gi|27368082|gb|AAN86962.1|retinitis pigmentosa 1-like 1 protein [Homo sapiens] Length = 2448 Score = 32.7 bits (73), Expect = 2.7 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 12/82 (14%) Query: 640 PANSAPIKRAGSREPSDQGLETQRP----FLITGLEESGCQLVRVAPSPHLLSQRCSESP 695 P S ++G+ P ++ +T +P L G E G A PH C P Sbjct: 778 PHTSDSCSKSGAASPGEEARDTPQPSSPLVLQVGRPEQG------AVGPH--RSHCCSQP 829 Query: 696 GTSKVTHAREGSQWESSSECGK 717 GT A+ G E+S CG+ Sbjct: 830 GTQPAQEAQRGPSPEASWLCGR 851
>gi|27368080|gb|AAN86961.1|retinitis pigmentosa 1-like 1 protein [Homo sapiens] Length = 2432 Score = 32.7 bits (73), Expect = 2.7 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 12/82 (14%) Query: 640 PANSAPIKRAGSREPSDQGLETQRP----FLITGLEESGCQLVRVAPSPHLLSQRCSESP 695 P S ++G+ P ++ +T +P L G E G A PH C P Sbjct: 778 PHTSDSCSKSGAASPGEEARDTPQPSSPLVLQVGRPEQG------AVGPH--RSHCCSQP 829 Query: 696 GTSKVTHAREGSQWESSSECGK 717 GT A+ G E+S CG+ Sbjct: 830 GTQPAQEAQRGPSPEASWLCGR 851
>gi|27368078|gb|AAN86960.1|retinitis pigmentosa 1-like 1 protein [Homo sapiens] Length = 2416 Score = 32.7 bits (73), Expect = 2.7 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 12/82 (14%) Query: 640 PANSAPIKRAGSREPSDQGLETQRP----FLITGLEESGCQLVRVAPSPHLLSQRCSESP 695 P S ++G+ P ++ +T +P L G E G A PH C P Sbjct: 778 PHTSDSCSKSGAASPGEEARDTPQPSSPLVLQVGRPEQG------AVGPH--RSHCCSQP 829 Query: 696 GTSKVTHAREGSQWESSSECGK 717 GT A+ G E+S CG+ Sbjct: 830 GTQPAQEAQRGPSPEASWLCGR 851
>gi|27368076|gb|AAN86959.1|retinitis pigmentosa 1-like 1 protein [Homo sapiens] Length = 2400 Score = 32.7 bits (73), Expect = 2.7 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 12/82 (14%) Query: 640 PANSAPIKRAGSREPSDQGLETQRP----FLITGLEESGCQLVRVAPSPHLLSQRCSESP 695 P S ++G+ P ++ +T +P L G E G A PH C P Sbjct: 778 PHTSDSCSKSGAASPGEEARDTPQPSSPLVLQVGRPEQG------AVGPH--RSHCCSQP 829 Query: 696 GTSKVTHAREGSQWESSSECGK 717 GT A+ G E+S CG+ Sbjct: 830 GTQPAQEAQRGPSPEASWLCGR 851
>gi|51475739|ref|XP_496843.1|PREDICTED: similar to Uncx4.1 [Homo sapiens] Length = 1106 Score = 32.7 bits (73), Expect = 2.7 Identities = 77/311 (24%), Positives = 109/311 (35%), Gaps = 77/311 (24%) Query: 447 WAIAPKGPGLAGV------PHSMPRCVQGGRAETKEVGLP-DFQRFFIPNLELKSSGINR 499 W AP+ PG H CV+ G+ + GL ++R P+L + G R Sbjct: 186 WVTAPQKPGRLEKGRRQHPSHQNSGCVRTGKRRGQ--GLQRGWKRRDGPSLSFRPGG--R 241 Query: 500 KQNRH---PHSQHKERQRGHQHQHPAPR--------SLP----CLGPPSLEGEKHGPGLP 544 H P +Q K+R+ G P PR ++P C GPP K+G P Sbjct: 242 LLPPHLPWPVAQAKDRRFGKAPLAPWPRVCGKKAVLAVPWEGGCRGPP-----KYGSPGP 296 Query: 545 SSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAIPTAPFIFLSRGLVNMEPASG 604 S G EA P P +G P P + F +S+G P +G Sbjct: 297 S-GREA---------PIFP-FKGFRPHPRNVG------------FDTVSKG-----PKTG 328 Query: 605 EVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIKRAGSREP---SDQGLET 661 G C R+ +G + RS + A AP R GS+ P S G Sbjct: 329 VEGGCGSAVQRQDASGPGTR-----------RSPSGARPAPQVRGGSQVPEVRSQSGKLA 377 Query: 662 QRP----FLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVTHAREGSQWESSSECGK 717 +RP F + C A + R PG ++V ++W K Sbjct: 378 ERPRLRAFRVEKALAGTCSSSGKAQLRARSAARLHSCPGRAEVWFQNRRAKWRKKENTKK 437 Query: 718 GAERRMYNPGP 728 G R +N P Sbjct: 438 GPGRPAHNSHP 448
>gi|51467623|ref|XP_376909.2|PREDICTED: similar to hypothetical protein FLJ25955 [Homo sapiens] Length = 792 Score = 32.7 bits (73), Expect = 2.7 Identities = 17/47 (36%), Positives = 22/47 (46%) Query: 372 PWTKWALSDYPMQGQALNAGPQVLQLPILRCYSVSEPGEGLPSKLWQ 418 P T W ++ P GQA + GP L P + S P GL S W+ Sbjct: 186 PCTSWVVALPPQAGQACHRGPDWLAAPYPALHPRSTPDLGLTSTGWR 232
>gi|42559826|sp|Q8IWN7|RP1L1_HUMANRetinitis pigmentosa 1-like 1 protein Length = 2480 Score = 32.7 bits (73), Expect = 2.7 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 12/82 (14%) Query: 640 PANSAPIKRAGSREPSDQGLETQRP----FLITGLEESGCQLVRVAPSPHLLSQRCSESP 695 P S ++G+ P ++ +T +P L G E G A PH C P Sbjct: 778 PHTSDSCSKSGAASPGEEARDTPQPSSPLVLQVGRPEQG------AVGPH--RSHCCSQP 829 Query: 696 GTSKVTHAREGSQWESSSECGK 717 GT A+ G E+S CG+ Sbjct: 830 GTQPAQEAQRGPSPEASWLCGR 851
>gi|11414808|emb|CAA67147.2|vasodilator-stimulated phosphoprotein [Homo sapiens] Length = 378 Score = 32.7 bits (73), Expect = 2.7 Identities = 42/188 (22%), Positives = 67/188 (35%), Gaps = 17/188 (9%) Query: 480 PDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRS---LPCLGPPSLEG 536 P + +PN +K+ + S+H ER+ + PAP + P GPP G Sbjct: 120 PALPTWSVPNGPSPEEVEQQKRQQPGPSEHIERRVSNAGGPPAPPAGGPPPPPGPPPPPG 179 Query: 537 EKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAIPTAPFIFLSRGL 596 PGLP SG A H G P P P G AP + + Sbjct: 180 PPPPPGLPPSGVPAAA----HGAGGGP-----PPAPPLPAAQGPGGGGAGAPGLAAAIAG 230 Query: 597 VNMEPASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIKRAGSREPSD 656 + S + G + K E+G ++E+ ++ + A + G + P D Sbjct: 231 AKLRKVSKQEEASGGPTAPKAESGRSGGGGLMEEMNAMLARRRKAT-----QVGEKTPKD 285 Query: 657 QGLETQRP 664 + + P Sbjct: 286 ESANQEEP 293
>gi|55663614|emb|CAH74130.1|collagen, type IV, alpha 1 [Homo sapiens] gi|55667870|emb|CAH71365.1|
collagen, type IV, alpha 1 [Homo sapiens] Length = 1669 Score = 32.3 bits (72), Expect = 3.5 Identities = 49/165 (29%), Positives = 59/165 (35%), Gaps = 42/165 (25%) Query: 407 EPG-EGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAFGKKLWAIAPKGPGLAGVPHSMPR 465 EPG +G+P G+ K P P + P G K +P PG G P + R Sbjct: 265 EPGFQGMP------GVGEKGEP---GKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGR 315 Query: 466 CVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRS 525 QG + E E G P I L G +RG+ P PR Sbjct: 316 --QGPQGEKGEAGPPGPPGIVIGTGPLGEKG----------------ERGYPGT-PGPRG 356 Query: 526 LPCLGP---PSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 P GP P L G+ PGLP G PG PG RG Sbjct: 357 EP--GPKGFPGLPGQPGPPGLPVPGQAG--------APGFPGERG 391
>gi|1082343|pir||S50832 atrophin-1 - human Length = 1184 Score = 32.3 bits (72), Expect = 3.5 Identities = 40/161 (24%), Positives = 54/161 (33%), Gaps = 18/161 (11%) Query: 426 GPRCQSSPAAKETPYAFGKKLWAIAP---KGPGLAGVPHSMPRCVQGGRAETKEVGLPDF 482 G Q P +PYA G+ + + P KGP LA PHS+P A + Sbjct: 319 GLGAQPLPGHLPSPYAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRF---PY 375 Query: 483 QRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSL------PCLGPPSLEG 536 + SS + + P + + H P P SL P PSL Sbjct: 376 SSSSSSSAAASSSSSSSSSSASPFPA-SQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPS 434 Query: 537 E---KHGPGLPSSGHE--ANCTRHLHTHPGQPGARGLSPRP 572 + GP P AN H P GA+ + P Sbjct: 435 QAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPP 475
>gi|284018|pir||A45290 calcium channel protein type L - human Length = 2220 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1971 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 2030 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 2031 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 2059
>gi|4502953|ref|NP_000083.1|alpha 4 type IV collagen precursor [Homo sapiens] gi|1360674|pir||CGHU1B collagen alpha 4(IV) chain precursor - human gi|4160232|emb|CAA76763.1|
collagen alpha 4 type IV [Homo sapiens] gi|574806|emb|CAA56943.1|
type IV collagen alpha 4 chain [Homo sapiens] gi|1705536|sp|P53420|CA44_HUMAN
Collagen alpha 4(IV) chain precursor Length = 1690 Score = 32.3 bits (72), Expect = 3.5 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 7/84 (8%) Query: 529 LGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAIPTAP 588 +GPP +G PGLP PG+PG+ GL P L G +P + Sbjct: 404 IGPPGPQGFPGLPGLPGEAGIPGRPDSAPGKPGKPGSPGLPGAP------GLQG-LPGSS 456 Query: 589 FIFLSRGLVNMEPASGEVGMCWGR 612 I+ S G + G+VG GR Sbjct: 457 VIYCSVGNPGPQGIKGKVGPPGGR 480
>gi|1071996|pir||A53317 collagen alpha 1(XV) chain precursor - human gi|461397|gb|AAA58429.1|alpha-1 type XV collagen gi|728996|sp|P39059|CA1E_HUMAN
Collagen alpha 1(XV) chain precursor Length = 1388 Score = 32.3 bits (72), Expect = 3.5 Identities = 51/194 (26%), Positives = 67/194 (34%), Gaps = 35/194 (18%) Query: 449 IAPKGP-GLAGVPHSMPRCVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHS 507 + P GP GL G+P G R + GLP F P L+ + Sbjct: 822 VGPPGPDGLPGLPG-----FPGPRGPKGDTGLPGF-----PGLKGEQGEKGEPGAILTED 871 Query: 508 QHKER---QRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPS-------SGHEANCTRHLH 557 ER ++G H AP + GPP +GE PG P G + + + Sbjct: 872 IPLERLMGKKGEPGMHGAPGPMGPKGPPGHKGEFGLPGRPGRPGLNGLKGTKGDPGVIMQ 931 Query: 558 THPGQPGARGLSPRPECIRIFRLSGA---IPTAPFIFL--------SRGLVNMEPASGEV 606 PG PG G P + + GA IP P + S L+ GE Sbjct: 932 GPPGLPGPPGPPGPPGA--VINIKGAIFPIPVRPHCKMPVDTAHPGSPELITFHGVKGEK 989 Query: 607 GMCWGRHSRKLEAG 620 G WG K E G Sbjct: 990 G-SWGLPGSKGEKG 1002
