gc_object_start: gene_grailexp --organism human --output pretty --dbpat grailexp_v3 

# Service: gene_grailexp
# Version: 3.3
# Description: GAT GrailEXP Gene Prediction Service
# Last Modified: October, 2001
# Tool:  GrailEXP 3.3 from ORNL.  Last updated:  October, 2001.
# Database:  GrailEXP Database Thu Feb 27 16:15:37 EST 2003 from NCBI/TIGR/Baylor/Riken (15960696 entries).  Last updated:  Thu Feb 27 16:15:37 2003.
# Sequence Name: >gene_grailexp|PID=29088
# Sequence Length: 499950
# Output_begin: pretty
--------------------------------------------------------------------------------
GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >gene_grailexp|PID=29088 (499950 bp)
--------------------------------------------------------------------------------
GAWAIN Gene Predictions (9 predicted, 7 with database similarity)



Genes with Database Similarity (7 predicted, 1 with alternative splices)


Gene 1, Variant 1        Strand: -  Bounds: 17128-18717  Exons: 2
                         Start Codon:  No     Stop Codon:  Yes

Top-Scoring Reference:  BI102160.1 (655 bp) (88% id, 17180-18814)
     >mouse|BI102160.1|est_mouse|dbEST - gi|14553053|gb|BI102160.1|BI102160
      602887930F1 NCI_CGAP_Kid14 Mus musculus cDNA clone IMAGE:5043223 5'
Reference Path:  CA558976.1 (621 bp) (91%, 17179-18717)
                 BM828178.1 (482 bp) (100%, 17248-18815)

 ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr-
 1.1.2             17128      17374      17128      17374   2    0    247  100
 1.1.1             18643      18717      18643      18717   2    1     75   92

Gene 2, Variant 1        Strand: -  Bounds: 19753-84590  Exons: 10
                         Start Codon:  Yes     Stop Codon:  No

Top-Scoring Reference:  BG613947.1 (983 bp) (96% id, 38109-84590)
     >human|BG613947.1|est_human|dbEST - gi|13665318|gb|BG613947.1|BG613947
      602641666F1 NIH_MGC_61 Homo sapiens cDNA clone IMAGE:4772680 5'
Reference Path:  AW975158.1 (624 bp) (98%, 19753-47669)
                 BG613947.1 (983 bp) (96%, 38109-84590)

 ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr-
 2.1.10            19753      19851      19753      19851   0    0     99  100
 2.1.9             23206      23298      23206      23298   0    0     93   98
 2.1.8             38084      38250      38084      38250   1    2    167  100
 2.1.7             47557      47690      47557      47690   2    2    134  100
 2.1.6             48257      48378      48257      48378   0    0    122  100
 2.1.5             49217      49287      49217      49287   1    2     71  100
 2.1.4             54990      55029      54990      55026   0    0     40  100
 2.1.3             58386      58485        ...        ...   2    1    100  100
 2.1.2             64386      64444        ...        ...   0    2     59  100
 2.1.1             84488      84590        ...        ...   2    2    103  100

Gene 3, Variant 1        Strand: +  Bounds: 136543-137071  Exons: 1
                         Start Codon:  No     Stop Codon:  Yes

Top-Scoring Reference:  BQ889897.1 (1008 bp) (85% id, 136545-137071)
     >human|BQ889897.1|est_human|dbEST - gi|22281911|gb|BQ889897.1|BQ889897
      AGENCOURT_8712298 NIH_MGC_112 Homo sapiens cDNA clone IMAGE:6295239 5
     '
Reference Path:  BF966953.2 (764 bp) (84%, 136543-137071)

 ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr-
 3.1.1            136543     137071     136543     136876   2    1    529   86

Gene 4, Variant 1        Strand: +  Bounds: 211563-259323  Exons: 7
                         Start Codon:  Yes     Stop Codon:  Yes

Top-Scoring Reference:  U45880 (2540 bp) (97% id, 237167-259323)
     >human|U45880|baylor_ht|U45880|HSU45880 Human X-linked inhibitor of ap
     otosis protein XIAP mRNA, complete cds
Reference Path:  BQ423165.1 (852 bp) (99%, 211563-237524)
                 U45880 (2540 bp) (97%, 237167-259323)

 ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr-
 4.1.1            211563     211829        ...        ...   1    1    267  100
 4.1.2            237167     238075     237199     238075   1    0    909  100
 4.1.3            240155     240254     240155     240254   1    0    100  100
 4.1.4            242774     242852     242774     242852   2    2     79  100
 4.1.5            244267     244309     244267     244309   0    0     43  100
 4.1.6            252029     252229     252029     252229   1    0    201  100
 4.1.7            258524     259323     258524     258717   1    0    800   97
 PolyA            259149     259154        ...        ...   .    .      6   79

Gene 5, Variant 1        Strand: +  Bounds: 265029-265509  Exons: 1
                         Start Codon:  No     Stop Codon:  Yes

Top-Scoring Reference:  BM663698.1 (530 bp) (97% id, 265029-265509)
     >human|BM663698.1|est_human|dbEST - gi|18969254|gb|BM663698.1|BM663698
      UI-E-CK0-aaw-d-02-0-UI.s1 UI-E-CK0 Homo sapiens cDNA clone UI-E-CK0-a
     aw-d-02-0-UI 3'
Reference Path:  BM663698.1 (530 bp) (97%, 265029-265509)

 ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr-
 5.1.1            265029     265509     265029     265154   0    2    481   97
 PolyA            265548     265553        ...        ...   .    .      6   65

Gene 6, Variant 1        Strand: +  Bounds: 299109-299499  Exons: 1
                         Start Codon:  Yes     Stop Codon:  Yes

Top-Scoring Reference:  BG431120.1 (683 bp) (98% id, 299109-299499)
     >human|BG431120.1|est_human|dbEST - gi|13337626|gb|BG431120.1|BG431120
      602498746F1 NIH_MGC_75 Homo sapiens cDNA clone IMAGE:4612378 5'
Reference Path:  BG431120.1 (683 bp) (98%, 299109-299499)

 ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr-
 6.1.1            299109     299499     299336     299488   1    1    391   98

Gene 7, Variant 1        Strand: +  Bounds: 313275-453001  Exons: 34
                         Start Codon:  Yes     Stop Codon:  Yes

Top-Scoring Reference:  BC001765.1 (4197 bp) (98% id, 313293-442300)
     >human|BC001765.1|mgc_human|MGC/NCI - gi|12804678|gb|BC001765.1|BC0017
     65 Homo sapiens, Similar to stromal antigen 2, clone MGC:1282 IMAGE:33
     52347, mRNA, complete cds
Reference Path:  BU161513.1 (848 bp) (100%, 313275-377454)
                 BC001765.1 (4197 bp) (98%, 313293-442300)
                 BQ225502.1 (836 bp) (98%, 442122-452411)
                 AK034759 (2158 bp) (91%, 445554-453001)
                 BQ721176.1 (904 bp) (93%, 452708-453577)

 ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr-
 7.1.1            313275     313392        ...        ...   1    1    118  100
 7.1.2            374067     374207     374164     374207   2    0    141  100
 7.1.3            377376     377454     377376     377454   2    0     79  100
 7.1.4            382497     382661     382497     382661   0    2    165  100
 7.1.5            389063     389159     389063     389159   0    1     97  100
 7.1.6            394105     394181     394105     394181   1    2     77  100
 7.1.7            396700     396904     396700     396904   0    0    205  100
 7.1.8            398890     399041     398890     399041   1    2    152  100
 7.1.9            400541     400614     400541     400614   0    1     74  100
 7.1.10           401722     401845     401722     401845   2    1    124  100
 7.1.11           402657     402755     402657     402755   0    2     99  100
 7.1.12           402851     402930     402851     402930   0    1     80  100
 7.1.13           407664     407771     407664     407771   2    0    108  100
 7.1.14           409402     409513     409402     409513   2    1    112   93
 7.1.15           412760     412877     412760     412877   0    1    118  100
 7.1.16           413307     413410     413307     413410   1    1    104  100
 7.1.17           414438     414530     414438     414530   0    2     93  100
 7.1.18           414652     414741     414652     414741   0    0     90  100
 7.1.19           415384     415587     415384     415587   0    0    204  100
 7.1.20           417412     417482     417412     417482   0    0     71  100
 7.1.21           417711     417798     417711     417798   2    0     88  100
 7.1.22           417892     417972     417892     417972   0    0     81  100
 7.1.23           420100     420192     420100     420192   0    0     93  100
 7.1.24           422685     422859     422685     422859   0    2    175  100
 7.1.25           427868     428007     427868     428007   1    0    140  100
 7.1.26           429493     429594     429493     429594   0    0    102  100
 7.1.27           432916     433064     432916     433064   0    0    149  100
 7.1.28           434957     435085     434957     435085   2    2    129  100
 7.1.29           438083     438306     438083     438306   2    2    224  100
 7.1.30           442111     442300     442111     442300   1    2    190  100
 7.1.31           442390     442500     442390     442500   2    1    111  100
 7.1.32           445554     445680     445554     445680   2    0    127  100
 7.1.33           446908     446985     446908     446985   0    0     78  100
 7.1.34           452110     453001     452110     452133   0    0    892  100
 PolyA            454015     454020        ...        ...   .    .      6   87

Gene 7, Variant 2        Strand: +  Bounds: 313275-453001  Exons: 33
                         Start Codon:  Yes     Stop Codon:  Yes

Top-Scoring Reference:  BC001765.1 (4197 bp) (98% id, 313293-452411)
     >human|BC001765.1|mgc_human|MGC/NCI - gi|12804678|gb|BC001765.1|BC0017
     65 Homo sapiens, Similar to stromal antigen 2, clone MGC:1282 IMAGE:33
     52347, mRNA, complete cds
Reference Path:  BU161513.1 (848 bp) (100%, 313275-377454)
                 BC001765.1 (4197 bp) (98%, 313293-452411)
                 AK034759 (2158 bp) (91%, 422765-453001)
                 BQ721176.1 (904 bp) (93%, 452708-453577)

 ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr-
 7.2.1            313275     313392        ...        ...   1    1    118  100
 7.2.2            374067     374207     374164     374207   2    0    141  100
 7.2.3            377376     377454     377376     377454   2    0     79  100
 7.2.4            382497     382661     382497     382661   0    2    165  100
 7.2.5            389063     389159     389063     389159   0    1     97  100
 7.2.6            394105     394181     394105     394181   1    2     77  100
 7.2.7            396700     396904     396700     396904   0    0    205  100
 7.2.8            398890     399041     398890     399041   1    2    152  100
 7.2.9            400541     400614     400541     400614   0    1     74  100
 7.2.10           401722     401845     401722     401845   2    1    124  100
 7.2.11           402657     402755     402657     402755   0    2     99  100
 7.2.12           402851     402930     402851     402930   0    1     80  100
 7.2.13           407664     407771     407664     407771   2    0    108  100
 7.2.14           409402     409513     409402     409513   2    1    112   93
 7.2.15           412760     412877     412760     412877   0    1    118  100
 7.2.16           413307     413410     413307     413410   1    1    104  100
 7.2.17           414438     414530     414438     414530   0    2     93  100
 7.2.18           414652     414741     414652     414741   0    0     90  100
 7.2.19           415384     415587     415384     415587   0    0    204  100
 7.2.20           417412     417482     417412     417482   0    0     71  100
 7.2.21           417711     417798     417711     417798   2    0     88  100
 7.2.22           417892     417972     417892     417972   0    0     81  100
 7.2.23           420100     420192     420100     420192   0    0     93  100
 7.2.24           422685     422859     422685     422859   0    2    175  100
 7.2.25           427868     428007     427868     428007   1    0    140  100
 7.2.26           429493     429594     429493     429594   0    0    102  100
 7.2.27           432916     433064     432916     433064   0    0    149  100
 7.2.28           434957     435085     434957     435085   2    2    129  100
 7.2.29           438083     438306     438083     438306   2    2    224  100
 7.2.30           442111     442300     442111     442300   1    2    190  100
 7.2.31           445554     445680     445554     445680   2    0    127  100
 7.2.32           446908     446985     446908     446985   0    0     78  100
 7.2.33           452110     453001     452110     452133   0    0    892  100
 PolyA            454015     454020        ...        ...   .    .      6   87

Gene 7, Variant 3        Strand: +  Bounds: 313275-453001  Exons: 34
                         Start Codon:  Yes     Stop Codon:  Yes

Top-Scoring Reference:  BC001765.1 (4197 bp) (98% id, 313293-452411)
     >human|BC001765.1|mgc_human|MGC/NCI - gi|12804678|gb|BC001765.1|BC0017
     65 Homo sapiens, Similar to stromal antigen 2, clone MGC:1282 IMAGE:33
     52347, mRNA, complete cds
Reference Path:  BU161513.1 (848 bp) (100%, 313275-377454)
                 BC001765.1 (4197 bp) (98%, 313293-452411)
                 AK034759 (2158 bp) (91%, 422765-453001)
                 BQ721176.1 (904 bp) (93%, 452708-453577)

 ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr-
 7.3.1            313275     313392        ...        ...   1    1    118  100
 7.3.2            374067     374207     374164     374207   2    0    141  100
 7.3.3            377376     377454     377376     377454   2    0     79  100
 7.3.4            382497     382661     382497     382661   0    2    165  100
 7.3.5            389063     389159     389063     389159   0    1     97  100
 7.3.6            394105     394181     394105     394181   1    2     77  100
 7.3.7            396700     396904     396700     396904   0    0    205  100
 7.3.8            398890     399041     398890     399041   1    2    152  100
 7.3.9            400541     400614     400541     400614   0    1     74  100
 7.3.10           401722     401845     401722     401845   2    1    124  100
 7.3.11           402657     402755     402657     402755   0    2     99  100
 7.3.12           402851     402930     402851     402930   0    1     80  100
 7.3.13           407664     407771     407664     407771   2    0    108  100
 7.3.14           409402     409513     409402     409513   2    1    112   93
 7.3.15           412760     412877     412760     412877   0    1    118  100
 7.3.16           413307     413410     413307     413410   1    1    104  100
 7.3.17           414438     414530     414438     414530   0    2     93  100
 7.3.18           414652     414741     414652     414741   0    0     90  100
 7.3.19           415384     415587     415384     415587   0    0    204  100
 7.3.20           417412     417482     417412     417482   0    0     71  100
 7.3.21           417711     417798     417711     417798   2    0     88  100
 7.3.22           417892     417972     417892     417972   0    0     81  100
 7.3.23           420100     420192     420100     420192   0    0     93  100
 7.3.24           422685     422859     422685     422859   0    2    175  100
 7.3.25           427868     428007     427868     428007   1    0    140  100
 7.3.26           429493     429594     429493     429594   0    0    102  100
 7.3.27           432916     433064     432916     433064   0    0    149  100
 7.3.28           434957     435085     434957     435085   2    2    129  100
 7.3.29           438083     438306     438083     438306   2    2    224  100
 7.3.30           442111     442216     442111     442114   2    1    106  100
 7.3.31           442269     442300        ...        ...   0    2     32  100
 7.3.32           445554     445680        ...        ...   2    0    127  100
 7.3.33           446908     446985        ...        ...   0    0     78  100
 7.3.34           452110     453001        ...        ...   0    0    892  100


>GrailEXP Gene 1, Var 1 mRNA|Similar to BI102160.1
tgcagcttcacacaagctaatagcccttgctatttgcaagctcattcatataactattgagcctctctac
cgaagagttggagttcctaaaggtgctaaaggctcacctgttaatgctttgcaaaacaagagagcaccaa
aacaagctgagagctttgaagatttgaggagagacgtgttcaatatgttctgttaccttggtcctcacct
ttctcacgatcccattttatttgcaaaagtggtgcgcataggcaagtcatttatgaaggaggtaagtaag
atttttcttacaaacctaaattttgaaatgaaaatattctga

>GrailEXP Gene 1, Var 1 protein|Derived from similarity to BI102160.1
AASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQAESFEDLRRDVFNMFCYLGPHL
SHDPILFAKVVRIGKSFMKEVSKIFLTNLNFEMKIF*

>GrailEXP Gene 2, Var 1 mRNA|Similar to BG613947.1
acatccgggcttctgctactagtgagaggaagatggcggccgcggctgtggtggttcccgcagagtggat
aaagaactgggagaaatcagggagaggcgaatttttgcatttatgtcggatcctcagtgaaaataaaagc
catgatagttcaacatacagagatttccagcaagctctctatgagttgtcatatcatgtaattaaaggaa
atctaaagcatgaacaggcatctaatgttcttagtgacattagtgtaagtatgatatgccctccattctt
gctgatgtattctgcatattagacattgagacaaattgtttagaagaaaaaagcaagagagactatttta
cacagttggtattagcatgtttgtatttagtttcagacacagttctaaaggaacgcctggatccagaaac
actggaatcattagggcttatcaaacaatcacagcaattcaatcaaaagtcagttaaaatcaagacaaaa
ctcttttataagcagcaaaaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctg
aattggggcaagatttatctggaagtattactagtgatttaatcttagaaaatatcaaatctttaatagg
atgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgcaggccagaacac
gatgacttctttatatctttgttagaatcttacatgagtatgtgtgaaccgcaaacactgtgtcatattc
ttgggttcaaattcaagttttaccaggaaccaaatggcgagacaccatcatctttatacagagttgcagc
agtacttctacaatttaatcttattgatttagatgatctttatgtacatcttcttccggctgataattgc
attatggatgaacacaaacgagaaattgcggaagctaagcaaattgttagaaagcttacgatggttgtgt
tgtcttct

>GrailEXP Gene 2, Var 1 protein|Derived from similarity to BG613947.1
MPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQSQQFNQKSV
KIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGSITSDLILENIKSLIGCFNLDPNRVLDVILEVFE
CRPEHDDFFISLLESYMSMCEPQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLL
PADNCIMDEHKREIAEAKQIVRKLTMVVLSS

>GrailEXP Gene 3, Var 1 mRNA|Similar to BQ889897.1
cacgtggaagctgaaactgcacctcccacgtggcccctctagccagctgagaacctcagataagaactac
acccaggccagcaccagcagctcagccactagcagcagccccaccctctgcagctggctctcctgctgct
gcactccgcggcagccaggtctgatggcccgggcggcaatcactgcagctggcatggctgtggactctgc
tgtggggcacatactgggtcatgccatcagtgggagcttcagtggagtaaataatgctgagcccccaagt
ggtgacatcacttaccagaagcctcagggaacccacccggcacagcagcagtaggctttcttgtatgaga
taaaatggtttttggaatgtgcccagaatcagggagacataaagttctgtgagggtttccatgaggtggt
gaaacagtgcagacttgcaaatggatttatctaatcaagaagttcaaattgaagaaatggaaaatcagct
ctcacaactaagttaatttagcataaaaacataattgat

>GrailEXP Gene 3, Var 1 protein|Derived from similarity to BQ889897.1
TWKLKLHLPRGPSSQLRTSDKNYTQASTSSSATSSSPTLCSWLSCCCTPRQPGLMARAAITAAGMAVDSA
VGHILGHAISGSFSGVNNAEPPSGDITYQKPQGTHPAQQQ*

