BLASTP 2.2.8 [Jan-05-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1079603836-21770-181195986661.BLASTQ3 Query= GENSCAN_protD1.fa (1406 letters) Database: Non-redundant SwissProt sequences 145,815 sequences; 53,526,777 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
RID: 1079603836-21770-181195986661.BLASTQ3
Query= GENSCAN_protD1.fa (1406 letters)
Database: Non-redundant SwissProt sequences 145,815 sequences; 53,526,777 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Score E Sequences producing significant alignments: (bits) Value gi|6686045|sp|O94759|TRL2_HUMAN Long transient receptor pot... 578 e-165 gi|2498939|sp|Q13103|SP24_HUMAN Secreted phosphoprotein 24 ... 162 6e-40 gi|20537335|sp|Q9HCF6|TRL3_HUMAN Long transient receptor po... 80 4e-15 gi|10720321|sp|Q9UL62|TRP5_HUMAN Short transient receptor p... 42 0.001 gi|12643721|sp|Q13507|TRP3_HUMAN Short transient receptor p... 38 0.020 gi|18202960|sp|Q9HCX4|TRP7_HUMAN Short transient receptor p... 38 0.027 gi|6686048|sp|Q9Y210|TRP6_HUMAN Short transient receptor po... 37 0.042 gi|13633994|sp|Q9UBN4|TRP4_HUMAN Short transient receptor p... 36 0.075 gi|1351302|sp|P48995|TRP1_HUMAN Short transient receptor po... 33 0.65 gi|24636282|sp|Q9H427|CIWF_HUMAN Potassium channel subfamil... 30 4.8 gi|34305677|sp|P03989|1B27_HUMAN HLA class I histocompatibi... 30 5.9 gi|23396581|sp|Q96DT5|DYHB_HUMAN Ciliary dynein heavy chain... 29 8.5 Alignments
Score E Sequences producing significant alignments: (bits) Value gi|6686045|sp|O94759|TRL2_HUMAN Long transient receptor pot... 578 e-165 gi|2498939|sp|Q13103|SP24_HUMAN Secreted phosphoprotein 24 ... 162 6e-40 gi|20537335|sp|Q9HCF6|TRL3_HUMAN Long transient receptor po... 80 4e-15 gi|10720321|sp|Q9UL62|TRP5_HUMAN Short transient receptor p... 42 0.001 gi|12643721|sp|Q13507|TRP3_HUMAN Short transient receptor p... 38 0.020 gi|18202960|sp|Q9HCX4|TRP7_HUMAN Short transient receptor p... 38 0.027 gi|6686048|sp|Q9Y210|TRP6_HUMAN Short transient receptor po... 37 0.042 gi|13633994|sp|Q9UBN4|TRP4_HUMAN Short transient receptor p... 36 0.075 gi|1351302|sp|P48995|TRP1_HUMAN Short transient receptor po... 33 0.65 gi|24636282|sp|Q9H427|CIWF_HUMAN Potassium channel subfamil... 30 4.8 gi|34305677|sp|P03989|1B27_HUMAN HLA class I histocompatibi... 30 5.9 gi|23396581|sp|Q96DT5|DYHB_HUMAN Ciliary dynein heavy chain... 29 8.5
>gi|6686045|sp|O94759|TRL2_HUMAN Long transient receptor potential channel 2 (LTrpC2) (Transient receptor potential channel 7) (TrpC7) Length = 1503 Score = 578 bits (1491), Expect = e-165 Identities = 329/821 (40%), Positives = 476/821 (57%), Gaps = 79/821 (9%) Query: 78 LVNFIQANFKKRECVFFTKDSK---ATENVCKCGYAQSQHMEGT---QINQSEKWNYKKH 131 L ++I N KK+ECV+F + SK A + VC+CGY QH+E Q +W+ KKH Sbjct: 59 LSSWIPENIKKKECVYFVESSKLSDAGKVVCQCGYTHEQHLEEATKPHTFQGTQWDPKKH 118 Query: 132 TKEFPTDAFGDIQFETLGKK-GKYIRLSCDTDAEILYELLTQHWHLKTPNLVISVTGGAK 190 +E PTDAFGDI F L +K KY+R+S DT + ++Y L+TQHW L PNL+ISVTGGAK Sbjct: 119 