>gi|292275|gb|AAA02501.1| L-type voltage-dependent calcium channel Length = 2180 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1930 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1989 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1990 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 2018
>gi|54144648|ref|NP_000710.4|calcium channel, voltage-dependent, L type, alpha 1C subunit [Homo sapiens] Length = 2138 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1888 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1947 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1948 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1976
>gi|862330|dbj|BAA06626.1|DRPLA [Homo sapiens] Length = 1185 Score = 32.3 bits (72), Expect = 3.5 Identities = 40/161 (24%), Positives = 54/161 (33%), Gaps = 18/161 (11%) Query: 426 GPRCQSSPAAKETPYAFGKKLWAIAP---KGPGLAGVPHSMPRCVQGGRAETKEVGLPDF 482 G Q P +PYA G+ + + P KGP LA PHS+P A + Sbjct: 319 GLGAQPLPGHLPSPYAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRF---PY 375 Query: 483 QRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSL------PCLGPPSLEG 536 + SS + + P + + H P P SL P PSL Sbjct: 376 SSSSSSSAAASSSSSSSSSSASPFPA-SQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPS 434 Query: 537 E---KHGPGLPSSGHE--ANCTRHLHTHPGQPGARGLSPRP 572 + GP P AN H P GA+ + P Sbjct: 435 QAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPP 475
>gi|56208098|emb|CAI18789.1|OTTHUMP00000028851 [Homo sapiens] gi|56202389|emb|CAI19318.1| OTTHUMP00000028851 [Homo sapiens] Length = 720 Score = 32.3 bits (72), Expect = 3.5 Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 527 PCLGPPSLEGE--KHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPEC 574 P LGPP E P LPSSG +A TR PG P + PR C Sbjct: 153 PLLGPPVGEPRLLASSPALPSSGAQARLTR----APGPPHSAHALPRESC 198
>gi|56207050|emb|CAI18276.1|synaptic Ras GTPase activating protein 1 homolog (rat) [Homo sapiens] gi|56203650|emb|CAI21855.1|
synaptic Ras GTPase activating protein 1 homolog (rat) [Homo sapiens] gi|55663252|emb|CAH70911.1|
synaptic Ras GTPase activating protein 1 homolog (rat) [Homo sapiens] gi|54607096|ref|NP_006763.1|
synaptic Ras GTPase activating protein 1 [Homo sapiens] gi|34098679|sp|Q96PV0|SNGP_HUMAN
Ras GTPase-activating protein SynGAP (Synaptic Ras-GTPase-activating protein 1) (Synaptic Ras-GAP 1) (Neuronal RasGAP) Length = 1328 Score = 32.3 bits (72), Expect = 3.5 Identities = 51/196 (26%), Positives = 71/196 (36%), Gaps = 17/196 (8%) Query: 530 GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAIPTAPF 589 GPP G G G PSS H + H H G+P +P + LS +P P Sbjct: 925 GPPGGHGGGGGHGPPSSHHHHH--HHHHHRGGEPPGDTFAPFHGYSKSEDLSSGVPKPP- 981 Query: 590 IFLSRGLVNMEPASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIKRA 649 + +++ S E G +R+ + + L + Q PA S P Sbjct: 982 ---AASILHSHSYSDEFGPSGTDFTRRQLSLQDNLQHMLSPPQITIGPQRPAPSGP--GG 1036 Query: 650 GSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTS-------KVTH 702 GS S G Q P L G +S V A P S +SP S + + Sbjct: 1037 GSGGGSGGGGGGQPPPLQRG--KSQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQSL 1094 Query: 703 AREGSQWESSSECGKG 718 ++EGS S G G Sbjct: 1095 SKEGSIGGSGGSGGGG 1110
>gi|56207049|emb|CAI18275.1|OTTHUMP00000064825 [Homo sapiens] Length = 1343 Score = 32.3 bits (72), Expect = 3.5 Identities = 51/196 (26%), Positives = 71/196 (36%), Gaps = 17/196 (8%) Query: 530 GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAIPTAPF 589 GPP G G G PSS H + H H G+P +P + LS +P P Sbjct: 940 GPPGGHGGGGGHGPPSSHHHHH--HHHHHRGGEPPGDTFAPFHGYSKSEDLSSGVPKPP- 996 Query: 590 IFLSRGLVNMEPASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIKRA 649 + +++ S E G +R+ + + L + Q PA S P Sbjct: 997 ---AASILHSHSYSDEFGPSGTDFTRRQLSLQDNLQHMLSPPQITIGPQRPAPSGP--GG 1051 Query: 650 GSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTS-------KVTH 702 GS S G Q P L G +S V A P S +SP S + + Sbjct: 1052 GSGGGSGGGGGGQPPPLQRG--KSQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQSL 1109 Query: 703 AREGSQWESSSECGKG 718 ++EGS S G G Sbjct: 1110 SKEGSIGGSGGSGGGG 1125
>gi|56203649|emb|CAI21854.1| synaptic Ras GTPase activating protein 1 homolog (rat) [Homo sapiens] gi|55663251|emb|CAH70910.1|synaptic Ras GTPase activating protein 1 homolog (rat) [Homo sapiens] Length = 1284 Score = 32.3 bits (72), Expect = 3.5 Identities = 51/196 (26%), Positives = 71/196 (36%), Gaps = 17/196 (8%) Query: 530 GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAIPTAPF 589 GPP G G G PSS H + H H G+P +P + LS +P P Sbjct: 925 GPPGGHGGGGGHGPPSSHHHHH--HHHHHRGGEPPGDTFAPFHGYSKSEDLSSGVPKPP- 981 Query: 590 IFLSRGLVNMEPASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIKRA 649 + +++ S E G +R+ + + L + Q PA S P Sbjct: 982 ---AASILHSHSYSDEFGPSGTDFTRRQLSLQDNLQHMLSPPQITIGPQRPAPSGP--GG 1036 Query: 650 GSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTS-------KVTH 702 GS S G Q P L G +S V A P S +SP S + + Sbjct: 1037 GSGGGSGGGGGGQPPPLQRG--KSQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQSL 1094 Query: 703 AREGSQWESSSECGKG 718 ++EGS S G G Sbjct: 1095 SKEGSIGGSGGSGGGG 1110
>gi|56203648|emb|CAI21853.1| synaptic Ras GTPase activating protein 1 homolog (rat) [Homo sapiens] gi|55663250|emb|CAH70909.1|synaptic Ras GTPase activating protein 1 homolog (rat) [Homo sapiens] Length = 1284 Score = 32.3 bits (72), Expect = 3.5 Identities = 51/196 (26%), Positives = 71/196 (36%), Gaps = 17/196 (8%) Query: 530 GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAIPTAPF 589 GPP G G G PSS H + H H G+P +P + LS +P P Sbjct: 881 GPPGGHGGGGGHGPPSSHHHHH--HHHHHRGGEPPGDTFAPFHGYSKSEDLSSGVPKPP- 937 Query: 590 IFLSRGLVNMEPASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIKRA 649 + +++ S E G +R+ + + L + Q PA S P Sbjct: 938 ---AASILHSHSYSDEFGPSGTDFTRRQLSLQDNLQHMLSPPQITIGPQRPAPSGP--GG 992 Query: 650 GSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTS-------KVTH 702 GS S G Q P L G +S V A P S +SP S + + Sbjct: 993 GSGGGSGGGGGGQPPPLQRG--KSQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQSL 1050 Query: 703 AREGSQWESSSECGKG 718 ++EGS S G G Sbjct: 1051 SKEGSIGGSGGSGGGG 1066
>gi|55957355|emb|CAI17044.1| OTTHUMP00000063794 [Homo sapiens] gi|55958453|emb|CAI12548.1|OTTHUMP00000063794 [Homo sapiens] Length = 1396 Score = 32.3 bits (72), Expect = 3.5 Identities = 51/194 (26%), Positives = 67/194 (34%), Gaps = 35/194 (18%) Query: 449 IAPKGP-GLAGVPHSMPRCVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHS 507 + P GP GL G+P G R + GLP F P L+ + Sbjct: 830 VGPPGPDGLPGLPG-----FPGPRGPKGDTGLPGF-----PGLKGEQGEKGEPGAILTED 879 Query: 508 QHKER---QRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPS-------SGHEANCTRHLH 557 ER ++G H AP + GPP +GE PG P G + + + Sbjct: 880 IPLERLMGKKGEPGMHGAPGPMGPKGPPGHKGEFGLPGRPGRPGLNGLKGTKGDPGVIMQ 939 Query: 558 THPGQPGARGLSPRPECIRIFRLSGA---IPTAPFIFL--------SRGLVNMEPASGEV 606 PG PG G P + + GA IP P + S L+ GE Sbjct: 940 GPPGLPGPPGPPGPPGA--VINIKGAIFPIPVRPHCKMPVDTAHPGSPELITFHGVKGEK 997 Query: 607 GMCWGRHSRKLEAG 620 G WG K E G Sbjct: 998 G-SWGLPGSKGEKG 1010
>gi|21636579|gb|AAM70049.1|jejunum L-type calcium channel alpha1C subunit [Homo sapiens] Length = 2138 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1888 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1947 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1948 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1976
>gi|13623451|gb|AAH06325.1|G-2 and S-phase expressed 1 [Homo sapiens] gi|20127556|ref|NP_057510.2|
G-2 and S-phase expressed 1 [Homo sapiens] gi|22001632|sp|Q9NYZ3|GTSE_HUMAN
G2 and S phase expressed protein 1 (B99 homolog) Length = 720 Score = 32.3 bits (72), Expect = 3.5 Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 527 PCLGPPSLEGE--KHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPEC 574 P LGPP E P LPSSG +A TR PG P + PR C Sbjct: 153 PLLGPPVGEPRLLASSPALPSSGAQARLTR----APGPPHSAHALPRESC 198
>gi|7656985|ref|NP_001836.1|alpha 1 type IV collagen preproprotein [Homo sapiens] gi|71411|pir||CGHU4B collagen alpha 1(IV) chain precursor - human gi|1345649|sp|P02462|CA14_HUMAN
Collagen alpha 1(IV) chain precursor gi|180803|gb|AAA53098.1|
alpha-1 type IV collagen Length = 1669 Score = 32.3 bits (72), Expect = 3.5 Identities = 49/165 (29%), Positives = 59/165 (35%), Gaps = 42/165 (25%) Query: 407 EPG-EGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAFGKKLWAIAPKGPGLAGVPHSMPR 465 EPG +G+P G+ K P P + P G K +P PG G P + R Sbjct: 265 EPGFQGMP------GVGEKGEP---GKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGR 315 Query: 466 CVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRS 525 QG + E E G P I L G +RG+ P PR Sbjct: 316 --QGPQGEKGEAGPPGPPGIVIGTGPLGEKG----------------ERGYPGT-PGPRG 356 Query: 526 LPCLGP---PSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 P GP P L G+ PGLP G PG PG RG Sbjct: 357 EP--GPKGFPGLPGQPGPPGLPVPGQAG--------APGFPGERG 391