>GrailEXP Gene 4, Var 1 mRNA|Similar to U45880
tgacggaccgcgcccggtgtctctttgaggccctgacgtggacacacttcgggtttcacgactccgggtt
tctccaggggatgggccggccggtagaggcgcgtgagggagacgaagggacttccgtttccttcacctag
gctggggccaagccgcagagcggagttggcatttccagattggggctcgggccgcgcctcctccgggacc
ctccccttggaccgagccgatcgccgcggggcagttcgggccggctgtcctggcgcgaaaaggtggacaa
gtcctattttcaagagaagatgacttttaacagttttgaaggatctaaaacttgtgtacctgcagacatc
aataaggaagaagaatttgtagaagagtttaatagattaaaaacttttgctaattttccaagtggtagtc
ctgtttcagcatcaacactggcacgagcagggtttctttatactggtgaaggagataccgtgcggtgctt
tagttgtcatgcagctgtagatagatggcaatatggagactcagcagttggaagacacaggaaagtatcc
ccaaattgcagatttatcaacggcttttatcttgaaaatagtgccacgcagtctacaaattctggtatcc
agaatggtcagtacaaagttgaaaactatctgggaagcagagatcattttgccttagacaggccatctga
gacacatgcagactatcttttgagaactgggcaggttgtagatatatcagacaccatatacccgaggaac
cctgccatgtatagtgaagaagctagattaaagtcctttcagaactggccagactatgctcacctaaccc
caagagagttagcaagtgctggactctactacacaggtattggtgaccaagtgcagtgcttttgttgtgg
tggaaaactgaaaaattgggaaccttgtgatcgtgcctggtcagaacacaggcgacactttcctaattgc
ttctttgttttgggccggaatcttaatattcgaagtgaatctgatgctgtgagttctgataggaatttcc
caaattcaacaaatcttccaagaaatccatccatggcagattatgaagcacggatctttacttttgggac
atggatatactcagttaacaaggagcagcttgcaagagctggattttatgctttaggtgaaggtgataaa
gtaaagtgctttcactgtggaggagggctaactgattggaagcccagtgaagacccttgggaacaacatg
ctaaatggtatccagggtgcaaatatctgttagaacagaagggacaagaatatataaacaatattcattt
aactcattcacttgaggagtgtctggtaagaactactgagaaaacaccatcactaactagaagaattgat
gataccatcttccaaaatcctatggtacaagaagctatacgaatggggttcagtttcaaggacattaaga
aaataatggaggaaaaaattcagatatctgggagcaactataaatcacttgaggttctggttgcagatct
agtgaatgctcagaaagacagtatgcaagatgagtcaagtcagacttcattacagaaagagattagtact
gaagagcagctaaggcgcctgcaagaggagaagctttgcaaaatctgtatggatagaaatattgctatcg
tttttgttccttgtggacatctagtcacttgtaaacaatgtgctgaagcagttgacaagtgtcccatgtg
ctacacagtcattactttcaagcaaaaaatttttatgtcttaatctaactctatagtaggcatgttatgt
tgttcttattaccctgattgaatgtgtgatgtgaactgactttaagtaatcaggattgaattccattagc
atttgctaccaagtaggaaaaaaaatgtacatggcagtgttttagttggcaatataatctttgaatttct
tgatttttcagggtattagctgtattatccattttttttactgttatttaattgaaaccatagactaaga
ataagaagcatcatactataactgaacacaatgtgtattcatagtatactgatttaatttctaagtgtaa
gtgaattaatcatctggattttttattcttttcagataggcttaacaaatggagctttctgtatataaat
gtggagattagagttaatctccccaatcacataatttgttttgtgtgaaaaaggaataaattgttccatg
ctggtggaaagatagagattgtttttagaggttggttgttgtgttttaggattctgtccattttctttta
aagttataaacacgtacttgtgcgaattatttttttaaagtgatttgccatttttgaaagcgtatttaat
gatagaatactatcgagcc

>GrailEXP Gene 4, Var 1 protein|Derived from similarity to U45880
MTFNSFEGSKTCVPADINKEEEFVEEFNRLKTFANFPSGSPVSASTLARAGFLYTGEGDTVRCFSCHAAV
DRWQYGDSAVGRHRKVSPNCRFINGFYLENSATQSTNSGIQNGQYKVENYLGSRDHFALDRPSETHADYL
LRTGQVVDISDTIYPRNPAMYSEEARLKSFQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNW
EPCDRAWSEHRRHFPNCFFVLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVN
KEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEE
CLVRTTEKTPSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKIMEEKIQISGSNYKSLEVLVADLVNAQKD
SMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITF
KQKIFMS*

>GrailEXP Gene 5, Var 1 mRNA|Similar to BM663698.1
ttagacaaatgctacattaatgtttgggtggtcagattctactttgaatctgaagtttgcagatatgcct
atagatttttggagtttaccactttcttattctgtatcattaatgtaatattttaaattactatatatgt
taccatttttctggatttagtaagaaatttgcagttttggtttgatgtaacaagggttttaatgtaattt
atgttagattttgcatttttttcattactgttatattttaacctgactgactgatctaattgtattagta
ttgtgaataatcatgtgaaatgttttgagacagagtactatatttgtgaatataattttatggttttttt
cacttagaacctttctgtgtggaaaactaagaaaattgctttctgctgtataatctggcattcattgtag
attaaagcttatttttctgtgaataaaacgtattcaataaaatactattctttaaaattat

>GrailEXP Gene 5, Var 1 protein|Derived from similarity to BM663698.1
LDKCYINVWVVRFYFESEVCRYAYRFLEFTTFLFCIINVIF*

>GrailEXP Gene 6, Var 1 mRNA|Similar to BG431120.1
aaaagtctgcactgaaaaaataatgcaaatgtcatttgtctacacaaactaaccctatgacatgtttact
taatacagataactagcatcaatggcagtgttaagtcatgatataattagttcctgataggaaacaatta
ttttggctagtatttctcaaatgatttaggcagaaggtagtttttccttgaaatttccagatattcataa
gtttcaactttgcttccatggagacaccaccattcagtgaaggctgtgcctctatatgcaaaagtacaca
aaaaaagaaaactgaatggattatcaaaaaagacaaaatgaagttgttcactgtagttaccatcttgttt
caggctaaaaagcatatatacctcatctaaaccctggctac

>GrailEXP Gene 6, Var 1 protein|Derived from similarity to BG431120.1
METPPFSEGCASICKSTQKKKTEWIIKKDKMKLFTVVTILFQAKKHIYLI*

>GrailEXP Gene 7, Var 1 mRNA|Similar to BC001765.1
ttcatgtgacgggcccctctgcttctcccccgccccatcatctccagcgcgtggtgggggaactgctggg
gaaggcgattggcatcgatctctccatcccttccgaggcccgacttcggaattgtcttagaagaaagaag
gcaagccaccattttacccacgtaaatatatgaatatatttctgacattgaggtgttccagaagatgata
aagaaatgatagcagctccagaaataccaactgattttaatctactacaggagtcagaaacacatttttc
ttctgacacagattttgaagatatcgaaggaaaaaaccaaaagcaaggcaaaggcaaaacttgtaaaaaa
ggcaaaaagggcccagcagaaaagggcaaaggtggaaatggaggaggaaaacctccttctggtccaaacc
gaatgaatggtcatcaccaacagaatggagtggaaaacatgatgttgtttgaagttgttaaaatgggcaa
gagtgctatgcagtcggtggtagatgattggatagaatcatacaagcatgaccgagatatagcacttctt
gaccttatcaacttttttattcagtgttcaggctgtaaaggagttgtcacagcagaaatgtttagacata
tgcagaactctgagataattcgaaaaatgactgaagaattcgatgaggatagtggagattatccacttac
catggctggtcctcagtggaagaagttcaaatccagtttttgtgaattcattggcgtgttagtacggcaa
tgtcaatatagtatcatatatgatgagtatatgatggatacagtcatttcacttcttacaggattgtctg
actcacaagtcagagcatttcgacatacaagcaccctggcagctatgaagttgatgacagctttggtgaa
tgtggcactaaatcttagcattaatatggataatacacaaagacaatatgaagcagaacggaataaaatg
attggaaaacgagccaatgagaggctagaactcctgctacaaaagcggaaagagcttcaggaaaatcaag
atgaaatagaaaatatgatgaatgcaatatttaaaggagtgtttgtacatagataccgtgatgcgatagc
tgaaattcgagctatttgcattgaagagattggcatttggatgaagatgtatagtgatgcctttcttaat
gacagttatttaaaatatgttggttggactatgcatgataagcaaggtgaagtaagactcaaatgtctta
ctgctctacaagggctttattataacaaagagcttaattccaaactggaactttttaccagtcggttcaa
ggatagaattgtgtctatgacccttgacaaagaatatgatgttgcagtacaagcaataaaattactcact
cttgttttacagagtagtgaagaagttctcactgcagaagattgtgaaaatgtctatcatctggtttatt
cagctcaccggccagtagcagtagcagctggagaatttctctacaaaaagctcttcagtcgtagagatcc
agaggaggatggaatgatgaaaagaagaggaagacaaggtccaaatgccaaccttgttaagacattggtt
tttttctttctagaaagtgagttacatgagcatgcagcataccttgtggatagcatgtgggactgtgcta
ctgagctgctgaaagactgggaatgtatgaatagcttgttactggaagagccacttagtggagaggaagc
actaacagataggcaagagagtgctctgattgaaataatgctttgtaccattagacaagcggctgaatgt
catcctcccgtgggaagagggacaggaaaaagggtgcttacagcaaaggagaagaagacacagttggatg
ataggacaaaaatcactgagctttttgccgtggcccttcctcagttattagcaaaatactctgtagatgc
agaaaaggtgactaacttgttgcagttgcctcagtactttgatttggaaatatataccactggacgatta
gaaaagcatttggatgccttattgcgacagatccggaatattgtagagaagcacacagatacagatgttt
tggaagcatgttctaaaacttaccatgcactctgtaatgaagagttcacaatcttcaacagagtagatat
ttcaagaagtcaactgatagatgaattggcagataaatttaaccggcttcttgaagattttctgcaagag
ggtgaagaacctgatgaagatgatgcatatcaggtattgtcaacattgaagaggatcactgcttttcata
atgcccatgacctttcaaagtgggatttatttgcttgtaattacaaactcttgaaaactggaatcgaaaa
tggagacatgcctgagcagattgttattcacgcactgcagtgtactcactatgtaatcctttggcaactt
gctaagataactgaaagcagctctacaaaggaggacttgctgcgtttaaagaaacaaatgagagtatttt
gtcagatatgtcaacattacctgaccaacgtgaatactactgttaaggaacaggccttcactattctgtg
tgatattttgatgatcttcagccatcagattatgtcaggagggcgtgacatgttagagccattagtgtat
acccctgattcttcattgcagtctgagttgctcagctttattttggatcatgtcttcattgaacaggatg
atgataataatagtgcagatggtcagcaagaggatgaagccagtaaaattgaagctctgcacaagagaag
aaatttacttgcagcattttgtaagctaattgtatatactgtggtggagatgaatacagctgcagatatc
ttcaaacagtatatgaagtattataatgactatggagatatcatcaaagaaacaatgagtaaaacaaggc
agatagacaaaattcagtgtgctaagacccttattctcagtctgcaacagctttttaatgaaatgataca
agaaaatggctataattttgatagatcatcctctacatttagtggcataaaagaacttgctcgacgtttt
gctttaacttttggacttgatcagttgaaaacaagagaagccattgccatgctacacaaagatggcatag
aatttgcttttaaagagcctaatccgcaaggggagagccatccacctttaaatttggcatttcttgatat
tctgagtgaattttcttctaaactacttcgacaagacaaaagaacagtgtatgtttacttggaaaagttc
atgacctttcagatgtcactccgaagagaggatgtgtggcttccactgatgtcttaccgaaattctttgc
tagctggtggtgatgatgacaccatgtcagtcattagtggaatcagcagccgggggtcaacagtacggag
taaaaaatcaaaaccatctacaggaaaacggaaagtggttgagggcatgcagctttcactcactgaagaa
agtagtagtagtgacagtatgtggttaagcagagaacaaacactgcacacccctgttatgatgcagacac
cacaactcacctccactattatgagagagcccaaaagattacggcctgaggatagcttcatgagtgttta
tccaatgcagactgaacatcatcaaacacctcttgattataacacgcaggtaacatggatgttagctcaa
agacaacaagaggaagcaaggcaacagcaggagagagcagcaatgagctatgttaaactgcgaactaatc
ttcagcatgccattcggcgtggcacaagcctaatggaagatgatgaagagccaattgtggaagatgttat
gatgtcctcagaagggaggattgaggatcttaatgagggaatggattttgacaccatggatatagatttg
ccaccatcaaagaacagacgagagagaacagaactgaagcctgatttctttgatccagcttcaattatgg
atgaatcagttcttggagtgtcaatgttttaataccagtacacaattaaatctgtggtgaagtcattttc
taagtggaagaggaaattttaaagtgtggtagatacagtgaaattctgtacagatttttctctaaggaga
atatgacatgcttatgcttaccaagatcaagtgcattgaggggcagttttgtttgcctgaataaacgtaa
aggacaagtaaacaatttgatgataagctacagtttttcttagaaagtaaatattttatttatgcgctgt
tagttggcttttgaatcgattatttcatgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaatctgaa
gaggcatttggtacagatatgaattctcttacatttatttactggttgtactaaataatgatgacctctg
ctggatttctgtttacatccagaaaacaatgttaaggatgtatttattcccctaccctgaagaaagtgta
ggatagaattgtttttagcattctaaatttaaatgcttaaaacgtcaatcaacaaaactttgttttaaat
attgtaattgtggagaaaagtaaacttataagcagaacttttacaattttttcatctaaaagtattttaa
gatatttttaaaatccaagagcttctctatacttttcagaaatatccagatgcagtgaactgccagaagg
taaccagtctcaaacatgcttatcccattatcaaccctgaaagtttgcttgtcctttaagataaaaatgt
aatgttgtgatattccttccagtaatgccactgtattttgtctccaaataaaagaagcttattgtagtat
gtttgcagaaaaattctaaacaaaaattatacagcttattagagtgtgggaatagggatc