VQEMPTDAFGDIVFTGLSQKVKKYVRVSQDTPSSVIYHLMTQHWGLDVPNLLISVTGGAK 178 Query: 191 NFALKPRMRKIFSR-LIYIAQSKGAWILTGGTHYGLMKYIGEVVRDNTISRSSEE-NIVA 248 NF +KPR++ IF R L+ +AQ+ GAWI+TGG+H G+MK +GE VRD ++S S +E ++ Sbjct: 179 NFNMKPRLKSIFRRGLVKVAQTTGAWIITGGSHTGVMKQVGEAVRDFSLSSSYKEGELIT 238 Query: 249 IGIAAWGMVSNRDTLIRNCDAEGYFLAQYLMDDFTRDPLYILDNNHTHLLLVDNGCHGHP 308 IG+A WG V R+ LI G F A+Y++D+ + L LD+NH+H +LVD+G HG Sbjct: 239 IGVATWGTVHRREGLIH---PTGSFPAEYILDEDGQGNLTCLDSNHSHFILVDDGTHGQY 295 Query: 309 TVEAKLRNQLEKYISERTIQDSNYGGKIPIVCFAQGGGKETLKAINTSIKNKIPCVVVEG 368 VE LR +LEK+ISE+T + KIPIVC GG TL I+ + N PCVVVEG Sbjct: 296 GVEIPLRTRLEKFISEQTKERGGVAIKIPIVCVVLEGGPGTLHTIDNATTNGTPCVVVEG 355 Query: 369 SGQIADVIASLVEVE-DALTSSAVKEKLVRFLPRTVSRLPEEETESWIKWLKEILECSHL 427 SG++ADVIA + + +T S +++KL F E W K +++I+ L Sbjct: 356 SGRVADVIAQVANLPVSDITISLIQQKLSVFFQEMFETFTESRIVEWTKKIQDIVRRRQL 415 Query: 428 LTVIKMEEAGDEIVSNAISYALYKAFSTSEQ-DKDNWNGQLKLLLEWNQLDLANDEIFTN 486 LTV + + G + V AI AL KA + + +NW+ QLKL + WN++D+A EIF + Sbjct: 416 LTVFREGKDGQQDVDVAILQALLKASRSQDHFGHENWDHQLKLAVAWNRVDIARSEIFMD 475 Query: 487 DRRWESADLQEVMFTALIKDRPKFVRLFLENGLNLRKFLTHDVLTELFSN-HFSTLVYRN 545 + +W+ +DL M ALI ++P+FV+LFLENG+ L++F+T D L L+ N S L + Sbjct: 476 EWQWKPSDLHPTMTAALISNKPEFVKLFLENGVQLKEFVTWDTLLYLYENLDPSCLFHSK 535 Query: 546 LQ--IAKNSYNDA------------LLTFVWKLVANFRRGFRKEDR-NGR-------DEM 583 LQ + ++ A + + +L+ +F + R N R + Sbjct: 536 LQKVLVEDPERPACAPAAPRLQMHHVAQVLRELLGDFTQPLYPRPRHNDRLRLLLPVPHV 595 Query: 584 DIELHDVS------------PITRHPLQALFIWAILQNKKELSKVIWEQTRGCTLAALGA 631 + + VS T P++ L IWAI+QN++EL+ +IW Q++ C AAL Sbjct: 596 KLNVQGVSLRSLYKRSSGHVTFTMDPIRDLLIWAIVQNRRELAGIIWAQSQDCIAAALAC 655 Query: 632 SKLLKTLAKVKNDINAAGESEELANEYETRAVGESTVWNAVVGADLPCGTDIASGTHRPD 691 SK+LK L+K + D +++ E LA EYE RA+G Sbjct: 656 SKILKELSKEEEDTDSSEEMLALAEEYEHRAIG--------------------------- 688 Query: 692 GGELFTECYSSDEDLAEQLLVYSCEAWGGSNCLELAVEATDQHFIAQPGVQNFLSKQWYG 751 +FTECY DE+ A++LL EAWG + CL+LA+EA D F++ G+Q FL+K W+G Sbjct: 689 ---VFTECYRKDEERAQKLLTRVSEAWGKTTCLQLALEAKDMKFVSHGGIQAFLTKVWWG 745 Query: 752 EISRDTKNWKIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVF 811 ++S D W++ LC+ PL+ G +SFR+K + AFFT+P VVF N++ Sbjct: 746 QLSVDNGLWRVTLCMLAFPLLLTGLISFREKRLQDVGTPAARARAFFTAPVVVFHLNILS 805 Query: 812 YIAFLLLFAYVLLMDFHSVPHPPELVLYSLVFVLFCDEVRQ 852 Y AFL LFAYVL++DF VP E +Y +F L C+E+RQ Sbjct: 806 YFAFLCLFAYVLMVDFQPVPSWCECAIYLWLFSLVCEEMRQ 846
Score = 121 bits (303), Expect = 2e-27 Identities = 87/230 (37%), Positives = 131/230 (56%), Gaps = 17/230 (7%) Query: 807 WNVVFYIAFLLLFAYVLLMDFHSVPHPPELVLYSLVFVLFCDE------VRQAPEEQMVV 860 WN + A LL A + + +P ++L SL F+LFC + + ++++ Sbjct: 868 WNKLDVGAILLFVAGLTCRLIPATLYPGRVIL-SLDFILFCLRLMHIFTISKTLGPKIII 926 Query: 861 ADRCV------LLPVPLCGVDGGLCVARQGILRQNEQRWRWIFRSVIYEPYLAMFGQVPS 914 R + L + + V G VA+Q IL NE+R W+FR +Y YL +FGQ+P Sbjct: 927 VKRMMKDVFFFLFLLAVWVVSFG--VAKQAILIHNERRVDWLFRGAVYHSYLTIFGQIPG 984 Query: 915 DVDGTTYDFAHCTFTGNES-KPLCVELDE-HNLPRFPEWITIPLVCIYMLSTNILLVNLL 972 +DG ++ HC+ G + KP C E D P FPEW+T+ L+C+Y+L TNILL+NLL Sbjct: 985 YIDGVNFNPEHCSPNGTDPYKPKCPESDATQQRPAFPEWLTVLLLCLYLLFTNILLLNLL 1044 Query: 973 VAMFGYTVGTVQENNDQVWKFQRYFLVQEYCSRLNIPFPFIVFAYFYMVV 1022 +AMF YT VQE+ DQ+WKFQR+ L++EY R P PFI+ ++ + + Sbjct: 1045 IAMFNYTFQQVQEHTDQIWKFQRHDLIEEYHGRPAAPPPFILLSHLQLFI 1094