>gi|49904183|gb|AAH75828.1|G-2 and S-phase expressed 1 [Homo sapiens] Length = 720 Score = 32.3 bits (72), Expect = 3.5 Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 527 PCLGPPSLEGE--KHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPEC 574 P LGPP E P LPSSG +A TR PG P + PR C Sbjct: 153 PLLGPPVGEPRLLASSPALPSSGAQARLTR----APGPPHSAHALPRESC 198
>gi|38158015|ref|NP_061187.2|mastermind-like 3 [Homo sapiens] Length = 1133 Score = 32.3 bits (72), Expect = 3.5 Identities = 47/175 (26%), Positives = 69/175 (39%), Gaps = 16/175 (9%) Query: 559 HPGQPGARGLS-PRPECI-RIFRLSGAIPTAPFIFLSRGLVNMEP-ASGEVGMCWGRHSR 615 HP G G + PRP+ R+ L G + + R L M SGE+G S Sbjct: 924 HPQMKGPVGQALPRPQAPPRLQSLMGTVQQGAQSWQQRSLQGMPGRTSGELGPFNNGASY 983 Query: 616 KLEAGGKRKEKQLQELAELVRSQAPANSAPIKR----AGSRE-----PSDQGLETQRPFL 666 L+AG R KQ L +S AN+ ++ A R+ P QG RP + Sbjct: 984 PLQAGQPRLTKQHFPQG-LSQSVVDANTGTVRTLNPAAMGRQMMPSLPGQQGTSQARPMV 1042 Query: 667 ITGLEES--GCQLVRVAPSPHLLSQRCSESPGTSKVTHAREGSQWESSSECGKGA 719 ++GL + G P+ + S +P + + R Q S + G GA Sbjct: 1043 MSGLSQGVPGMPAFSQPPAQQQIPSG-SFAPSSQSQAYERNAPQDVSYNYSGDGA 1096
>gi|463082|gb|AAA51901.1|calcium channel L-type alpha 1 subunit [Homo sapiens] Length = 2109 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1859 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1918 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1919 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1947
>gi|463079|gb|AAA51900.1|cardiac L-type voltage-dependent calcium channel a1 subunit [Homo sapiens] Length = 2144 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1894 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1953 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1954 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1982
>gi|27529961|dbj|BAB67831.2| KIAA1938 protein [Homo sapiens] Length = 1376 Score = 32.3 bits (72), Expect = 3.5 Identities = 51/196 (26%), Positives = 71/196 (36%), Gaps = 17/196 (8%) Query: 530 GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAIPTAPF 589 GPP G G G PSS H + H H G+P +P + LS +P P Sbjct: 973 GPPGGHGGGGGHGPPSSHHHHH--HHHHHRGGEPPGDTFAPFHGYSKSEDLSSGVPKPP- 1029 Query: 590 IFLSRGLVNMEPASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIKRA 649 + +++ S E G +R+ + + L + Q PA S P Sbjct: 1030 ---AASILHSHSYSDEFGPSGTDFTRRQLSLQDNLQHMLSPPQITIGPQRPAPSGP--GG 1084 Query: 650 GSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTS-------KVTH 702 GS S G Q P L G +S V A P S +SP S + + Sbjct: 1085 GSGGGSGGGGGGQPPPLQRG--KSQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQSL 1142 Query: 703 AREGSQWESSSECGKG 718 ++EGS S G G Sbjct: 1143 SKEGSIGGSGGSGGGG 1158
>gi|3893879|gb|AAC78500.1|type XV collagen [Homo sapiens] Length = 1388 Score = 32.3 bits (72), Expect = 3.5 Identities = 51/194 (26%), Positives = 67/194 (34%), Gaps = 35/194 (18%) Query: 449 IAPKGP-GLAGVPHSMPRCVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHS 507 + P GP GL G+P G R + GLP F P L+ + Sbjct: 822 VGPPGPDGLPGLPG-----FPGPRGPKGDTGLPGF-----PGLKGEQGEKGEPGAILTED 871 Query: 508 QHKER---QRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPS-------SGHEANCTRHLH 557 ER ++G H AP + GPP +GE PG P G + + + Sbjct: 872 IPLERLMGKKGEPGMHGAPGPMGPKGPPGHKGEFGLPGRPGRPGLNGLKGTKGDPGVIMQ 931 Query: 558 THPGQPGARGLSPRPECIRIFRLSGA---IPTAPFIFL--------SRGLVNMEPASGEV 606 PG PG G P + + GA IP P + S L+ GE Sbjct: 932 GPPGLPGPPGPPGPPGA--VINIKGAIFPIPVRPHCKMPVDTAHPGSPELITFHGVKGEK 989 Query: 607 GMCWGRHSRKLEAG 620 G WG K E G Sbjct: 990 G-SWGLPGSKGEKG 1002
>gi|18641350|ref|NP_001846.2|alpha 1 type XV collagen precursor [Homo sapiens] Length = 1388 Score = 32.3 bits (72), Expect = 3.5 Identities = 51/194 (26%), Positives = 67/194 (34%), Gaps = 35/194 (18%) Query: 449 IAPKGP-GLAGVPHSMPRCVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHS 507 + P GP GL G+P G R + GLP F P L+ + Sbjct: 822 VGPPGPDGLPGLPG-----FPGPRGPKGDTGLPGF-----PGLKGEQGEKGEPGAILTED 871 Query: 508 QHKER---QRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPS-------SGHEANCTRHLH 557 ER ++G H AP + GPP +GE PG P G + + + Sbjct: 872 IPLERLMGKKGEPGMHGAPGPMGPKGPPGHKGEFGLPGRPGRPGLNGLKGTKGDPGVIMQ 931 Query: 558 THPGQPGARGLSPRPECIRIFRLSGA---IPTAPFIFL--------SRGLVNMEPASGEV 606 PG PG G P + + GA IP P + S L+ GE Sbjct: 932 GPPGLPGPPGPPGPPGA--VINIKGAIFPIPVRPHCKMPVDTAHPGSPELITFHGVKGEK 989 Query: 607 GMCWGRHSRKLEAG 620 G WG K E G Sbjct: 990 G-SWGLPGSKGEKG 1002
>gi|7513078|pir||T00492 hypothetical protein R29144_1 - human gi|2911259|gb|AAC04305.1| R29144_1 [Homo sapiens] Length = 725 Score = 32.3 bits (72), Expect = 3.5 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 488 PNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCL-GPPS 533 P+ + + + HPH++ K+ QRG QH P R+ P L G P+ Sbjct: 578 PHFDDTPAAARHRARAHPHAR-KQWQRGRQHSDPGARAAPALAGTPA 623
>gi|6911267|gb|AAF31459.1|B99 [Homo sapiens] Length = 720 Score = 32.3 bits (72), Expect = 3.5 Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 527 PCLGPPSLEGE--KHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPEC 574 P LGPP E P LPSSG +A TR PG P + PR C Sbjct: 153 PLLGPPVGEPRLLASSPALPSSGAQARLTR----APGPPHSAHALPRESC 198
>gi|1729771|emb|CAA99284.1|voltage-dependent L-type calcium channel alpha 1C subunit [Homo sapiens] Length = 2157 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1907 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1966 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1967 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1995
>gi|19584303|emb|CAD28452.1|hypothetical protein [Homo sapiens] Length = 902 Score = 32.3 bits (72), Expect = 3.5 Identities = 51/196 (26%), Positives = 71/196 (36%), Gaps = 17/196 (8%) Query: 530 GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAIPTAPF 589 GPP G G G PSS H + H H G+P +P + LS +P P Sbjct: 557 GPPGGHGGGGGHGPPSSHHHHH--HHHHHRGGEPPGDTFAPFHGYSKSEDLSSGVPKPP- 613 Query: 590 IFLSRGLVNMEPASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIKRA 649 + +++ S E G +R+ + + L + Q PA S P Sbjct: 614 ---AASILHSHSYSDEFGPSGTDFTRRQLSLQDNLQHMLSPPQITIGPQRPAPSGP--GG 668 Query: 650 GSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTS-------KVTH 702 GS S G Q P L G +S V A P S +SP S + + Sbjct: 669 GSGGGSGGGGGGQPPPLQRG--KSQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQSL 726 Query: 703 AREGSQWESSSECGKG 718 ++EGS S G G Sbjct: 727 SKEGSIGGSGGSGGGG 742
>gi|29549|emb|CAA68698.1|unnamed protein product [Homo sapiens] Length = 1212 Score = 32.3 bits (72), Expect = 3.5 Identities = 49/165 (29%), Positives = 59/165 (35%), Gaps = 42/165 (25%) Query: 407 EPG-EGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAFGKKLWAIAPKGPGLAGVPHSMPR 465 EPG +G+P G+ K P P + P G K +P PG G P + R Sbjct: 220 EPGFQGMP------GVGEKGEP---GKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGR 270 Query: 466 CVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRS 525 QG + E E G P I L G +RG+ P PR Sbjct: 271 --QGPQGEKGEAGPPGPPGIVIGTGPLGEKG----------------ERGYPGT-PGPRG 311 Query: 526 LPCLGP---PSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 P GP P L G+ PGLP G PG PG RG Sbjct: 312 EP--GPKGFPGLPGQPGPPGLPVPGQAG--------APGFPGERG 346
>gi|6165981|sp|Q13936|CAC1C_HUMANVoltage-dependent L-type calcium channel alpha-1C subunit (Voltage-gated calcium channel alpha subunit Cav1.2) (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) Length = 2221 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1971 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 2030 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 2031 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 2059
>gi|2960067|emb|CAA12174.1|voltage-dependent L-type calcium channel alpha-1C subunit [Homo sapiens] Length = 2138 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1888 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1947 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1948 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1976
>gi|508193|emb|CAA84352.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2186 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1936 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1995 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1996 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 2024
>gi|508191|emb|CAA84351.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2155 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1905 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1964 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1965 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1993