>GrailEXP Gene 7, Var 1 protein|Derived from similarity to BC001765.1
MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGGGKPPSGPNRM
NGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQ
NSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDS
QVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDE
IENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTA
LQGLYYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATE
LLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDR
TKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIVEKHTDTDVLE
ACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNA
HDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQ
ICQHYLTNVNTTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQI
DKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEF
AFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWLPLMSYRNSLLA
GGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQ
LTSTIMREPKRLRPEDSFMSVYPMQTEHHQTPLDYNTQVTWMLAQRQQEEARQQQERAAMSYVKLRTNLQ
HAIRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDE
SVLGVSMF*

>GrailEXP Gene 7, Var 2 mRNA|Similar to BC001765.1
ttcatgtgacgggcccctctgcttctcccccgccccatcatctccagcgcgtggtgggggaactgctggg
gaaggcgattggcatcgatctctccatcccttccgaggcccgacttcggaattgtcttagaagaaagaag
gcaagccaccattttacccacgtaaatatatgaatatatttctgacattgaggtgttccagaagatgata
aagaaatgatagcagctccagaaataccaactgattttaatctactacaggagtcagaaacacatttttc
ttctgacacagattttgaagatatcgaaggaaaaaaccaaaagcaaggcaaaggcaaaacttgtaaaaaa
ggcaaaaagggcccagcagaaaagggcaaaggtggaaatggaggaggaaaacctccttctggtccaaacc
gaatgaatggtcatcaccaacagaatggagtggaaaacatgatgttgtttgaagttgttaaaatgggcaa
gagtgctatgcagtcggtggtagatgattggatagaatcatacaagcatgaccgagatatagcacttctt
gaccttatcaacttttttattcagtgttcaggctgtaaaggagttgtcacagcagaaatgtttagacata
tgcagaactctgagataattcgaaaaatgactgaagaattcgatgaggatagtggagattatccacttac
catggctggtcctcagtggaagaagttcaaatccagtttttgtgaattcattggcgtgttagtacggcaa
tgtcaatatagtatcatatatgatgagtatatgatggatacagtcatttcacttcttacaggattgtctg
actcacaagtcagagcatttcgacatacaagcaccctggcagctatgaagttgatgacagctttggtgaa
tgtggcactaaatcttagcattaatatggataatacacaaagacaatatgaagcagaacggaataaaatg
attggaaaacgagccaatgagaggctagaactcctgctacaaaagcggaaagagcttcaggaaaatcaag
atgaaatagaaaatatgatgaatgcaatatttaaaggagtgtttgtacatagataccgtgatgcgatagc
tgaaattcgagctatttgcattgaagagattggcatttggatgaagatgtatagtgatgcctttcttaat
gacagttatttaaaatatgttggttggactatgcatgataagcaaggtgaagtaagactcaaatgtctta
ctgctctacaagggctttattataacaaagagcttaattccaaactggaactttttaccagtcggttcaa
ggatagaattgtgtctatgacccttgacaaagaatatgatgttgcagtacaagcaataaaattactcact
cttgttttacagagtagtgaagaagttctcactgcagaagattgtgaaaatgtctatcatctggtttatt
cagctcaccggccagtagcagtagcagctggagaatttctctacaaaaagctcttcagtcgtagagatcc
agaggaggatggaatgatgaaaagaagaggaagacaaggtccaaatgccaaccttgttaagacattggtt
tttttctttctagaaagtgagttacatgagcatgcagcataccttgtggatagcatgtgggactgtgcta
ctgagctgctgaaagactgggaatgtatgaatagcttgttactggaagagccacttagtggagaggaagc
actaacagataggcaagagagtgctctgattgaaataatgctttgtaccattagacaagcggctgaatgt
catcctcccgtgggaagagggacaggaaaaagggtgcttacagcaaaggagaagaagacacagttggatg
ataggacaaaaatcactgagctttttgccgtggcccttcctcagttattagcaaaatactctgtagatgc
agaaaaggtgactaacttgttgcagttgcctcagtactttgatttggaaatatataccactggacgatta
gaaaagcatttggatgccttattgcgacagatccggaatattgtagagaagcacacagatacagatgttt
tggaagcatgttctaaaacttaccatgcactctgtaatgaagagttcacaatcttcaacagagtagatat
ttcaagaagtcaactgatagatgaattggcagataaatttaaccggcttcttgaagattttctgcaagag
ggtgaagaacctgatgaagatgatgcatatcaggtattgtcaacattgaagaggatcactgcttttcata
atgcccatgacctttcaaagtgggatttatttgcttgtaattacaaactcttgaaaactggaatcgaaaa
tggagacatgcctgagcagattgttattcacgcactgcagtgtactcactatgtaatcctttggcaactt
gctaagataactgaaagcagctctacaaaggaggacttgctgcgtttaaagaaacaaatgagagtatttt
gtcagatatgtcaacattacctgaccaacgtgaatactactgttaaggaacaggccttcactattctgtg
tgatattttgatgatcttcagccatcagattatgtcaggagggcgtgacatgttagagccattagtgtat
acccctgattcttcattgcagtctgagttgctcagctttattttggatcatgtcttcattgaacaggatg
atgataataatagtgcagatggtcagcaagaggatgaagccagtaaaattgaagctctgcacaagagaag
aaatttacttgcagcattttgtaagctaattgtatatactgtggtggagatgaatacagctgcagatatc
ttcaaacagtatatgaagtattataatgactatggagatatcatcaaagaaacaatgagtaaaacaaggc
agatagacaaaattcagtgtgctaagacccttattctcagtctgcaacagctttttaatgaaatgataca
agaaaatggctataattttgatagatcatcctctacatttagtggcataaaagaacttgctcgacgtttt
gctttaacttttggacttgatcagttgaaaacaagagaagccattgccatgctacacaaagatggcatag
aatttgcttttaaagagcctaatccgcaaggggagagccatccacctttaaatttggcatttcttgatat
tctgagtgaattttcttctaaactacttcgacaagacaaaagaacagtgtatgtttacttggaaaagttc
atgacctttcagatgtcactccgaagagaggatgtgtggcttccactgatgtcttaccgaaattctttgc
tagctggtggtgatgatgacaccatgtcagtcattagtggaatcagcagccgggggtcaacagtacggag
taaaaaatcaaaaccatctacaggaaaacggaaagtggttgagggcatgcagctttcactcactgaagaa
agtagtagtagtgacagtatgtggttaagcagagaacaaacactgcacacccctgttatgatgcagacac
cacaactcacctccactattatgagagagcccaaaagattacggcctgaggatagcttcatgagtgttta
tccaatgcagactgaacatcatcaaacacctcttgattataatcggcgtggcacaagcctaatggaagat
gatgaagagccaattgtggaagatgttatgatgtcctcagaagggaggattgaggatcttaatgagggaa
tggattttgacaccatggatatagatttgccaccatcaaagaacagacgagagagaacagaactgaagcc
tgatttctttgatccagcttcaattatggatgaatcagttcttggagtgtcaatgttttaataccagtac
acaattaaatctgtggtgaagtcattttctaagtggaagaggaaattttaaagtgtggtagatacagtga
aattctgtacagatttttctctaaggagaatatgacatgcttatgcttaccaagatcaagtgcattgagg
ggcagttttgtttgcctgaataaacgtaaaggacaagtaaacaatttgatgataagctacagtttttctt
agaaagtaaatattttatttatgcgctgttagttggcttttgaatcgattatttcatgcnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnncaatctgaagaggcatttggtacagatatgaattctcttacatttattta
ctggttgtactaaataatgatgacctctgctggatttctgtttacatccagaaaacaatgttaaggatgt
atttattcccctaccctgaagaaagtgtaggatagaattgtttttagcattctaaatttaaatgcttaaa
acgtcaatcaacaaaactttgttttaaatattgtaattgtggagaaaagtaaacttataagcagaacttt
tacaattttttcatctaaaagtattttaagatatttttaaaatccaagagcttctctatacttttcagaa
atatccagatgcagtgaactgccagaaggtaaccagtctcaaacatgcttatcccattatcaaccctgaa
agtttgcttgtcctttaagataaaaatgtaatgttgtgatattccttccagtaatgccactgtattttgt
ctccaaataaaagaagcttattgtagtatgtttgcagaaaaattctaaacaaaaattatacagcttatta
gagtgtgggaatagggatc