>gi|2498939|sp|Q13103|SP24_HUMAN Secreted phosphoprotein 24 precursor (Spp-24) (Secreted phosphoprotein 2) Length = 211 Score = 162 bits (410), Expect = 6e-40 Identities = 85/129 (65%), Positives = 90/129 (69%), Gaps = 11/129 (8%) Query: 1253 KVEVLDENNLVMNLEFSIRETTCRKDSGEDPATCAFQRDYYVSTAVCRSTVKVSAQQVQG 1312 +VEVLDENNLVMNLEFSIRETTCRKDSGEDPATCAFQRDYYVSTAVCRSTVKVSAQQVQG Sbjct: 70 RVEVLDENNLVMNLEFSIRETTCRKDSGEDPATCAFQRDYYVSTAVCRSTVKVSAQQVQG 129 Query: 1313 VHARCXXXXXXXXXXXXXXKHICGINSKVIEHSGTVRGVLSYDYYCVTGLISDESISEQF 1372 VHARC G + G + + GLISDESISEQF Sbjct: 130 VHARCSWSSSTSESYSSEEMIF-----------GDMLGSHKWRNNYLFGLISDESISEQF 178 Query: 1373 YDRSLGVPR 1381 YDRSLG+ R Sbjct: 179 YDRSLGIMR 187
>gi|20537335|sp|Q9HCF6|TRL3_HUMAN Long transient receptor potential channel 3 (LTrpC3) Length = 1017 Score = 80.1 bits (196), Expect = 4e-15 Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 22/149 (14%) Query: 880 VARQGILRQNEQ-RWRWIFRSVIYEPYLAMFGQVPSD-VDGTTYDFAHCTFTGNESKPLC 937 VARQ IL NE+ W+ + +++ Y PY ++G+V +D +D NE++ Sbjct: 334 VARQAILFPNEEPSWK-LAKNIFYMPYWMIYGEVFADQIDPPCGQ--------NETR--- 381 Query: 938 VELDEHNLPRFP-----EWITIPLVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWK 992 ++ + + P WI ++ Y+L NILLVNLL+A+F T V+ ++QVWK Sbjct: 382 ---EDGKIIQLPPCKTGAWIVPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWK 438 Query: 993 FQRYFLVQEYCSRLNIPFPFIVFAYFYMV 1021 FQRY L+ + R +P P I+F++ M+ Sbjct: 439 FQRYQLIMTFHERPVLPPPLIIFSHMTMI 467
Score = 57.8 bits (138), Expect = 3e-08 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Query: 694 ELFTECYSSDEDLAEQLLVYSCEAWGGSNCLELAVEATDQHFIAQPGVQNFLSKQWYGEI 753 EL + Y DE LA +LL Y + W + CL+LAV A + FIA Q L+ W G + Sbjct: 16 ELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAVAAKHRDFIAHTCSQMLLTDMWMGRL 75 Query: 754 S-RDTKNWKIILCLFIIPLV 772 R K+IL + + P + Sbjct: 76 RMRKNSGLKVILGILLPPSI 95
Score = 41.2 bits (95), Expect = 0.002 Identities = 17/56 (30%), Positives = 33/56 (58%) Query: 797 FFTSPFVVFSWNVVFYIAFLLLFAYVLLMDFHSVPHPPELVLYSLVFVLFCDEVRQ 852 F+ +P V F + + YI +L+LF Y++L+ P E ++ S +F L +++R+ Sbjct: 175 FYNAPIVKFWFYTLAYIGYLMLFNYIVLVKMERWPSTQEWIVISYIFTLGIEKMRE 230
>gi|10720321|sp|Q9UL62|TRP5_HUMAN Short transient receptor potential channel 5 (TrpC5) (Htrp-5) (Htrp5) Length = 973 Score = 42.4 bits (98), Expect = 0.001 Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 20/129 (15%) Query: 724 LELAVEATDQHFIAQPGVQNFLSKQWY-GEISRDTKNW--KIILCL---FIIPLVGCGFV 777 L++A++ + F+AQP Q L+ WY G K+W K++ C+ F+ P++ ++ Sbjct: 290 LKVAIKYHQKEFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYL 349 Query: 778 SFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLF----AYVLLMDFHSVPHP 833 + + F PF+ F + Y+ FL + +++ D H P Sbjct: 350 ISPRSNLG----------LFIKKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPP 399 Query: 834 PELVLYSLV 842 P +V + ++ Sbjct: 400 PTVVEWMIL 408