>gi|508189|emb|CAA84350.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2166 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1916 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1975 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1976 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 2004
>gi|508187|emb|CAA84349.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2158 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1908 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1967 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1968 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1996
>gi|508185|emb|CAA84348.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2139 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1889 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1948 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1949 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1977
>gi|509178|emb|CAA84353.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2173 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1923 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1982 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1983 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 2011
>gi|509048|emb|CAA84347.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2138 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1888 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1947 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1948 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1976
>gi|509168|emb|CAA84346.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2138 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1888 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1947 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1948 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1976
>gi|509068|emb|CAA84345.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2127 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1877 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1936 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1937 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1965
>gi|508201|emb|CAA84344.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2146 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1896 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1955 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1956 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1984
>gi|508199|emb|CAA84343.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2146 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1896 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1955 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1956 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1984
>gi|508197|emb|CAA84342.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2157 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1907 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1966 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1967 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1995
>gi|508195|emb|CAA84341.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2138 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1888 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1947 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1948 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1976
>gi|508183|emb|CAA84340.1|voltage-dependent L-type Ca channel alpha 1 subunit [Homo sapiens] Length = 2138 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1888 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1947 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1948 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 1976
>gi|463073|gb|AAA51899.1|L-type voltage-dependent cardiac calcium channel alpha 1 subunit Length = 2169 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1919 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 1978 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 1979 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 2007
>gi|14017849|dbj|BAB47445.1| KIAA1816 protein [Homo sapiens] Length = 1162 Score = 32.3 bits (72), Expect = 3.5 Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 18/176 (10%) Query: 559 HPGQPGARGLS-PRPECI-RIFRLSGAIPTAPFIFLSRGLVNMEP-ASGEVGMCWGRHSR 615 HP G G + PRP+ R+ L G + + R L M SGE+G S Sbjct: 953 HPQMKGPVGQALPRPQAPPRLQSLMGTVQQGAQSWQQRSLQGMPGRTSGELGPFNNGASY 1012 Query: 616 KLEAGGKRKEKQLQELAELVRSQAPANSAPIKR----AGSRE-----PSDQGLETQRPFL 666 L+AG R KQ L +S AN+ ++ A R+ P QG RP + Sbjct: 1013 PLQAGQPRLTKQHFPQG-LSQSVVDANTGTVRTLNPAAMGRQMMPSLPGQQGTSQARPMV 1071 Query: 667 ITGLEESGCQLVRVAPSPHLLSQRC---SESPGTSKVTHAREGSQWESSSECGKGA 719 ++GL + + A S H Q+ S +P + + R Q S + G GA Sbjct: 1072 MSGLSQGVPGM--PAFSQHPAQQQIPSGSFAPSSQSQAYERNAPQDVSYNYSGDGA 1125
>gi|466355|gb|AAA17030.1|L-type calcium channel (HFCC) Length = 2221 Score = 32.3 bits (72), Expect = 3.5 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEAN 551 L+S+ + R+ + H +++ RG L + +L P L S A+ Sbjct: 1971 LRSASLGRRASFHLECLKRQKDRGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPAS 2030 Query: 552 CTRHLHTHPGQPGARGLSPRPECIRIFRLSG 582 R T P PG+RG P+P + RL G Sbjct: 2031 FPRPFATPPATPGSRGWPPQP--VPTLRLEG 2059
>gi|225874|prf||1402236A collagen alpha1(IV) Length = 1642 Score = 32.3 bits (72), Expect = 3.5 Identities = 49/165 (29%), Positives = 59/165 (35%), Gaps = 42/165 (25%) Query: 407 EPG-EGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAFGKKLWAIAPKGPGLAGVPHSMPR 465 EPG +G+P G+ K P P + P G K +P PG G P + R Sbjct: 238 EPGFQGMP------GVGEKGEP---GKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGR 288 Query: 466 CVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRS 525 QG + E E G P I L G +RG+ P PR Sbjct: 289 --QGPQGEKGEAGPPGPPGIVIGTGPLGEKG----------------ERGYPGT-PGPRG 329 Query: 526 LPCLGP---PSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 P GP P L G+ PGLP G PG PG RG Sbjct: 330 EP--GPKGFPGLPGQPGPPGLPVPGQAG--------APGFPGERG 364
>gi|55958029|emb|CAI12875.1|immediate early response 5-like [Homo sapiens] Length = 404 Score = 32.0 bits (71), Expect = 4.6 Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 6/69 (8%) Query: 506 HSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSS--GHEANCTRHLHTHPGQP 563 H H ++Q HQHQHPAPR C + G G S G A H H GQP Sbjct: 118 HQLHLQQQL-HQHQHPAPRG--CAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQP 174 Query: 564 GARGLSPRP 572 L P P Sbjct: 175 -LEPLQPGP 182
>gi|4468289|emb|CAB37982.1|POU domain, class 3, transcription factor 2 [Homo sapiens] gi|51702521|ref|NP_005595.2|
POU domain, class 3, transcription factor 2 [Homo sapiens] Length = 443 Score = 32.0 bits (71), Expect = 4.6 Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGP 541 L G+ + H+ H H HQ P P P GPP G H P Sbjct: 210 LHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPP-PPQGPPGHPGAHHDP 258
>gi|972767|gb|AAB59611.1|POU-domain transcription factor gi|28202258|sp|P20265|PO3F2_HUMAN
POU domain, class 3, transcription factor 2 (Nervous-system specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2 protein) Length = 443 Score = 32.0 bits (71), Expect = 4.6 Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGP 541 L G+ + H+ H H HQ P P P GPP G H P Sbjct: 210 LHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPP-PPQGPPGHPGAHHDP 258
>gi|56204476|emb|CAI22267.1| collagen, type VIII, alpha 2 [Homo sapiens] gi|32964830|ref|NP_005193.1|collagen, type VIII, alpha 2 [Homo sapiens] gi|45644957|sp|P25067|CO8A2_HUMAN
Collagen alpha 2(VIII) chain precursor (Endothelial collagen) Length = 703 Score = 32.0 bits (71), Expect = 4.6 Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 13/126 (10%) Query: 529 LGPPSLEGEKHGPGLPSSGHEANC----TRHLHTHPGQPGARGLS--PRPECIRIFRLSG 582 +GP L G K PGLP E T PG PG+ G++ P P Sbjct: 474 IGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPG------PP 527 Query: 583 AIPTAPFIFLSRGLVNME-PASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPA 641 P AP F G+ + P G G G+ + G+ ++ S PA Sbjct: 528 GPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPA 587 Query: 642 NSAPIK 647 + P+K Sbjct: 588 SGMPVK 593
>gi|44681486|ref|NP_982258.1|immediate early response 5-like protein [Homo sapiens] gi|39795643|gb|AAH64028.1|
Similar to RIKEN cDNA 2610524G09 [Homo sapiens] Length = 237 Score = 32.0 bits (71), Expect = 4.6 Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 6/69 (8%) Query: 506 HSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSS--GHEANCTRHLHTHPGQP 563 H H ++Q HQHQHPAPR C + G G S G A H H GQP Sbjct: 118 HQLHLQQQL-HQHQHPAPRG--CAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQP 174 Query: 564 GARGLSPRP 572 L P P Sbjct: 175 -LEPLQPGP 182