>GrailEXP Gene 7, Var 2 protein|Derived from similarity to BC001765.1
MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGGGKPPSGPNRM
NGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQ
NSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDS
QVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDE
IENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTA
LQGLYYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATE
LLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDR
TKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIVEKHTDTDVLE
ACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNA
HDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQ
ICQHYLTNVNTTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQI
DKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEF
AFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWLPLMSYRNSLLA
GGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQ
LTSTIMREPKRLRPEDSFMSVYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMD
FDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF*

>GrailEXP Gene 7, Var 3 mRNA|Similar to BC001765.1
ttcatgtgacgggcccctctgcttctcccccgccccatcatctccagcgcgtggtgggggaactgctggg
gaaggcgattggcatcgatctctccatcccttccgaggcccgacttcggaattgtcttagaagaaagaag
gcaagccaccattttacccacgtaaatatatgaatatatttctgacattgaggtgttccagaagatgata
aagaaatgatagcagctccagaaataccaactgattttaatctactacaggagtcagaaacacatttttc
ttctgacacagattttgaagatatcgaaggaaaaaaccaaaagcaaggcaaaggcaaaacttgtaaaaaa
ggcaaaaagggcccagcagaaaagggcaaaggtggaaatggaggaggaaaacctccttctggtccaaacc
gaatgaatggtcatcaccaacagaatggagtggaaaacatgatgttgtttgaagttgttaaaatgggcaa
gagtgctatgcagtcggtggtagatgattggatagaatcatacaagcatgaccgagatatagcacttctt
gaccttatcaacttttttattcagtgttcaggctgtaaaggagttgtcacagcagaaatgtttagacata
tgcagaactctgagataattcgaaaaatgactgaagaattcgatgaggatagtggagattatccacttac
catggctggtcctcagtggaagaagttcaaatccagtttttgtgaattcattggcgtgttagtacggcaa
tgtcaatatagtatcatatatgatgagtatatgatggatacagtcatttcacttcttacaggattgtctg
actcacaagtcagagcatttcgacatacaagcaccctggcagctatgaagttgatgacagctttggtgaa
tgtggcactaaatcttagcattaatatggataatacacaaagacaatatgaagcagaacggaataaaatg
attggaaaacgagccaatgagaggctagaactcctgctacaaaagcggaaagagcttcaggaaaatcaag
atgaaatagaaaatatgatgaatgcaatatttaaaggagtgtttgtacatagataccgtgatgcgatagc
tgaaattcgagctatttgcattgaagagattggcatttggatgaagatgtatagtgatgcctttcttaat
gacagttatttaaaatatgttggttggactatgcatgataagcaaggtgaagtaagactcaaatgtctta
ctgctctacaagggctttattataacaaagagcttaattccaaactggaactttttaccagtcggttcaa
ggatagaattgtgtctatgacccttgacaaagaatatgatgttgcagtacaagcaataaaattactcact
cttgttttacagagtagtgaagaagttctcactgcagaagattgtgaaaatgtctatcatctggtttatt
cagctcaccggccagtagcagtagcagctggagaatttctctacaaaaagctcttcagtcgtagagatcc
agaggaggatggaatgatgaaaagaagaggaagacaaggtccaaatgccaaccttgttaagacattggtt
tttttctttctagaaagtgagttacatgagcatgcagcataccttgtggatagcatgtgggactgtgcta
ctgagctgctgaaagactgggaatgtatgaatagcttgttactggaagagccacttagtggagaggaagc
actaacagataggcaagagagtgctctgattgaaataatgctttgtaccattagacaagcggctgaatgt
catcctcccgtgggaagagggacaggaaaaagggtgcttacagcaaaggagaagaagacacagttggatg
ataggacaaaaatcactgagctttttgccgtggcccttcctcagttattagcaaaatactctgtagatgc
agaaaaggtgactaacttgttgcagttgcctcagtactttgatttggaaatatataccactggacgatta
gaaaagcatttggatgccttattgcgacagatccggaatattgtagagaagcacacagatacagatgttt
tggaagcatgttctaaaacttaccatgcactctgtaatgaagagttcacaatcttcaacagagtagatat
ttcaagaagtcaactgatagatgaattggcagataaatttaaccggcttcttgaagattttctgcaagag
ggtgaagaacctgatgaagatgatgcatatcaggtattgtcaacattgaagaggatcactgcttttcata
atgcccatgacctttcaaagtgggatttatttgcttgtaattacaaactcttgaaaactggaatcgaaaa
tggagacatgcctgagcagattgttattcacgcactgcagtgtactcactatgtaatcctttggcaactt
gctaagataactgaaagcagctctacaaaggaggacttgctgcgtttaaagaaacaaatgagagtatttt
gtcagatatgtcaacattacctgaccaacgtgaatactactgttaaggaacaggccttcactattctgtg
tgatattttgatgatcttcagccatcagattatgtcaggagggcgtgacatgttagagccattagtgtat
acccctgattcttcattgcagtctgagttgctcagctttattttggatcatgtcttcattgaacaggatg
atgataataatagtgcagatggtcagcaagaggatgaagccagtaaaattgaagctctgcacaagagaag
aaatttacttgcagcattttgtaagctaattgtatatactgtggtggagatgaatacagctgcagatatc
ttcaaacagtatatgaagtattataatgactatggagatatcatcaaagaaacaatgagtaaaacaaggc
agatagacaaaattcagtgtgctaagacccttattctcagtctgcaacagctttttaatgaaatgataca
agaaaatggctataattttgatagatcatcctctacatttagtggcataaaagaacttgctcgacgtttt
gctttaacttttggacttgatcagttgaaaacaagagaagccattgccatgctacacaaagatggcatag
aatttgcttttaaagagcctaatccgcaaggggagagccatccacctttaaatttggcatttcttgatat
tctgagtgaattttcttctaaactacttcgacaagacaaaagaacagtgtatgtttacttggaaaagttc
atgacctttcagatgtcactccgaagagaggatgtgtggcttccactgatgtcttaccgaaattctttgc
tagctggtggtgatgatgacaccatgtcagtcattagtggaatcagcagccgggggtcaacagtacggag
taaaaaatcaaaaccatctacaggaaaacggaaagtggttgagggcatgcagctttcactcaxctgaaga
aagtagtagtagtgacagtatgtggttaagcagagaacaaacactgcacacccctgttatgatgcagaca
ccacaactcacctccactattatgagagaactgaacatcatcaaacacctcttgattataatcggcgtgg
cacaagcctaatggaagatgatgaagagccaattgtggaagatgttatgatgtcctcagaagggaggatt
gaggatcttaatgagggaatggattttgacaccatggatatagatttgccaccatcaaagaacagacgag
agagaacagaactgaagcctgatttctttgatccagcttcaattatggatgaatcagttcttggagtgtc
aatgttttaataccagtacacaattaaatctgtggtgaagtcattttctaagtggaagaggaaattttaa
agtgtggtagatacagtgaaattctgtacagatttttctctaaggagaatatgacatgcttatgcttacc
aagatcaagtgcattgaggggcagttttgtttgcctgaataaacgtaaaggacaagtaaacaatttgatg
ataagctacagtttttcttagaaagtaaatattttatttatgcgctgttagttggcttttgaatcgatta
tttcatgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaatctgaagaggcatttggtacagatatga
attctcttacatttatttactggttgtactaaataatgatgacctctgctggatttctgtttacatccag
aaaacaatgttaaggatgtatttattcccctaccctgaagaaagtgtaggatagaattgtttttagcatt
ctaaatttaaatgcttaaaacgtcaatcaacaaaactttgttttaaatattgtaattgtggagaaaagta
aacttataagcagaacttttacaattttttcatctaaaagtattttaagatatttttaaaatccaagagc
ttctctatacttttcagaaatatccagatgcagtgaactgccagaaggtaaccagtctcaaacatgctta
tcccattatcaaccctgaaagtttgcttgtcctttaagataaaaatgtaatgttgtgatattccttccag
taatgccactgtattttgtctccaaataaaagaagcttattgtagtatgtttgcagaaaaattctaaaca
aaaattatacagcttattagagtgtgggaatagggatc

>GrailEXP Gene 7, Var 3 protein|Derived from similarity to BC001765.1
MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGGGKPPSGPNRM
NGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQ
NSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDS
QVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDE
IENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTA
LQGLYYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA
HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATE
LLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDR
TKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIVEKHTDTDVLE
ACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNA
HDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQ
ICQHYLTNVNTTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD
NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQI
DKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEF
AFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWLPLMSYRNSLLA
GGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQLSLX*


Genes with No Database Evidence (2 predicted)


Gene 8, Variant 1     Strand: -  Bounds: 151545-151760  Exons: 1
                         Start Codon:  Yes     Stop Codon:  Yes

 ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr-
 8.1.1            151545     151760     151545     151760   0    1    216   63

Gene 9, Variant 1     Strand: -  Bounds: 482559-482765  Exons: 1
                         Start Codon:  Yes     Stop Codon:  Yes

 ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr-
 9.1.1            482559     482765     482559     482765   0    1    207   60


>GrailEXP Gene 8, Var 1 mRNA
atgacaccatggcacatcagtgccaaggacatgacccacgtatatacccacagagaacactttccaaacc
agctcatggctagaccagggtttatggccaaccttcagctagacatactgagacagctgcccctcagata
cctgcttatgcctccactaagggggcaggctttgctgagacaggatgtggacatctccctgctcaacaaa
ccatga

>GrailEXP Gene 8, Var 1 protein
MTPWHISAKDMTHVYTHREHFPNQLMARPGFMANLQLDILRQLPLRYLLMPPLRGQALLRQDVDISLLNK
P*

>GrailEXP Gene 9, Var 1 mRNA
atgataaatcatgtttcatccaaatatagtaacaaagaacgtaatgactataaagacaagaaagtgttag
agacaagtaaggtaaccaaagctcatttgattctcattaagcaagcttcaaaaaaacagactttacagga
atcctttaaggcaattccttattgtgttgagtctatggagtttaagaatctaaacaaaacttgttga

>GrailEXP Gene 9, Var 1 protein
MINHVSSKYSNKERNDYKDKKVLETSKVTKAHLILIKQASKKQTLQESFKAIPYCVESMEFKNLNKTC*
--------------------------------------------------------------------------------
GALAHAD Gene Alignments (1256 located: 116 displayed, 1140 redundant)