Score = 32.0 bits (71), Expect = 1.2 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 948 FPEWITIPLVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQRYFLVQEYCSR-L 1006 F E++ + Y + + ++L+N+L+AM + + ++ D WKF R L Y Sbjct: 596 FTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGG 655 Query: 1007 NIPFPF 1012 +P PF Sbjct: 656 TLPPPF 661
>gi|12643721|sp|Q13507|TRP3_HUMAN Short transient receptor potential channel 3 (TrpC3) (Htrp-3) (Htrp3) Length = 848 Score = 38.1 bits (87), Expect = 0.020 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 7/83 (8%) Query: 947 RFPEWITIPLVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQRYFLVQEYCSR- 1005 +F E I L IY ++ ++L+N+L+AM + +++++D WKF R L Y Sbjct: 641 KFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDG 700 Query: 1006 LNIPFPFIV------FAYFYMVV 1022 +P PF + F YF M + Sbjct: 701 KTLPPPFSLVPSPKSFVYFIMRI 723
>gi|18202960|sp|Q9HCX4|TRP7_HUMAN Short transient receptor potential channel 7 (TrpC7) (TRP7 protein) Length = 862 Score = 37.7 bits (86), Expect = 0.027 Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 5/81 (6%) Query: 947 RFPEWITIPLVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQRYFLVQEYCSR- 1005 +F E I L +Y ++ ++L+N+L+AM + ++E+ D WKF R L Y Sbjct: 643 KFIENIGYVLYGVYNVTMVVVLLNMLIAMINNSYQEIEEDADVEWKFARAKLWLSYFDEG 702 Query: 1006 LNIPFPFIVF----AYFYMVV 1022 +P PF + +++Y+++ Sbjct: 703 RTLPAPFNLVPSPKSFYYLIM 723
>gi|6686048|sp|Q9Y210|TRP6_HUMAN Short transient receptor potential channel 6 (TrpC6) Length = 931 Score = 37.0 bits (84), Expect = 0.042 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%) Query: 947 RFPEWITIPLVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQR---YFLVQEYC 1003 +F E I L +Y ++ I+L+N+L+AM + ++++ D WKF R +F E Sbjct: 698 KFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEG 757 Query: 1004 SRLNIPFPFI 1013 L +PF + Sbjct: 758 RTLPVPFNLV 767
>gi|13633994|sp|Q9UBN4|TRP4_HUMAN Short transient receptor potential channel 4 (TrpC4) (trp-related protein 4) (hTrp-4) (hTrp4) Length = 977 Score = 36.2 bits (82), Expect = 0.075 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 16/88 (18%) Query: 724 LELAVEATDQHFIAQPGVQNFLSKQWYGEI-SRDTKNW--KIILCLFI---IPLVGCGFV 777 L+LA++ + F+AQP Q L+ +WY E ++W K++ C I P+ ++ Sbjct: 289 LKLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYL 348 Query: 778 SFRKKPVDKHKKLLWYYVAFFTSPFVVF 805 K P+ F PF+ F Sbjct: 349 IAPKSPLG----------LFIRKPFIKF 366
Score = 33.1 bits (74), Expect = 0.64 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 948 FPEWITIPLVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQRYFLVQEYCSR-L 1006 F E++ + Y + + ++L+N+L+AM + + ++ D WKF R L Y Sbjct: 592 FTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGG 651 Query: 1007 NIPFPFIV 1014 +P PF V Sbjct: 652 TLPTPFNV 659