>gi|346392|pir||S29334 transcription factor Brn-2 [validated] - human gi|35085|emb|CAA77990.1|N-Oct 3 octamer DNA (ATGCAAAT) binding protein with brn-2 POU domain [Homo sapiens] Length = 443 Score = 32.0 bits (71), Expect = 4.6 Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGP 541 L G+ + H+ H H HQ P P P GPP G H P Sbjct: 210 LHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPP-PPQGPPGHPGAHHDP 258
>gi|19919459|gb|AAM08285.1|homeobox protein GSH-2 [Homo sapiens] gi|50960715|gb|AAH75089.1|
Homeobox protein GSH-2 [Homo sapiens] gi|49902539|gb|AAH75090.1|
Homeobox protein GSH-2 [Homo sapiens] gi|18959212|ref|NP_573574.1|
homeobox protein GSH-2 [Homo sapiens] gi|12656455|gb|AAK00880.1|
homeobox protein 2 [Homo sapiens] gi|20138327|sp|Q9BZM3|GSH2_HUMAN
Homeobox protein GSH-2 gi|18676392|dbj|BAB84822.1|
homeobox protein GSH-2 [Homo sapiens] Length = 304 Score = 32.0 bits (71), Expect = 4.6 Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 520 HPAPRSLPCLG-PPSLEGEKHGPGLPSSGHEANC------TRHLHTHPGQPGA 565 HP P LG PP L GPG PS A C T HLH+ G GA Sbjct: 26 HPGPDFFIPLGMPPPLVMSVSGPGCPSRKSGAFCVCPLCVTSHLHSSRGSVGA 78
>gi|14336691|gb|AAK61224.1|Axin [Homo sapiens] gi|27501450|ref|NP_003493.1|
axin 1 isoform a [Homo sapiens] gi|20532378|sp|O15169|AXN1_HUMAN
Axin 1 (Axis inhibition protein 1) (hAxin) Length = 862 Score = 32.0 bits (71), Expect = 4.6 Identities = 44/186 (23%), Positives = 69/186 (37%), Gaps = 45/186 (24%) Query: 461 HSMPRCVQGGRAETKEVGLPDFQRFFIPNLE--LKSSGINRKQNRHPHSQHKERQRGHQH 518 H PRCV G A ++ + + +++ L++ G + P H+ GH Sbjct: 446 HFPPRCVDMGCAGLRDAHEENPESILDEHVQRVLRTPG-----RQSPGPGHRSPDSGHVA 500 Query: 519 QHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEANCT-----RHLHTHPGQPGAR------- 566 + P G HG +P SG + + RH+H H AR Sbjct: 501 KMPVALGGAASG--------HGKHVPKSGAKLDAAGLHHHRHVHHHVHHSTARPKEQVEA 552 Query: 567 ------------GLSPRPECIRIFRLSGAIPTAPFIFLSRGLVNMEPASGEVGMCWGRHS 614 GL P R S ++ AP S GL + SG+VG+ R++ Sbjct: 553 EATRRAQSSFAWGLEPHSHGARSRGYSESVGAAPNA--SDGLAH----SGKVGVACKRNA 606 Query: 615 RKLEAG 620 +K E+G Sbjct: 607 KKAESG 612
>gi|51475776|ref|XP_295195.5|PREDICTED: similar to alpha 2 type VI collagen isoform 2C2 precursor; collagen VI, alpha-2 polypeptide; human mRNA for collagen VI alpha-2 C-terminal globular domain [Homo sapiens] Length = 697 Score = 32.0 bits (71), Expect = 4.6 Identities = 51/190 (26%), Positives = 70/190 (36%), Gaps = 30/190 (15%) Query: 391 GPQVLQLPILRCYSVSEPGEGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAFGKKLWAIA 450 G Q +Q PI G+GLP + G Q P P G + Sbjct: 439 GEQGIQGPIGPPGPQGPAGQGLPGSKGEVG---------QMGPTGPRGPVGIGVQ----G 485 Query: 451 PKG-PGLAGVPHSMPRCVQGGRAETK-EVGLPDFQRFFIP----------NLELKSSGIN 498 PKG PG G+P + G A K E GLP + P + K S N Sbjct: 486 PKGEPGSIGLPGQPGVPGEDGAAGKKGEAGLPGARGPEGPPGKGQPGPKGDEGKKGSKGN 545 Query: 499 RKQNRHPHSQHKERQRGHQHQHPAP-RSLPCLGPPSLEGEKHGPGLPSSGHEANCTRHLH 557 + Q P + + + G P S+P GPP +G++ GPG+P G + + Sbjct: 546 QGQRGLPGPEGPKGEPGIMGPFGMPGTSIP--GPPGPKGDRGGPGIP--GFKGEPGLSIR 601 Query: 558 THPGQPGARG 567 G G RG Sbjct: 602 GPKGVQGPRG 611
>gi|31083144|ref|NP_851393.1|axin 1 isoform b [Homo sapiens] gi|27881698|gb|AAH44648.1|
Axin 1, isoform b [Homo sapiens] Length = 826 Score = 32.0 bits (71), Expect = 4.6 Identities = 44/186 (23%), Positives = 69/186 (37%), Gaps = 45/186 (24%) Query: 461 HSMPRCVQGGRAETKEVGLPDFQRFFIPNLE--LKSSGINRKQNRHPHSQHKERQRGHQH 518 H PRCV G A ++ + + +++ L++ G + P H+ GH Sbjct: 446 HFPPRCVDMGCAGLRDAHEENPESILDEHVQRVLRTPG-----RQSPGPGHRSPDSGHVA 500 Query: 519 QHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEANCT-----RHLHTHPGQPGAR------- 566 + P G HG +P SG + + RH+H H AR Sbjct: 501 KMPVALGGAASG--------HGKHVPKSGAKLDAAGLHHHRHVHHHVHHSTARPKEQVEA 552 Query: 567 ------------GLSPRPECIRIFRLSGAIPTAPFIFLSRGLVNMEPASGEVGMCWGRHS 614 GL P R S ++ AP S GL + SG+VG+ R++ Sbjct: 553 EATRRAQSSFAWGLEPHSHGARSRGYSESVGAAPNA--SDGLAH----SGKVGVACKRNA 606 Query: 615 RKLEAG 620 +K E+G Sbjct: 607 KKAESG 612
>gi|37589103|gb|AAH51699.2|POU domain, class 3, transcription factor 2 [Homo sapiens] Length = 443 Score = 32.0 bits (71), Expect = 4.6 Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Query: 492 LKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGP 541 L G+ + H+ H H HQ P P P GPP G H P Sbjct: 210 LHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPP-PPQGPPGHPGAHHDP 258
>gi|7512952|pir||T17261 hypothetical protein DKFZp727I051.1 - human (fragment) gi|5911953|emb|CAB55951.1|hypothetical protein [Homo sapiens] Length = 698 Score = 32.0 bits (71), Expect = 4.6 Identities = 28/104 (26%), Positives = 34/104 (32%), Gaps = 18/104 (17%) Query: 502 NRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEANCTRHLHTHP- 560 +R H +R H H H PR LP G P SG A R HP Sbjct: 367 HRQAHPAPTPGRRSHSHSHVLPRPLPRTGTGHAAPRPPRPRATGSGQAARGGRACF-HPG 425 Query: 561 ---------------GQPGARGLSPRPECIRI-FRLSGAIPTAP 588 G+ G PRP +R+ L A+P P Sbjct: 426 LAPMALSFLPSAPAAGRTGPSACRPRPGAVRLPHPLPQALPVLP 469
>gi|7959153|dbj|BAA95971.1|KIAA1447 protein [Homo sapiens] Length = 1721 Score = 32.0 bits (71), Expect = 4.6 Identities = 44/188 (23%), Positives = 60/188 (31%), Gaps = 44/188 (23%) Query: 540 GPGLPSSGHEANCTRHLHTHPGQPGARGLSPRPECIRIFRLSGAIPTAPFIFLSRGLVNM 599 G LPS H +N PGA+ PE R F P +P GL++ Sbjct: 355 GFSLPSDVHSSNLEDPETMQTTAPGAQ-----PEPTRTFLPGEPPPCSPRSLEEPGLLS- 408 Query: 600 EPASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIKRAGSREPSDQGL 659 G R+ Q +L + PA P +A P Sbjct: 409 ---------------------GAREATQ-----DLAATPYPAERGPQGKAADPSP----- 437 Query: 660 ETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVTHAREGSQWESSSECGKGA 719 + GL+E C + A P Q S G + EG Q SS + Sbjct: 438 -------LEGLQELQCAALLEAGGPEATGQAHSTQGGAREERSREEGEQGPSSGASSQVL 490 Query: 720 ERRMYNPG 727 E+R +PG Sbjct: 491 EQRAGSPG 498
>gi|18676606|dbj|BAB84955.1|FLJ00201 protein [Homo sapiens] Length = 705 Score = 32.0 bits (71), Expect = 4.6 Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 13/126 (10%) Query: 529 LGPPSLEGEKHGPGLPSSGHEANC----TRHLHTHPGQPGARGLS--PRPECIRIFRLSG 582 +GP L G K PGLP E T PG PG+ G++ P P Sbjct: 476 IGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPG------PP 529 Query: 583 AIPTAPFIFLSRGLVNME-PASGEVGMCWGRHSRKLEAGGKRKEKQLQELAELVRSQAPA 641 P AP F G+ + P G G G+ + G+ ++ S PA Sbjct: 530 GPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPA 589 Query: 642 NSAPIK 647 + P+K Sbjct: 590 SGMPVK 595
>gi|47419936|ref|NP_003128.3|SFRS protein kinase 1 [Homo sapiens] Length = 655 Score = 31.6 bits (70), Expect = 6.0 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 615 RKLEAGGKRK----EKQLQELAELVRSQAPANSAPIKRAGSREPSDQGLETQRPFLIT-- 668 +KL+ KR+ EK++QE+ E+ + P P K+ S P ++ L+ P +T Sbjct: 269 KKLKKKQKRQAELLEKRMQEIEEMEKESGPGQKRPNKQEESESPVERPLKENPPNKMTQE 328 Query: 669 GLEES 673 LEES Sbjct: 329 KLEES 333
>gi|55749678|ref|NP_079452.3|KIAA0980 protein [Homo sapiens] gi|57284069|emb|CAI43018.1| GD:KIAA0980 [Homo sapiens] Length = 1382 Score = 31.6 bits (70), Expect = 6.0 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 31/146 (21%) Query: 593 SRGLVNMEPASGEVGMCW-----GRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIK 647 +RGL+ + P GE + W GR S + G R+ +Q Q+ ++A + AP Sbjct: 843 TRGLLPLRPGCGERPLAWLAPGDGRESEEAAGAGPRR-RQAQD------TEATQSPAPAP 895 Query: 648 RAGSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVT---HAR 704 S PS++ Q P + G +V P P S E PG ++ R Sbjct: 896 APASHGPSERWSRMQ-PCGVDG------DIVPKEPEPFGASAAGLEQPGARELPLLGTER 948 Query: 705 EGSQ-----WE----SSSECGKGAER 721 + SQ WE ++ C AER Sbjct: 949 DASQTQPRMWEPPLRPAASCRGQAER 974
>gi|37181819|gb|AAQ88713.1|VPPP1921 [Homo sapiens] gi|39930511|ref|NP_597716.1|
collagen and calcium binding EGF domains 1 [Homo sapiens] Length = 406 Score = 31.6 bits (70), Expect = 6.0 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 15/62 (24%) Query: 521 PAPRSLPC-LGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG----LSPRPECI 575 P P LP GPP G K PG P + PGQPG RG + P P+ Sbjct: 246 PGPPGLPGGQGPPGSPGPKGSPGFPG----------MPGPPGQPGPRGSMGPMGPSPDLS 295 Query: 576 RI 577 I Sbjct: 296 HI 297
>gi|18104952|ref|NP_542378.1|T-box 1 isoform C [Homo sapiens] gi|14289455|gb|AAK58955.1|
T-box 1 transcription factor C [Homo sapiens] Length = 495 Score = 31.6 bits (70), Expect = 6.0 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 15/110 (13%) Query: 488 PNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSG 547 P L L++ G + + HP+ ++PA LG S PGL G Sbjct: 398 PELRLEAPGASEPLHHHPY------------KYPAAAYDHYLGAKSRPAPYPLPGLRGHG 445 Query: 548 HEANCTRHLHTHPGQP---GARGLSPRPECIRIFRLSGAIPTAPFIFLSR 594 + + H H HP P A + ++ +GA P + + R Sbjct: 446 YHPHAHPHHHHHPVSPAAAAAAAAAAAAAAANMYSSAGAAPPGSYDYCPR 495