 Index Std    Begin       End         Accession     Database   Organism   Length

      1 -      17179      18717         CA558976.1    est_mouse      mouse   621

  2 pieces   Seq exons = (17179..17374,18643..18717)
 91% ident   Ref exons = (271..76,75..1)

      2 -      17180      18814         BI102160.1    est_mouse      mouse   655

  2 pieces   Seq exons = (17180..17374,18643..18814)
 88% ident   Ref exons = (476..282,281..110)

      3 -      17248      18815         BM828178.1    est_human      human   482

  2 pieces   Seq exons = (17248..17374,18643..18815)
100% ident   Ref exons = (482..355,354..182)

      4 -      19753      38251         AA967531.1    est_mouse      mouse   388

  3 pieces   Seq exons = (19753..19851,23206..23298,38084..38251)
 92% ident   Ref exons = (20..118,119..211,212..379)

      5 -      19753      47598         AI639237.1   est_others        rat   426

  4 pieces   Seq exons = (19753..19851,23206..23298,38084..38250,47557..47598)
 92% ident   Ref exons = (26..124,125..217,218..384,385..426)

      6 -      19753      47669         AW975158.1    est_human      human   624

  4 pieces   Seq exons = (19753..19851,23206..23298,38084..38250,47557..47669)
 99% ident   Ref exons = (153..251,252..344,345..511,512..624)

      7 -      23224      84573         AU133454.1    est_human      human   880

  9 pieces   Seq exons = (23224..23298,38084..38250,47557..47690,48257..48371,
                          49217..49287,54990..55029,58386..58485,64386..64444,
                          84488..84573)
 98% ident   Ref exons = (854..779,778..610,609..476,475..361,360..290,
                          289..248,247..146,145..87,86..1)

      8 -      23236      49290         BI734910.1    est_mouse      mouse   617

  5 pieces   Seq exons = (23236..23298,38084..38250,47557..47690,48257..48378,
                          49217..49290)
 93% ident   Ref exons = (617..555,554..388,387..253,252..131,130..58)

      9 -      23268      64444         BG620462.1    est_human      human   752

  8 pieces   Seq exons = (23268..23298,38084..38250,47557..47690,48257..48378,
                          49217..49287,54990..55029,58386..58485,64386..64444)
 98% ident   Ref exons = (751..721,720..553,552..419,418..297,296..226,
                          225..184,183..82,81..23)

     10 -      37898      38236         AW081961.1    est_human      human   560

  1 piece    Seq exons = (37898..38236)
 99% ident   Ref exons = (222..560)

     11 -      38083      47667         BF548094.1   est_others        rat   473

  2 pieces   Seq exons = (38083..38250,47557..47667)
 91% ident   Ref exons = (195..362,363..473)

     12 -      38083      48377         BI661745.1    est_mouse      mouse   756

  3 pieces   Seq exons = (38083..38250,47557..47690,48257..48377)
 91% ident   Ref exons = (421..254,253..121,120..1)

     13 -      38083      48379         BU901820.1   est_others    unknown   928

  3 pieces   Seq exons = (38083..38250,47557..47690,48257..48379)
 80% ident   Ref exons = (827..660,659..526,525..403)

     14 -      38085      84579         AW044760.1    est_mouse      mouse   790

  8 pieces   Seq exons = (38085..38250,47557..47690,48257..48378,49217..49287,
                          54990..55029,58386..58485,64386..64444,84488..84579)
 91% ident   Ref exons = (789..624,623..490,489..368,367..297,296..255,
                          254..153,152..94,93..2)

     15 -      38109      84590         BG613947.1    est_human      human   983

  8 pieces   Seq exons = (38109..38250,47557..47690,48257..48378,49217..49287,
                          54990..55029,58386..58485,64386..64444,84488..84590)
 98% ident   Ref exons = (782..637,636..502,501..380,379..309,308..267,
                          266..165,164..106,105..3)

     16 -      47255      47662           R89769.1    est_human      human   464

  1 piece    Seq exons = (47255..47662)
 93% ident   Ref exons = (415..1)

     17 -      47329      47703           H78263.1    est_human      human   423

  1 piece    Seq exons = (47329..47703)
 95% ident   Ref exons = (383..4)

     18 -      47556      48376         AA859985.1   est_others        rat   278

  2 pieces   Seq exons = (47556..47690,48257..48376)
 91% ident   Ref exons = (273..139,138..19)

     19 -      47559      84588         BB631372.1    est_mouse      mouse   628

  7 pieces   Seq exons = (47559..47690,48257..48378,49217..49287,54990..55029,
                          58386..58485,64386..64444,84488..84588)
 91% ident   Ref exons = (625..499,498..377,376..306,305..264,263..162,
                          161..103,102..2)

     20 -      48140      48582         BG210315.1    est_human      human   710

  1 piece    Seq exons = (48140..48582)
 97% ident   Ref exons = (237..679)

     21 -      54990      64451           AK038135   riken_cdna      mouse  1674

  3 pieces   Seq exons = (54990..55029,58386..58485,64386..64451)
 89% ident   Ref exons = (1655..1614,1613..1512,1511..1446)

     22 +     136543     137058         BF966178.1    est_human      human   866

  1 piece    Seq exons = (136543..137058)
 84% ident   Ref exons = (81..592)

     23 +     136543     137071         BF966953.2    est_human      human   764

  1 piece    Seq exons = (136543..137071)
 84% ident   Ref exons = (678..151)

     24 +     136545     136866         AV588667.1   est_others    unknown   582

  1 piece    Seq exons = (136545..136866)
 81% ident   Ref exons = (55..374)

     25 +     136545     137035         BE752232.1   est_others    unknown   538

  1 piece    Seq exons = (136545..137035)
 79% ident   Ref exons = (2..496)

     26 +     136545     137035         BI681637.1   est_others    unknown   580

  1 piece    Seq exons = (136545..137035)
 79% ident   Ref exons = (60..554)

     27 +     136545     137071           W00667.1    est_human      human   528

  2 pieces   Seq exons = (136545..136661,136877..137071)
 84% ident   Ref exons = (24..138,139..335)

     28 -     136545     137071         BM463344.1    est_human      human   655

  2 pieces   Seq exons = (136545..136657,136834..137071)
 84% ident   Ref exons = (57..167,168..407)

     29 +     136545     137071         AV702108.1    est_human      human   713

  2 pieces   Seq exons = (136545..136636,136697..137071)
 84% ident   Ref exons = (33..124,125..500)

     30 +     136545     137071         BI668119.1    est_human      human   785

  2 pieces   Seq exons = (136545..136661,136731..137071)
 84% ident   Ref exons = (75..195,196..533)

     31 +     136545     137071         AL533242.1    est_human      human   791

  1 piece    Seq exons = (136545..137071)
 84% ident   Ref exons = (43..567)

     32 +     136545     137071         BC003079.1    mgc_human      human   796

  1 piece    Seq exons = (136545..137071)
 84% ident   Ref exons = (53..577)

     33 +     136545     137071         BE250573.1    est_human      human  1001

  1 piece    Seq exons = (136545..137071)
 84% ident   Ref exons = (25..549)

     34 +     136545     137071         BG121057.1    est_human      human  1019

  1 piece    Seq exons = (136545..137071)
 84% ident   Ref exons = (40..564)

     35 +     136545     137071         BM471726.1    est_human      human  1048

  1 piece    Seq exons = (136545..137071)
 84% ident   Ref exons = (19..543)

     36 -     136598     137071         AA112045.1    est_human      human   436

  2 pieces   Seq exons = (136598..136724,136931..137071)
 85% ident   Ref exons = (102..225,226..368)

     37 +     136622     136857         AA050224.1    est_mouse      mouse   458

  1 piece    Seq exons = (136622..136857)
 79% ident   Ref exons = (101..334)

     38 +     211300     252192         BM805359.1    est_human      human  1177

  5 pieces   Seq exons = (211300..211441,240155..240254,242774..242852,
                          244267..244309,252029..252192)
 98% ident   Ref exons = (1..142,143..242,243..321,322..364,365..529)

     39 +     211413     258699         AV706807.1    est_human      human   716

  6 pieces   Seq exons = (211413..211441,211703..211829,240155..240254,
                          244267..244309,252029..252229,258524..258699)
 98% ident   Ref exons = (1..29,30..156,157..256,257..299,300..500,501..675)

     40 +     211414     237666         AL713196.1    est_human      human   529

  2 pieces   Seq exons = (211414..211441,237167..237666)
 99% ident   Ref exons = (2..29,30..529)

     41 +     211563     237524         BQ423165.1    est_human      human   852

  2 pieces   Seq exons = (211563..211829,237167..237524)
 99% ident   Ref exons = (24..290,291..656)

     42 +     211784     258801            HT27798    tigr_egad      human  1659

  7 pieces   Seq exons = (211784..211829,237167..238075,240155..240254,
                          242774..242852,244267..244309,252029..252229,
                          258524..258801)
 99% ident   Ref exons = (4..49,50..958,959..1058,1059..1137,1138..1180,
                          1181..1381,1382..1659)

     43 +     236733     237216         BX119811.1    est_human      human   484

  1 piece    Seq exons = (236733..237216)
100% ident   Ref exons = (1..484)

     44 +     237133     242845            ET62738    tigr_egad      mouse  2691

  3 pieces   Seq exons = (237133..238075,240155..240254,242774..242845)
 88% ident   Ref exons = (606..1545,1546..1643,1644..1717)

     45 +     237166     242845        NM_022231.1  refseq_mrna      other  2468

  3 pieces   Seq exons = (237166..238075,240155..240254,242774..242845)
 90% ident   Ref exons = (297..1203,1204..1303,1304..1375)

     46 +     237166     259323             U45880    baylor_ht      human  2540

  6 pieces   Seq exons = (237166..238075,240155..240254,242774..242852,
                          244267..244309,252029..252229,258524..259323)
 99% ident   Ref exons = (1..910,911..1010,1011..1089,1090..1132,1133..1333,
                          1334..2133)

     47 +     252028     258716            ET62738    tigr_egad      mouse  2691

  2 pieces   Seq exons = (252028..252229,258524..258716)
 90% ident   Ref exons = (1767..1968,1969..2161)

     48 +     252028     258825        NM_022231.1  refseq_mrna      other  2468

  2 pieces   Seq exons = (252028..252229,258524..258825)
 89% ident   Ref exons = (1425..1626,1627..1925)

     49 +     258521     258697         BB491005.1    est_mouse      mouse   319

  1 piece    Seq exons = (258521..258697)
 91% ident   Ref exons = (142..318)