>gi|1351302|sp|P48995|TRP1_HUMAN Short transient receptor potential channel 1 (TrpC1) (TRP-1 protein) Length = 793 Score = 33.1 bits (74), Expect = 0.65 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 701 SSDEDLAEQLLVYSCEAWGGSNCLELAVEATDQHFIAQPGVQNFLSKQWYGEIS 754 SSDE L ++ L+ E + L+LA++ + F++Q Q FL+ W+G++S Sbjct: 290 SSDEPLDKRGLL---EERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMS 340
Score = 31.6 bits (70), Expect = 2.1 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 956 LVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQRYFLVQEYC-SRLNIPFPF 1012 +V Y + I+L LLVAM + + + D+ WKF R L Y + +P PF Sbjct: 625 IVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPF 682
>gi|24636282|sp|Q9H427|CIWF_HUMAN Potassium channel subfamily K member 15 (Acid-sensitive potassium channel protein TASK-5) (TWIK-related acid-sensitive K+ channel 5) (Two pore potassium channel KT3.3) Length = 330 Score = 30.0 bits (66), Expect = 4.8 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Query: 1186 LRFPSVRLRSILLKGCPQC--LCGKSEFPVTESVSVSGIQKLIKKKRA 1231 +R PSVR ++L C C L G + F ES + SG Q+L+ +KR Sbjct: 1 MRRPSVRAAGLVL--CTLCYLLVGAAVFDALESEAESGRQRLLVQKRG 46
>gi|34305677|sp|P03989|1B27_HUMAN HLA class I histocompatibility antigen, B-27 alpha chain precursor (MHC class I antigen B*27) Length = 362 Score = 30.0 bits (66), Expect = 5.9 Identities = 32/136 (23%), Positives = 48/136 (35%), Gaps = 20/136 (14%) Query: 400 PRTVSRLPEEETESWIKWLKEILECSH-----------LLTVIKMEEAGDEIVSNAISY- 447 PR R P E E W +E C LL EAG + N Sbjct: 67 PREEPRAPWIEQEGPEYWDRETQICKAKAQTDREDLRTLLRYYNQSEAGSHTLQNMYGCD 126 Query: 448 -----ALYKAFSTSEQDKDNWNGQLKLLLEWNQLDLANDEIFTNDRRWESADLQEVMFTA 502 L + + D ++ + L W D A R+WE+A + E + Sbjct: 127 VGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTAAQ---ITQRKWEAARVAEQLRAY 183 Query: 503 LIKDRPKFVRLFLENG 518 L + +++R +LENG Sbjct: 184 LEGECVEWLRRYLENG 199
>gi|23396581|sp|Q96DT5|DYHB_HUMAN Ciliary dynein heavy chain 11 (Axonemal beta dynein heavy chain 11) Length = 4523 Score = 29.3 bits (64), Expect = 8.5 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%) Query: 524 FLTHDVLTELFSNHFSTLVY---RNLQIAKNSYNDAL 557 FL V+ E+FS H+STLV+ L + K YN+ + Sbjct: 578 FLEKPVVMEIFSLHYSTLVHMFNTELDVCKQLYNEHM 614
Database: Non-redundant SwissProt sequences Posted date: Mar 9, 2004 2:01 PM Number of letters in database: 53,526,777 Number of sequences in database: 145,815 Lambda K H 0.322 0.138 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,292,084 Number of Sequences: 145815 Number of extensions: 145600 Number of successful extensions: 319 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 317 Number of HSP's gapped (non-prelim): 4 length of query: 1406 length of database: 5,573,534 effective HSP length: 107 effective length of query: 1299 effective length of database: 4,446,182 effective search space: 5775590418 effective search space used: 5775590418 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 64 (29.3 bits)