>gi|298642|gb|AAB25797.1|type XVI collagen alpha 1 chain; alpha 1 (XVI) [Homo sapiens] Length = 1186 Score = 31.6 bits (70), Expect = 6.0 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 8/48 (16%) Query: 521 PAPRSLPCL-GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 P P P L GPP +G+ PGLP G + +C + PG PG+ G Sbjct: 812 PGPAGPPGLMGPPGFKGKTGHPGLP--GPKGDCGK-----PGPPGSTG 852
>gi|30067|emb|CAA29075.1|unnamed protein product [Homo sapiens] Length = 944 Score = 31.6 bits (70), Expect = 6.0 Identities = 49/165 (29%), Positives = 58/165 (35%), Gaps = 42/165 (25%) Query: 407 EPG-EGLPSKLWQGGLSIKCGPRCQSSPAAKETPYAFGKKLWAIAPKGPGLAGVPHSMPR 465 EPG +G+P G+ K P P + P G K +P PG G P + R Sbjct: 265 EPGFQGMP------GVGEKGEP---GKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGR 315 Query: 466 CVQGGRAETKEVGLPDFQRFFIPNLELKSSGINRKQNRHPHSQHKERQRGHQHQHPAPRS 525 QG E E G P I L G +RG+ P PR Sbjct: 316 --QGPAGEKGEAGPPGPPGIVIGTGPLGEKG----------------ERGYPGT-PGPRG 356 Query: 526 LPCLGP---PSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 P GP P L G+ PGLP G PG PG RG Sbjct: 357 EP--GPKGFPGLPGQPGPPGLPVPGQAG--------APGFPGERG 391
>gi|105695|pir||S23810 collagen alpha 1(XVI) chain precursor - human gi|180758|gb|AAA58427.1|alpha-1 type XVI collagen gi|728997|sp|Q07092|CA1F_HUMAN
Collagen alpha 1(XVI) chain precursor Length = 1603 Score = 31.6 bits (70), Expect = 6.0 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 8/48 (16%) Query: 521 PAPRSLPCL-GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 P P P L GPP +G+ PGLP G + +C + PG PG+ G Sbjct: 1229 PGPAGPPGLMGPPGFKGKTGHPGLP--GPKGDCGK-----PGPPGSTG 1269
>gi|18641352|ref|NP_001847.2|alpha 1 type XVI collagen precursor [Homo sapiens] Length = 1603 Score = 31.6 bits (70), Expect = 6.0 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 8/48 (16%) Query: 521 PAPRSLPCL-GPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 P P P L GPP +G+ PGLP G + +C + PG PG+ G Sbjct: 1229 PGPAGPPGLMGPPGFKGKTGHPGLP--GPKGDCGK-----PGPPGSTG 1269
>gi|56208229|emb|CAI20544.1|SRPK1 [Homo sapiens] Length = 654 Score = 31.6 bits (70), Expect = 6.0 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 615 RKLEAGGKRK----EKQLQELAELVRSQAPANSAPIKRAGSREPSDQGLETQRPFLIT-- 668 +KL+ KR+ EK++QE+ E+ + P P K+ S P ++ L+ P +T Sbjct: 269 KKLKKKQKRQAELLEKRMQEIEEMEKESGPGQKRPNKQEESESPVERPLKENPPNKMTQE 328 Query: 669 GLEES 673 LEES Sbjct: 329 KLEES 333
>gi|56208230|emb|CAI20545.1|SRPK1 [Homo sapiens] Length = 654 Score = 31.6 bits (70), Expect = 6.0 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 615 RKLEAGGKRK----EKQLQELAELVRSQAPANSAPIKRAGSREPSDQGLETQRPFLIT-- 668 +KL+ KR+ EK++QE+ E+ + P P K+ S P ++ L+ P +T Sbjct: 269 KKLKKKQKRQAELLEKRMQEIEEMEKESGPGQKRPNKQEESESPVERPLKENPPNKMTQE 328 Query: 669 GLEES 673 LEES Sbjct: 329 KLEES 333
>gi|56208228|emb|CAI20543.1|SRPK1 [Homo sapiens] Length = 547 Score = 31.6 bits (70), Expect = 6.0 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 615 RKLEAGGKRK----EKQLQELAELVRSQAPANSAPIKRAGSREPSDQGLETQRPFLIT-- 668 +KL+ KR+ EK++QE+ E+ + P P K+ S P ++ L+ P +T Sbjct: 162 KKLKKKQKRQAELLEKRMQEIEEMEKESGPGQKRPNKQEESESPVERPLKENPPNKMTQE 221 Query: 669 GLEES 673 LEES Sbjct: 222 KLEES 226
>gi|29468246|gb|AAO85466.1|XTP9 [Homo sapiens] Length = 667 Score = 31.6 bits (70), Expect = 6.0 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 5/76 (6%) Query: 502 NRHPHSQHKERQRGHQHQH---PAPRSLPCLGPPSLEG-EKHGPGLPSSGHEANCTRHLH 557 ++H H+ Q HQHQH P P LP P + +K+ P L S + Sbjct: 62 HQHQHTHQHTHQHTHQHQHTFAPFPAGLPPTPPAAPPPFDKYAPKLDSPYFRHSSVSFFP 121 Query: 558 TH-PGQPGARGLSPRP 572 + P PG L P P Sbjct: 122 SFPPAIPGLPTLLPHP 137
>gi|51474423|ref|XP_371084.2|PREDICTED: KIAA1447 protein [Homo sapiens] Length = 2538 Score = 31.6 bits (70), Expect = 6.0 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 641 ANSAPIKRAGSREPSDQGLETQR--PFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTS 698 A A A + P+++G + + P + GL+E C + A P Q S G Sbjct: 1053 AREATQDLAATPYPTERGPQGKAADPSPLEGLQELQCAALLEAGGPEATGQAHSTQGGAR 1112 Query: 699 KVTHAREGSQWESSSECGKGAERRMYNPG 727 + EG Q SS + E+R +PG Sbjct: 1113 EERSREEGEQGPSSGASSQVLEQRAGSPG 1141
>gi|51471025|ref|XP_495939.1|PREDICTED: KIAA1545 protein [Homo sapiens] Length = 898 Score = 31.6 bits (70), Expect = 6.0 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 5/76 (6%) Query: 502 NRHPHSQHKERQRGHQHQH---PAPRSLPCLGPPSLEG-EKHGPGLPSSGHEANCTRHLH 557 ++H H+ Q HQHQH P P LP P + +K+ P L S + Sbjct: 341 HQHQHTHQHTHQHTHQHQHTFAPFPAGLPPTPPAAPPPFDKYAPKLDSPYFRHSSVSFFP 400 Query: 558 TH-PGQPGARGLSPRP 572 + P PG L P P Sbjct: 401 SFPPAIPGLPTLLPHP 416
>gi|14252988|emb|CAC39299.1|SRPK1a protein kinase [Homo sapiens] Length = 826 Score = 31.6 bits (70), Expect = 6.0 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 615 RKLEAGGKRK----EKQLQELAELVRSQAPANSAPIKRAGSREPSDQGLETQRPFLIT-- 668 +KL+ KR+ EK++QE+ E+ + P P K+ S P ++ L+ P +T Sbjct: 440 KKLKKKQKRQAELLEKRMQEIEEMEKESGPGQKRPNKQEESESPVERPLKENPPNKMTQE 499 Query: 669 GLEES 673 LEES Sbjct: 500 KLEES 504
>gi|23468345|gb|AAH38292.1|SFRS protein kinase 1 [Homo sapiens] Length = 655 Score = 31.6 bits (70), Expect = 6.0 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 615 RKLEAGGKRK----EKQLQELAELVRSQAPANSAPIKRAGSREPSDQGLETQRPFLIT-- 668 +KL+ KR+ EK++QE+ E+ + P P K+ S P ++ L+ P +T Sbjct: 269 KKLKKKQKRQAELLEKRMQEIEEMEKESGPGQKRPNKQEESESPVERPLKENPPNKMTQE 328 Query: 669 GLEES 673 LEES Sbjct: 329 KLEES 333
>gi|630737|pir||S45337 serine protein kinase SRPK1 - human gi|507213|gb|AAA20530.1| serine kinase gi|743795|prf||2013348A Ser kinase SRPK1 Length = 655 Score = 31.6 bits (70), Expect = 6.0 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 615 RKLEAGGKRK----EKQLQELAELVRSQAPANSAPIKRAGSREPSDQGLETQRPFLIT-- 668 +KL+ KR+ EK++QE+ E+ + P P K+ S P ++ L+ P +T Sbjct: 269 KKLKKKQKRQAELLEKRMQEIEEMEKESGPGQKRPNKQEESESPVERPLKENPPNKMTQE 328 Query: 669 GLEES 673 LEES Sbjct: 329 KLEES 333
>gi|47077249|dbj|BAD18544.1|unnamed protein product [Homo sapiens] Length = 446 Score = 31.6 bits (70), Expect = 6.0 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 8/81 (9%) Query: 495 SGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEANCTR 554 S N +R P S GH P+P+ P P E PG P G +A + Sbjct: 214 SANNNSGSRCPESWDPVSAGGHAEGCPSPKQTPRASP-----EPGYPGEPLLGLQAASAQ 268 Query: 555 HLHTHPGQP---GARGLSPRP 572 PG P A+GL+P P Sbjct: 269 EPGCCPGLPHLCSAQGLAPAP 289
>gi|28302161|gb|AAH46645.1|CCBE1 protein [Homo sapiens] Length = 215 Score = 31.6 bits (70), Expect = 6.0 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 15/62 (24%) Query: 521 PAPRSLPC-LGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG----LSPRPECI 575 P P LP GPP G K PG P + PGQPG RG + P P+ Sbjct: 55 PGPPGLPGGQGPPGSPGPKGSPGFPG----------MPGPPGQPGPRGSMGPMGPSPDLS 104 Query: 576 RI 577 I Sbjct: 105 HI 106
>gi|18916890|dbj|BAB85569.1|KIAA1983 protein [Homo sapiens] Length = 418 Score = 31.6 bits (70), Expect = 6.0 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 15/62 (24%) Query: 521 PAPRSLPC-LGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG----LSPRPECI 575 P P LP GPP G K PG P + PGQPG RG + P P+ Sbjct: 258 PGPPGLPGGQGPPGSPGPKGSPGFPG----------MPGPPGQPGPRGSMGPMGPSPDLS 307 Query: 576 RI 577 I Sbjct: 308 HI 309
>gi|4589604|dbj|BAA76824.1|KIAA0980 protein [Homo sapiens] Length = 1406 Score = 31.6 bits (70), Expect = 6.0 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 31/146 (21%) Query: 593 SRGLVNMEPASGEVGMCW-----GRHSRKLEAGGKRKEKQLQELAELVRSQAPANSAPIK 647 +RGL+ + P GE + W GR S + G R+ +Q Q+ ++A + AP Sbjct: 867 TRGLLPLRPGCGERPLAWLAPGDGRESEEAAGAGPRR-RQAQD------TEATQSPAPAP 919 Query: 648 RAGSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVT---HAR 704 S PS++ Q P + G +V P P S E PG ++ R Sbjct: 920 APASHGPSERWSRMQ-PCGVDG------DIVPKEPEPFGASAAGLEQPGARELPLLGTER 972 Query: 705 EGSQ-----WE----SSSECGKGAER 721 + SQ WE ++ C AER Sbjct: 973 DASQTQPRMWEPPLRPAASCRGQAER 998
>gi|20521936|dbj|BAB13371.2|KIAA1545 protein [Homo sapiens] Length = 968 Score = 31.6 bits (70), Expect = 6.0 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 5/76 (6%) Query: 502 NRHPHSQHKERQRGHQHQH---PAPRSLPCLGPPSLEG-EKHGPGLPSSGHEANCTRHLH 557 ++H H+ Q HQHQH P P LP P + +K+ P L S + Sbjct: 363 HQHQHTHQHTHQHTHQHQHTFAPFPAGLPPTPPAAPPPFDKYAPKLDSPYFRHSSVSFFP 422 Query: 558 TH-PGQPGARGLSPRP 572 + P PG L P P Sbjct: 423 SFPPAIPGLPTLLPHP 438
>gi|16357501|ref|NP_001838.1|type IV alpha 6 collagen isoform A precursor [Homo sapiens] gi|15991848|gb|AAA19569.2|