     50 +     258521     258697         BB495446.1    est_mouse      mouse   339

  1 piece    Seq exons = (258521..258697)
 92% ident   Ref exons = (163..339)

     51 +     265029     265497         BE777875.1    est_human      human   704

  1 piece    Seq exons = (265029..265497)
 94% ident   Ref exons = (237..697)

     52 +     265029     265508         CA842909.1    est_human      human   537

  1 piece    Seq exons = (265029..265508)
 96% ident   Ref exons = (484..5)

     53 +     265029     265508         CA848367.1    est_human      human   580

  1 piece    Seq exons = (265029..265508)
 96% ident   Ref exons = (481..2)

     54 +     265029     265509         BM663698.1    est_human      human   530

  1 piece    Seq exons = (265029..265509)
 97% ident   Ref exons = (504..24)

     55 +     265032     265505         BU617523.1    est_human      human   678

  1 piece    Seq exons = (265032..265505)
 97% ident   Ref exons = (488..15)

     56 +     299109     299499         BG431120.1    est_human      human   683

  1 piece    Seq exons = (299109..299499)
 98% ident   Ref exons = (384..1)

     57 -     310769     312877         AI633959.1    est_human      human   340

  2 pieces   Seq exons = (310769..310941,312725..312877)
 95% ident   Ref exons = (15..187,188..340)

     58 +     312189     382603         BU920543.1    est_mouse      mouse   600

  4 pieces   Seq exons = (312189..312402,374067..374207,377376..377454,
                          382497..382603)
 93% ident   Ref exons = (61..276,277..414,415..493,494..600)

     59 +     312189     413411         BQ425643.1    est_human      human   899

  5 pieces   Seq exons = (312189..312423,407664..407771,409402..409513,
                          412760..412877,413307..413411)
 97% ident   Ref exons = (84..318,319..426,427..538,539..656,657..762)

     60 +     313275     378153         BU161513.1    est_human      human   848

  4 pieces   Seq exons = (313275..313392,374067..374207,377376..377454,
                          378101..378153)
100% ident   Ref exons = (1..118,119..259,260..338,339..391)

     61 +     313293     452411         BC001765.1    mgc_human      human  4197

 33 pieces   Seq exons = (313293..313392,374067..374207,377376..377454,
                          382497..382661,389063..389159,394105..394181,
                          396700..396904,398890..399041,400541..400614,
                          401722..401845,402657..402755,402851..402930,
                          407664..407771,409402..409513,412760..412877,
                          413307..413410,414438..414530,414652..414741,
                          415384..415587,417412..417482,417711..417798,
                          417892..417972,420100..420192,422685..422859,
                          427868..428007,429493..429594,432916..433064,
                          434957..435085,438083..438306,442111..442300,
                          445554..445680,446908..446985,452110..452411)
 99% ident   Ref exons = (1..100,101..241,242..320,321..485,486..582,
                          583..659,660..864,865..1016,1017..1090,1091..1214,
                          1215..1313,1314..1393,1394..1501,1502..1613,
                          1614..1731,1732..1835,1836..1928,1929..2018,
                          2019..2222,2223..2293,2294..2381,2382..2462,
                          2463..2555,2556..2730,2731..2870,2871..2972,
                          2973..3121,3122..3250,3251..3474,3475..3664,
                          3665..3791,3792..3869,3870..4171)

     62 +     372901     382623         BG426054.1    est_human      human   851

  4 pieces   Seq exons = (372901..372967,374067..374207,377376..377454,
                          382497..382623)
 97% ident   Ref exons = (120..186,187..329,330..408,409..538)

     63 +     374066     433064         BQ212627.1    est_human      human   913

  8 pieces   Seq exons = (374066..374109,407664..407771,409402..409508,
                          415509..415587,417412..417449,427868..428007,
                          429493..429594,432916..433064)
 99% ident   Ref exons = (96..139,140..246,247..353,354..432,433..472,
                          486..627,628..729,730..886)

     64 +     374098     452231        NM_021465.1  refseq_mrna      mouse  3871

 32 pieces   Seq exons = (374098..374207,377376..377454,382497..382661,
                          389063..389159,394105..394181,396700..396904,
                          398890..399041,400541..400614,401722..401845,
                          402657..402755,402851..402930,407664..407771,
                          409402..409513,412760..412877,413307..413410,
                          414438..414530,414652..414741,415384..415587,
                          417412..417482,417711..417798,417892..417972,
                          420100..420192,422685..422859,427868..428007,
                          429493..429594,432916..433064,434957..435085,
                          438083..438306,442111..442300,445554..445680,
                          446908..446985,452110..452231)
 93% ident   Ref exons = (6..115,116..195,196..360,361..457,458..534,
                          535..739,740..891,892..965,966..1089,1090..1188,
                          1189..1268,1269..1376,1377..1488,1489..1606,
                          1607..1710,1711..1803,1804..1893,1894..2097,
                          2098..2170,2171..2256,2257..2336,2337..2430,
                          2431..2605,2606..2745,2746..2847,2848..2996,
                          2997..3125,3126..3348,3349..3539,3540..3666,
                          3667..3744,3745..3871)

     65 +     382500     398992         BU297686.1   est_others    unknown   780

  5 pieces   Seq exons = (382500..382661,389063..389159,394105..394181,
                          396700..396904,398890..398992)
 86% ident   Ref exons = (9..168,169..265,266..341,342..547,548..652)

     66 +     382568     389161         BU916787.1   est_others    unknown   894

  2 pieces   Seq exons = (382568..382661,389063..389161)
 83% ident   Ref exons = (494..587,588..686)

     67 +     394118     399007            ET63394    tigr_egad      mouse  4150

  3 pieces   Seq exons = (394118..394181,396700..396904,398890..399007)
 82% ident   Ref exons = (704..767,768..973,974..1090)

     68 +     396698     399011         AW653226.1   est_others    unknown   541

  2 pieces   Seq exons = (396698..396904,398890..399011)
 80% ident   Ref exons = (168..375,376..496)

     69 +     396698     399011            HT97612    tigr_egad      human  4337

  2 pieces   Seq exons = (396698..396904,398890..399011)
 80% ident   Ref exons = (870..1077,1078..1198)

     70 +     398977     399622         CB269226.1    est_human      human   645

  1 piece    Seq exons = (398977..399622)
 99% ident   Ref exons = (1..645)

     71 +     400539     401845         BG409731.1   est_others    unknown   645

  2 pieces   Seq exons = (400539..400614,401722..401845)
 89% ident   Ref exons = (166..241,242..365)

     72 +     401721     401841         BE844095.1    est_human      human   217

  1 piece    Seq exons = (401721..401841)
 85% ident   Ref exons = (216..96)

     73 +     401805     402225         BF748764.1    est_human      human   423

  1 piece    Seq exons = (401805..402225)
 94% ident   Ref exons = (1..419)

     74 +     402685     407771         BU395520.1   est_others    unknown   776

  3 pieces   Seq exons = (402685..402755,402851..402930,407664..407771)
 92% ident   Ref exons = (1..71,72..151,152..259)

     75 +     412758     412842           R29742.1    est_human      human   129

  1 piece    Seq exons = (412758..412842)
 91% ident   Ref exons = (48..129)

     76 +     417895     435056         CA511551.1   est_others        rat   742

  7 pieces   Seq exons = (417895..417972,420100..420212,422799..422859,
                          427868..428007,429493..429594,432916..433064,
                          434957..435056)
 94% ident   Ref exons = (1..77,78..188,189..251,252..391,392..493,494..642,
                          643..742)

     77 +     420118     429581         BU320780.1   est_others    unknown   817

  4 pieces   Seq exons = (420118..420192,422685..422859,427868..428007,
                          429493..429581)
 87% ident   Ref exons = (145..219,220..394,395..533,534..623)

     78 +     422765     453001           AK034759   riken_cdna      mouse  2158

 10 pieces   Seq exons = (422765..422859,427868..428007,429493..429594,
                          432916..433064,434957..435085,438083..438306,
                          442111..442300,445554..445680,446908..446985,
                          452110..453001)
 94% ident   Ref exons = (1..95,96..235,236..337,338..486,487..615,616..838,
                          839..1029,1030..1156,1157..1234,1235..2113)

     79 +     422806     435064         CB223429.1   est_others    unknown   555

  5 pieces   Seq exons = (422806..422859,427868..428007,429493..429594,
                          432916..433064,434957..435064)
 94% ident   Ref exons = (2..55,56..195,196..297,298..446,447..554)

     80 +     427881     433065         BU912515.1   est_others    unknown   859

  3 pieces   Seq exons = (427881..428007,429493..429594,432916..433065)
 84% ident   Ref exons = (1..126,127..228,229..378)

     81 +     429492     433065         CA987421.1   est_others    unknown   894

  2 pieces   Seq exons = (429492..429594,432916..433065)
 83% ident   Ref exons = (44..146,147..296)

     82 +     429500     435091         CB017626.1   est_others    unknown   417

  3 pieces   Seq exons = (429500..429594,432916..433064,434957..435091)
 88% ident   Ref exons = (1..94,95..244,245..380)

     83 +     434961     438204         BU113741.1   est_others    unknown   899

  2 pieces   Seq exons = (434961..435085,438083..438204)
 86% ident   Ref exons = (612..737,738..860)

     84 +     435030     445681         BG292495.1    est_human      human   868

  5 pieces   Seq exons = (435030..435085,438083..438306,442111..442300,
                          442390..442500,445554..445681)
 96% ident   Ref exons = (1..56,57..279,280..469,470..581,582..716)

     85 +     438090     442231         AL852546.1   est_others    unknown   673

  2 pieces   Seq exons = (438090..438288,442111..442231)
 82% ident   Ref exons = (352..550,551..671)

     86 +     438090     442231         AL875246.1   est_others    unknown   677

  2 pieces   Seq exons = (438090..438288,442111..442231)
 82% ident   Ref exons = (352..550,551..671)

     87 +     438095     442300         BG512947.1   est_others    unknown   552

  2 pieces   Seq exons = (438095..438288,442111..442300)
 81% ident   Ref exons = (32..225,226..415)

     88 +     438131     445597         AV711824.1    est_human      human   356

  4 pieces   Seq exons = (438131..438306,442111..442216,442269..442300,
                          445554..445597)
100% ident   Ref exons = (1..176,177..281,282..312,313..356)

     89 +     438135     442237         BU111034.1   est_others    unknown   630

  2 pieces   Seq exons = (438135..438288,442111..442237)
 82% ident   Ref exons = (2..156,157..282)

     90 +     438143     442237         BU314675.1   est_others    unknown   722

  2 pieces   Seq exons = (438143..438288,442111..442237)
 82% ident   Ref exons = (1..147,148..273)

     91 +     438189     446985         BG619486.1    est_human      human   624

  5 pieces   Seq exons = (438189..438306,442111..442300,442390..442500,
                          445554..445680,446908..446985)
 99% ident   Ref exons = (1..118,119..308,309..419,420..547,548..624)

     92 +     438247     442479         AA117349.1    est_mouse      mouse   340

  3 pieces   Seq exons = (438247..438306,442111..442300,442390..442479)
 95% ident   Ref exons = (1..59,60..250,251..340)

     93 +     438255     446954         AW744277.1    est_mouse      mouse   527

  5 pieces   Seq exons = (438255..438306,442111..442300,442390..442500,
                          445554..445680,446908..446954)
 95% ident   Ref exons = (1..51,52..242,243..353,354..480,481..527)

     94 +     442122     452411         BQ225502.1    est_human      human   836

  5 pieces   Seq exons = (442122..442300,442390..442500,445554..445680,
                          446908..446985,452110..452411)
 99% ident   Ref exons = (1..179,180..290,291..417,418..495,496..802)

     95 +     442131     452392         BU593496.2    est_mouse      mouse   959

  5 pieces   Seq exons = (442131..442300,442390..442500,445554..445680,
                          446908..446985,452110..452392)
 94% ident   Ref exons = (50..219,220..330,331..457,458..536,537..826)

     96 +     442401     445676         CB233025.1    est_mouse      mouse  1082

  2 pieces   Seq exons = (442401..442500,445554..445676)
 98% ident   Ref exons = (3..102,103..225)

     97 +     445550     452254         BU362408.1   est_others    unknown   783

  3 pieces   Seq exons = (445550..445680,446908..446985,452110..452254)
 88% ident   Ref exons = (379..507,508..587,588..739)

     98 +     445550     452306         BU240901.1   est_others    unknown   756

  3 pieces   Seq exons = (445550..445680,446908..446985,452110..452306)
 87% ident   Ref exons = (350..478,479..558,559..756)

     99 +     445550     452379         AJ399342.1   est_others    unknown   647

  3 pieces   Seq exons = (445550..445680,446908..446985,452110..452379)
 88% ident   Ref exons = (77..205,206..285,286..576)

    100 +     445557     452214         BF397032.1   est_others        rat   381

  3 pieces   Seq exons = (445557..445680,446908..446985,452110..452214)
 91% ident   Ref exons = (325..202,201..124,123..15)

    101 +     445593     452540         AL120830.1    est_human      human   595

  3 pieces   Seq exons = (445593..445680,446908..446985,452110..452540)
 97% ident   Ref exons = (1..88,89..166,167..594)

    102 +     445609     452326         BI290325.1   est_others        rat   385

  3 pieces   Seq exons = (445609..445680,446908..446985,452110..452326)
 95% ident   Ref exons = (385..314,313..236,235..17)

    103 +     446903     452411         BF434878.1    est_human      human   397

  3 pieces   Seq exons = (446903..446985,452110..452273,452288..452411)
100% ident   Ref exons = (378..297,296..134,134..9)

    104 +     448201     448406         BF831033.1    est_human      human   342

  1 piece    Seq exons = (448201..448406)
 98% ident   Ref exons = (223..19)

    105 +     452202     452843         BE869836.1    est_human      human   946

  1 piece    Seq exons = (452202..452843)
 91% ident   Ref exons = (1..643)

    106 +     452309     453001         BQ210008.1   est_others        rat   728

  1 piece    Seq exons = (452309..453001)
 88% ident   Ref exons = (723..47)

    107 +     452321     452855         AA307624.1    est_human      human   534

  1 piece    Seq exons = (452321..452855)
 93% ident   Ref exons = (1..534)

    108 +     452443     452937         AI179285.1   est_others    unknown   527

  1 piece    Seq exons = (452443..452937)
 92% ident   Ref exons = (499..9)

    109 +     452443     453332         BQ067900.1    est_human      human  1045

  1 piece    Seq exons = (452443..453332)
 93% ident   Ref exons = (23..916)

    110 +     452474     453360         BM452406.1    est_human      human  1056

  1 piece    Seq exons = (452474..453360)
 94% ident   Ref exons = (1..891)

    111 +     452478     453188         BI109068.1    est_mouse      mouse   736

  1 piece    Seq exons = (452478..453188)
 89% ident   Ref exons = (22..724)

    112 +     452493     453277         AV713595.1    est_human      human   701

  2 pieces   Seq exons = (452493..453159,453244..453277)
 96% ident   Ref exons = (1..665,666..701)

    113 +     452593     453364         BG622150.1    est_human      human   778

  1 piece    Seq exons = (452593..453364)
 92% ident   Ref exons = (1..777)

    114 +     452708     453577         BQ721176.1    est_human      human   904

  1 piece    Seq exons = (452708..453577)
 93% ident   Ref exons = (1..875)

    115 +     452716     453445         BE371823.1    est_mouse      mouse  1015

  1 piece    Seq exons = (452716..453445)
 88% ident   Ref exons = (1..733)

    116 +     452788     453476         CA976388.1    est_mouse      mouse   986

  1 piece    Seq exons = (452788..453476)
 91% ident   Ref exons = (1..686)

--------------------------------------------------------------------------------
PERCEVAL Exon Candidates (76 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

      1 -      17179      17374   2   Internal    196    97   Excellent
      2 -      17930      18030   0   Internal    101    78        Good
      3 -      18643      18740   0    Initial     98    92   Excellent
      4 -      22621      22659   0   Terminal     39    93   Excellent
      5 -      23206      23298   0   Internal     93   100   Excellent
      6 -      34450      34570   2   Internal    121    76        Good
      7 -      37638      37739   0    Initial    102    82        Good
      8 -      38066      38250   1   Internal    185    56    Marginal
      9 -      45447      45529   1   Terminal     83    83        Good
     10 -      47557      47690   2   Internal    134    98   Excellent
     11 -      48257      48378   0   Internal    122    96   Excellent
     12 -      55723      55783   0    Initial     61    40        Poor
     13 -      58394      58485   1   Internal     92    89        Good
     14 -      83324      83419   2   Internal     96    59    Marginal
     15 -      84488      84568   2   Internal     81    64    Marginal
     16 -      84570      84797   0    Initial    228    59    Marginal
     17 +     100096     100209   2   Internal    114    81        Good
     18 +     136585     136876   2   Terminal    292    79        Good
     19 +     142994     143137   1   Internal    144    91   Excellent
     20 -     151545     151760   0     Single    216    63    Marginal
     21 +     166876     167082   0   Internal    207    49    Marginal
     22 -     205625     205777   1   Internal    153    99   Excellent
     23 -     207132     207199   1   Terminal     68    83        Good
     24 +     211165     211274   2   Internal    110   100   Excellent
     25 -     232927     233049   1   Internal    123    71        Good
     26 +     237167     237535   1   Internal    369    93   Excellent
     27 +     240155     240254   1   Internal    100    87        Good
     28 +     252029     252208   1   Internal    180   100   Excellent
     29 +     258524     258717   1   Terminal    194    87        Good
     30 +     265033     265142   1   Internal    110    51    Marginal
     31 +     266612     266773   0     Single    162    77        Good
     32 -     274792     274939   0   Internal    148    82        Good
     33 -     295260     295302   2   Terminal     43    92   Excellent
     34 +     299309     299488   0   Terminal    180    58    Marginal
     35 -     310783     310941   0   Terminal    159    66    Marginal
     36 -     314623     314656   2   Terminal     34    85        Good
     37 +     326890     326941   2   Terminal     52    82        Good
     38 +     336519     336647   2   Internal    129    50    Marginal
     39 +     337911     337941   0    Initial     31    41    Marginal
     40 -     354132     354165   2   Terminal     34    51    Marginal
     41 -     365656     365778   0   Internal    123    70        Good
     42 -     367949     368010   0    Initial     62    45    Marginal
     43 -     375698     375850   0   Terminal    153    47    Marginal
     44 -     376926     377080   1   Internal    155    98   Excellent
     45 +     382491     382661   0    Initial    171   100   Excellent
     46 +     389063     389159   0   Internal     97    91   Excellent
     47 +     394105     394181   1   Internal     77    97   Excellent
     48 +     396700     396904   0   Internal    205    79        Good
     49 +     398890     399086   1   Internal    197    98   Excellent
     50 +     401722     401845   2   Internal    124    91   Excellent
     51 +     402657     402755   0   Internal     99   100   Excellent
     52 +     402851     402930   0   Internal     80    80        Good
     53 +     407664     407771   2   Internal    108    93   Excellent
     54 +     409402     409477   2   Internal     76    75        Good
     55 +     412760     412885   0   Internal    126   100   Excellent
     56 +     414438     414530   0   Internal     93   100   Excellent
     57 +     414652     414741   0   Internal     90    94   Excellent
     58 +     415384     415587   0   Internal    204    67    Marginal
     59 +     417412     417486   0   Terminal     75   100   Excellent
     60 +     420082     420192   0    Initial    111    91   Excellent
     61 +     422685     422859   0   Internal    175   100   Excellent
     62 +     427868     428007   1   Internal    140   100   Excellent
     63 +     429493     429594   0   Internal    102   100   Excellent
     64 +     432916     433064   0   Internal    149   100   Excellent
     65 +     434957     435089   2   Internal    133    93   Excellent
     66 +     438043     438306   1   Internal    264    75        Good
     67 +     442111     442300   1   Internal    190    91   Excellent
     68 +     442413     442500   1   Internal     88    81        Good
     69 +     443806     443850   0   Terminal     45    64    Marginal
     70 +     445554     445680   2   Internal    127    97   Excellent
     71 +     446908     446985   0   Internal     78    88        Good
     72 +     447375     447426   0    Initial     52    40        Poor
     73 +     448278     448399   1   Terminal    122    53    Marginal
     74 +     452771     452860   0   Terminal     90    72        Good
     75 -     482559     482806   1   Terminal    248    62    Marginal
     76 -     483935     484117   1   Internal    183    66    Marginal
--------------------------------------------------------------------------------
# Output_end: pretty

gc_object_end: gene_grailexp --organism human --output pretty --dbpat grailexp_v3