A type IV collagen [Homo sapiens] gi|1360675|pir||CGHU6B collagen alpha 6(IV) chain precursor - human Length = 1691 Score = 31.2 bits (69), Expect = 7.8 Identities = 55/214 (25%), Positives = 78/214 (36%), Gaps = 47/214 (21%) Query: 383 MQGQALNAGPQVLQLPILRCYSVSEPGE-GLPSKLWQGGLSIKCGPRCQSSPAAKETPYA 441 +QG A G + LP L +PG GL + + G + GP SS Sbjct: 1236 LQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPG 1295 Query: 442 FGKKLWAIAPKG----PGLAGVPHSMPRCVQGGRAETK------EVGLPDFQRFFIPNLE 491 F PKG PG +G+P + ++G R E +VG P F P ++ Sbjct: 1296 FPGIPGPKGPKGDQGIPGFSGLPGELG--LKGMRGEPGFMGTPGKVGPPGDPGF--PGMK 1351 Query: 492 LK-----SSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCL-------------GPPS 533 K SSG+ + P ++ + P P LP + GP Sbjct: 1352 GKAGPRGSSGLQGDPGQTPTAEAVQVP-------PGPLGLPGIDGIPGLTGDPGAQGPVG 1404 Query: 534 LEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 L+G K PG+P + PG PGA G Sbjct: 1405 LQGSKGLPGIPGKDGPSGL-------PGPPGALG 1431
>gi|2808423|emb|CAA15622.1|spinocerebellar ataxia 1 (olivopontocerebellar ataxia 1, autosomal dominant, ataxin 1) [Homo sapiens] gi|51479158|ref|NP_000323.2|
ataxin 1 [Homo sapiens] Length = 815 Score = 31.2 bits (69), Expect = 7.8 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Query: 512 RQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 ++R ++ P R +P S E+ P LPS H T L PG PG RG Sbjct: 5 QERSNECLPPKKREIPAT---SRSSEEKAPTLPSDNHRVEGTAWL---PGNPGGRG 54
>gi|57284022|emb|CAI43038.1| collagen, type IV, alpha 5 (Alport syndrome) [Homo sapiens] gi|57208413|emb|CAB90289.2|collagen, type IV, alpha 5 (Alport syndrome) [Homo sapiens] gi|57208282|emb|CAA22267.2|
collagen, type IV, alpha 5 (Alport syndrome) [Homo sapiens] gi|4502955|ref|NP_000486.1|
alpha 5 type IV collagen isoform 1, precursor [Homo sapiens] gi|463430|gb|AAC27816.1|
type IV collagen alpha 5 chain [Homo sapiens] gi|461675|sp|P29400|CA54_HUMAN
Collagen alpha 5(IV) chain precursor Length = 1685 Score = 31.2 bits (69), Expect = 7.8 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Query: 520 HPAPRSLPCLGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGL 568 +P P+ P G P L G + PGLP +G + +PGQPG GL Sbjct: 1253 NPGPQGPP--GRPGLPGPEGPPGLPGNGG----IKGEKGNPGQPGLPGL 1295
>gi|180825|gb|AAA52045.1|collagen type IV alpha 5 chain Length = 772 Score = 31.2 bits (69), Expect = 7.8 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Query: 520 HPAPRSLPCLGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGL 568 +P P+ P G P L G + PGLP +G + +PGQPG GL Sbjct: 340 NPGPQGPP--GRPGLPGPEGPPGLPGNGG----IKGEKGNPGQPGLPGL 382
>gi|1082237|pir||S46268 ataxin-1 - human gi|529662|emb|CAA55793.1|ataxin-1 [Homo sapiens] gi|1710863|sp|P54253|ATX1_HUMAN
Ataxin-1 (Spinocerebellar ataxia type 1 protein) Length = 816 Score = 31.2 bits (69), Expect = 7.8 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Query: 512 RQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 ++R ++ P R +P S E+ P LPS H T L PG PG RG Sbjct: 5 QERSNECLPPKKREIPAT---SRSSEEKAPTLPSDNHRVEGTAWL---PGNPGGRG 54
>gi|35250686|ref|NP_079366.2|ubiquitin specific protease 36 [Homo sapiens] gi|37999907|sp|Q9P275|UBP36_HUMAN
Ubiquitin carboxyl-terminal hydrolase 36 (Ubiquitin thiolesterase 36) (Ubiquitin-specific processing protease 36) (Deubiquitinating enzyme 36) Length = 1121 Score = 31.2 bits (69), Expect = 7.8 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 649 AGSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVTHAREGSQ 708 +GS P T P T L++ G ++ + AP H + PGTS +R GSQ Sbjct: 511 SGSPSPKLSQTPTHMP---TILDDPGKKVKKPAPPQHFSPRTAQGLPGTSNSNSSRSGSQ 567 Query: 709 WESS 712 + S Sbjct: 568 RQGS 571
>gi|40255168|ref|NP_775756.2|chromosome 20 open reading frame 17 [Homo sapiens] gi|34364882|emb|CAE45871.1|
hypothetical protein [Homo sapiens] Length = 1034 Score = 31.2 bits (69), Expect = 7.8 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 13/103 (12%) Query: 619 AGGKRKEKQLQELAELVRSQAPANSAPIKR--AGSREPSDQGLETQRPFLITGLEESGCQ 676 A G +E+QL+E E+ + +S + + G+ +D+ LET G E+ GC Sbjct: 12 AAGYAQEEQLKEEEEIKEEEEEEDSGSVAQLQGGNDTGTDEELET-------GPEQKGCF 64 Query: 677 LVRVAPSPHLLSQRCSESPGTSKVTHAREGSQWESSSECGKGA 719 + +P HL +Q ++ S ++ A + + S CG+ A Sbjct: 65 SYQNSPGSHLSNQ---DAENESLLSDASDQVS-DIKSVCGRDA 103
>gi|38348432|ref|NP_940983.1|zinc finger CCCH type domain containing 6 [Homo sapiens] gi|34534836|dbj|BAC87128.1|
unnamed protein product [Homo sapiens] Length = 938 Score = 31.2 bits (69), Expect = 7.8 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 529 LGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPG-----QPGARGLSPRPECIR 576 L PPS+ G H PG P GH R H PG PG L+ E ++ Sbjct: 344 LTPPSMGGAYHSPGFP--GHVMKVPRENHCSPGSSYQQSPGEMQLNTNYESLQ 394
>gi|57284018|emb|CAI43140.1| collagen, type IV, alpha 6 [Homo sapiens] gi|57208608|emb|CAI40758.1| collagen, type IV, alpha 6 [Homo sapiens] gi|57208541|emb|CAI42995.1| collagen, type IV, alpha 6 [Homo sapiens] gi|57208281|emb|CAI42047.1|collagen, type IV, alpha 6 [Homo sapiens] Length = 1691 Score = 31.2 bits (69), Expect = 7.8 Identities = 55/214 (25%), Positives = 78/214 (36%), Gaps = 47/214 (21%) Query: 383 MQGQALNAGPQVLQLPILRCYSVSEPGE-GLPSKLWQGGLSIKCGPRCQSSPAAKETPYA 441 +QG A G + LP L +PG GL + + G + GP SS Sbjct: 1236 LQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPG 1295 Query: 442 FGKKLWAIAPKG----PGLAGVPHSMPRCVQGGRAETK------EVGLPDFQRFFIPNLE 491 F PKG PG +G+P + ++G R E +VG P F P ++ Sbjct: 1296 FPGIPGPKGPKGDQGIPGFSGLPGELG--LKGMRGEPGFMGTPGKVGPPGDPGF--PGMK 1351 Query: 492 LK-----SSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCL-------------GPPS 533 K SSG+ + P ++ + P P LP + GP Sbjct: 1352 GKAGPRGSSGLQGDPGQTPTAEAVQVP-------PGPLGLPGIDGIPGLTGDPGAQGPVG 1404 Query: 534 LEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 L+G K PG+P + PG PGA G Sbjct: 1405 LQGSKGLPGIPGKDGPSGL-------PGPPGALG 1431
>gi|57284017|emb|CAI43139.1|collagen, type IV, alpha 6 [Homo sapiens] gi|57208606|emb|CAI40756.1| collagen, type IV, alpha 6 [Homo sapiens] gi|57208539|emb|CAI42993.1| collagen, type IV, alpha 6 [Homo sapiens] gi|57208279|emb|CAI42045.1|
collagen, type IV, alpha 6 [Homo sapiens] gi|16357503|ref|NP_378667.1|
type IV alpha 6 collagen isoform B precursor [Homo sapiens] Length = 1690 Score = 31.2 bits (69), Expect = 7.8 Identities = 55/214 (25%), Positives = 78/214 (36%), Gaps = 47/214 (21%) Query: 383 MQGQALNAGPQVLQLPILRCYSVSEPGE-GLPSKLWQGGLSIKCGPRCQSSPAAKETPYA 441 +QG A G + LP L +PG GL + + G + GP SS Sbjct: 1235 LQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPG 1294 Query: 442 FGKKLWAIAPKG----PGLAGVPHSMPRCVQGGRAETK------EVGLPDFQRFFIPNLE 491 F PKG PG +G+P + ++G R E +VG P F P ++ Sbjct: 1295 FPGIPGPKGPKGDQGIPGFSGLPGELG--LKGMRGEPGFMGTPGKVGPPGDPGF--PGMK 1350 Query: 492 LK-----SSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCL-------------GPPS 533 K SSG+ + P ++ + P P LP + GP Sbjct: 1351 GKAGPRGSSGLQGDPGQTPTAEAVQVP-------PGPLGLPGIDGIPGLTGDPGAQGPVG 1403 Query: 534 LEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 L+G K PG+P + PG PGA G Sbjct: 1404 LQGSKGLPGIPGKDGPSGL-------PGPPGALG 1430
>gi|7023072|dbj|BAA91825.1|unnamed protein product [Homo sapiens] Length = 954 Score = 31.2 bits (69), Expect = 7.8 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 649 AGSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVTHAREGSQ 708 +GS P T P T L++ G ++ + AP H + PGTS +R GSQ Sbjct: 511 SGSPSPKLSQTPTHMP---TILDDPGKKVKKPAPPQHFSPRTAQGLPGTSNSNSSRSGSQ 567 Query: 709 WESS 712 + S Sbjct: 568 RQGS 571
>gi|21749523|dbj|BAC03610.1|unnamed protein product [Homo sapiens] Length = 1034 Score = 31.2 bits (69), Expect = 7.8 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 13/103 (12%) Query: 619 AGGKRKEKQLQELAELVRSQAPANSAPIKR--AGSREPSDQGLETQRPFLITGLEESGCQ 676 A G +E+QL+E E+ + +S + + G+ +D+ LET G E+ GC Sbjct: 12 AAGYAQEEQLKEEEEIKEEEEEEDSGSVAQLQGGNDTGTDEELET-------GPEQKGCF 64 Query: 677 LVRVAPSPHLLSQRCSESPGTSKVTHAREGSQWESSSECGKGA 719 + +P HL +Q ++ S ++ A + + S CG+ A Sbjct: 65 SYQNSPGSHLSNQ---DAENESLLSDASDQVS-DIKSVCGRDA 103
>gi|37360932|dbj|BAC98375.1|KIAA2035 protein [Homo sapiens] Length = 1135 Score = 31.2 bits (69), Expect = 7.8 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 529 LGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPG-----QPGARGLSPRPECIR 576 L PPS+ G H PG P GH R H PG PG L+ E ++ Sbjct: 488 LTPPSMGGAYHSPGFP--GHVMKVPRENHCSPGSSYQQSPGEMQLNTNYESLQ 538
>gi|59939295|gb|AAX12417.1| ifapsoriasin [Homo sapiens] Length = 2391 Score = 31.2 bits (69), Expect = 7.8 Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 13/64 (20%) Query: 504 HPHSQHKERQRGHQHQHPAPRSLPCLGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQP 563 H HS H Q G QH S E+HG + G + TRH H+ GQ Sbjct: 2044 HTHSGHAHGQAGSQHGESG----------SSVHERHG---TTHGQTGDTTRHAHSGHGQS 2090 Query: 564 GARG 567 RG Sbjct: 2091 TQRG 2094
>gi|47940448|gb|AAH71582.1|USP36 protein [Homo sapiens] Length = 1123 Score = 31.2 bits (69), Expect = 7.8 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 649 AGSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVTHAREGSQ 708 +GS P T P T L++ G ++ + AP H + PGTS +R GSQ Sbjct: 511 SGSPSPKLSQTPTHMP---TILDDPGKKVKKPAPPQHFSPRTAQGLPGTSNSNSSRSGSQ 567 Query: 709 WESS 712 + S Sbjct: 568 RQGS 571
>gi|2252820|gb|AAC51624.1|axin [Homo sapiens] Length = 900 Score = 31.2 bits (69), Expect = 7.8 Identities = 42/146 (28%), Positives = 56/146 (38%), Gaps = 38/146 (26%) Query: 506 HSQHKERQRGHQHQHPAPRSLPCLG-----PPSLEGEK--HGPGLPSSGHEANCT----- 553 H Q R G Q P RS P G P +L G HG +P SG + + Sbjct: 512 HVQRVLRTTGRQSPGPGHRS-PDSGHVAKMPVALGGAASGHGKHVPKSGAKLDAAGLHHH 570 Query: 554 RHLHTHPGQPGAR-------------------GLSPRPECIRIFRLSGAIPTAPFIFLSR 594 RH+H H AR GL P R S ++ AP S Sbjct: 571 RHVHHHVHHSTARPKEQVEAEATRRAQSSFAWGLEPHSHGARSRGYSESVGAAPNA--SD 628 Query: 595 GLVNMEPASGEVGMCWGRHSRKLEAG 620 GL + SG+VG+ R+++K E+G Sbjct: 629 GLAH----SGKVGVACKRNAKKAESG 650
>gi|21739296|emb|CAD38695.1|hypothetical protein [Homo sapiens] Length = 630 Score = 31.2 bits (69), Expect = 7.8 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 649 AGSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVTHAREGSQ 708 +GS P T P T L++ G ++ + AP H + PGTS +R GSQ Sbjct: 18 SGSPSPKLSQTPTHMP---TILDDPGKKVKKPAPPQHFSPRTAQGLPGTSNSNSSRSGSQ 74 Query: 709 WESS 712 + S Sbjct: 75 RQGS 78
>gi|1850097|dbj|BAA09791.1|a6(IV) collagen [Homo sapiens] Length = 1600 Score = 31.2 bits (69), Expect = 7.8 Identities = 55/214 (25%), Positives = 78/214 (36%), Gaps = 47/214 (21%) Query: 383 MQGQALNAGPQVLQLPILRCYSVSEPGE-GLPSKLWQGGLSIKCGPRCQSSPAAKETPYA 441 +QG A G + LP L +PG GL + + G + GP SS Sbjct: 1231 LQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPG 1290 Query: 442 FGKKLWAIAPKG----PGLAGVPHSMPRCVQGGRAETK------EVGLPDFQRFFIPNLE 491 F PKG PG +G+P + ++G R E +VG P F P ++ Sbjct: 1291 FPGIPGPKGPKGDQGIPGFSGLPGELG--LKGMRGEPGFMGTPGKVGPPGDPGF--PGMK 1346 Query: 492 LK-----SSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCL-------------GPPS 533 K SSG+ + P ++ + P P LP + GP Sbjct: 1347 GKAGARGSSGLQGDPGQTPTAEAVQVP-------PGPLGLPGIDGIPGLTGDPGAQGPVG 1399 Query: 534 LEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 L+G K PG+P + PG PGA G Sbjct: 1400 LQGSKGLPGIPGKDGPSGL-------PGPPGALG 1426
>gi|47117369|sp|P61129|ZNCC6_HUMAN Zinc finger CCCH type domain containing protein 6 Length = 1189 Score = 31.2 bits (69), Expect = 7.8 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 529 LGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPG-----QPGARGLSPRPECIR 576 L PPS+ G H PG P GH R H PG PG L+ E ++ Sbjct: 542 LTPPSMGGAYHSPGFP--GHVMKVPRENHCSPGSSYQQSPGEMQLNTNYESLQ 592
>gi|47077349|dbj|BAD18563.1|unnamed protein product [Homo sapiens] Length = 892 Score = 31.2 bits (69), Expect = 7.8 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 529 LGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPG-----QPGARGLSPRPECIR 576 L PPS+ G H PG P GH R H PG PG L+ E ++ Sbjct: 520 LTPPSMGGAYHSPGFP--GHVMKVPRENHCSPGSSYQQSPGEMQLNTNYESLQ 570
>gi|1674441|gb|AAB19039.1|collagen type IV a6 chain [Homo sapiens] Length = 1690 Score = 31.2 bits (69), Expect = 7.8 Identities = 55/214 (25%), Positives = 78/214 (36%), Gaps = 47/214 (21%) Query: 383 MQGQALNAGPQVLQLPILRCYSVSEPGE-GLPSKLWQGGLSIKCGPRCQSSPAAKETPYA 441 +QG A G + LP L +PG GL + + G + GP SS Sbjct: 1235 LQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPG 1294 Query: 442 FGKKLWAIAPKG----PGLAGVPHSMPRCVQGGRAETK------EVGLPDFQRFFIPNLE 491 F PKG PG +G+P + ++G R E +VG P F P ++ Sbjct: 1295 FPGIPGPKGPKGDQGIPGFSGLPGELG--LKGMRGEPGFMGTPGKVGPPGDPGF--PGMK 1350 Query: 492 LK-----SSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCL-------------GPPS 533 K SSG+ + P ++ + P P LP + GP Sbjct: 1351 GKAGPRGSSGLQGHPGQTPTAEAVQVP-------PGPLGLPGIDGIPGLTGDPGAQGPVG 1403 Query: 534 LEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 L+G K PG+P + PG PGA G Sbjct: 1404 LQGSKGLPGIPGKDGPSGL-------PGPPGALG 1430
>gi|1674440|gb|AAB19038.1|collagen type IV a6 chain [Homo sapiens] Length = 1691 Score = 31.2 bits (69), Expect = 7.8 Identities = 55/214 (25%), Positives = 78/214 (36%), Gaps = 47/214 (21%) Query: 383 MQGQALNAGPQVLQLPILRCYSVSEPGE-GLPSKLWQGGLSIKCGPRCQSSPAAKETPYA 441 +QG A G + LP L +PG GL + + G + GP SS Sbjct: 1236 LQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPG 1295 Query: 442 FGKKLWAIAPKG----PGLAGVPHSMPRCVQGGRAETK------EVGLPDFQRFFIPNLE 491 F PKG PG +G+P + ++G R E +VG P F P ++ Sbjct: 1296 FPGIPGPKGPKGDQGIPGFSGLPGELG--LKGMRGEPGFMGTPGKVGPPGDPGF--PGMK 1351 Query: 492 LK-----SSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCL-------------GPPS 533 K SSG+ + P ++ + P P LP + GP Sbjct: 1352 GKAGPRGSSGLQGHPGQTPTAEAVQVP-------PGPLGLPGIDGIPGLTGDPGAQGPVG 1404 Query: 534 LEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 L+G K PG+P + PG PGA G Sbjct: 1405 LQGSKGLPGIPGKDGPSGL-------PGPPGALG 1431
>gi|1314210|gb|AAA99480.1|alpha-5 type IV collagen Length = 1604 Score = 31.2 bits (69), Expect = 7.8 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Query: 520 HPAPRSLPCLGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGL 568 +P P+ P G P L G + PGLP +G + +PGQPG GL Sbjct: 1172 NPGPQGPP--GRPGLPGPEGPPGLPGNGG----IKGEKGNPGQPGLPGL 1214
>gi|28202250|sp|Q14031|CO4A6_HUMANCollagen alpha 6(IV) chain precursor Length = 1691 Score = 31.2 bits (69), Expect = 7.8 Identities = 55/214 (25%), Positives = 78/214 (36%), Gaps = 47/214 (21%) Query: 383 MQGQALNAGPQVLQLPILRCYSVSEPGE-GLPSKLWQGGLSIKCGPRCQSSPAAKETPYA 441 +QG A G + LP L +PG GL + + G + GP SS Sbjct: 1236 LQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPG 1295 Query: 442 FGKKLWAIAPKG----PGLAGVPHSMPRCVQGGRAETK------EVGLPDFQRFFIPNLE 491 F PKG PG +G+P + ++G R E +VG P F P ++ Sbjct: 1296 FPGIPGPKGPKGDQGIPGFSGLPGELG--LKGMRGEPGFMGTPGKVGPPGDPGF--PGMK 1351 Query: 492 LK-----SSGINRKQNRHPHSQHKERQRGHQHQHPAPRSLPCL-------------GPPS 533 K SSG+ + P ++ + P P LP + GP Sbjct: 1352 GKAGPRGSSGLQGDPGQTPTAEAVQVP-------PGPLGLPGIDGIPGLTGDPGAQGPVG 1404 Query: 534 LEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARG 567 L+G K PG+P + PG PGA G Sbjct: 1405 LQGSKGLPGIPGKDGPSGL-------PGPPGALG 1431
>gi|177924|gb|AAA51558.1|alpha-5 type IV collagen Length = 762 Score = 31.2 bits (69), Expect = 7.8 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Query: 520 HPAPRSLPCLGPPSLEGEKHGPGLPSSGHEANCTRHLHTHPGQPGARGL 568 +P P+ P G P L G + PGLP +G + +PGQPG GL Sbjct: 330 NPGPQGPP--GRPGLPGPEGPPGLPGNGG----IKGEKGNPGQPGLPGL 372
>gi|7959165|dbj|BAA95977.1|KIAA1453 protein [Homo sapiens] Length = 1123 Score = 31.2 bits (69), Expect = 7.8 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 649 AGSREPSDQGLETQRPFLITGLEESGCQLVRVAPSPHLLSQRCSESPGTSKVTHAREGSQ 708 +GS P T P T L++ G ++ + AP H + PGTS +R GSQ Sbjct: 513 SGSPSPKLSQTPTHMP---TILDDPGKKVKKPAPPQHFSPRTAQGLPGTSNSNSSRSGSQ 569 Query: 709 WESS 712 + S Sbjct: 570 RQGS 573
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Mar 15, 2005 10:11 AM Number of letters in database: 802,797,248 Number of sequences in database: 2,367,365 Lambda K H 0.317 0.135 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,546,539 Number of Sequences: 2367365 Number of extensions: 832865 Number of successful extensions: 2637 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 54 Number of HSP's that attempted gapping in prelim test: 2474 Number of HSP's gapped (non-prelim): 262 length of query: 730 length of database: 46,038,991 effective HSP length: 115 effective length of query: 615 effective length of database: 31,072,776 effective search space: 19109757240 effective search space used: 19109757240 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 69 (31.2 bits)
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Format | |||
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Show | Graphical OverviewLinkoutSequence RetrievalNCBI-gi in format | ||
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Use new formatter | Masking Character Masking Color | ||
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Number of: | Descriptions Alignments | ||
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Alignment view | |||
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Format for PSI-BLAST | with inclusion threshold: | ||
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Limit results by entrez query | or select from: | ||
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Expect value range: | |||
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