gc_object_start: gene_grailexp --organism human --output pretty --dbpat grailexp_v3 # Service: gene_grailexp # Version: 3.3 # Description: GAT GrailEXP Gene Prediction Service # Last Modified: October, 2001 # Tool: GrailEXP 3.3 from ORNL. Last updated: October, 2001. # Database: GrailEXP Database Thu Feb 27 16:15:37 EST 2003 from NCBI/TIGR/Baylor/Riken (15960696 entries). Last updated: Thu Feb 27 16:15:37 2003. # Sequence Name: >gene_grailexp|PID=29088 # Sequence Length: 499950 # Output_begin: pretty -------------------------------------------------------------------------------- GrailEXP v3.31 [March, 2002] http://compbio.ornl.gov/grailexp/ Authors: Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and Edward C. Uberbacher, 1996-2001 Reference: "Automated Gene Identification in Large-Scale Genomic Sequences", Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4, Number 3, 1997 Sequence: >gene_grailexp|PID=29088 (499950 bp) -------------------------------------------------------------------------------- GAWAIN Gene Predictions (9 predicted, 7 with database similarity) Genes with Database Similarity (7 predicted, 1 with alternative splices) Gene 1, Variant 1 Strand: - Bounds: 17128-18717 Exons: 2 Start Codon: No Stop Codon: Yes Top-Scoring Reference: BI102160.1 (655 bp) (88% id, 17180-18814) >mouse|BI102160.1|est_mouse|dbEST - gi|14553053|gb|BI102160.1|BI102160 602887930F1 NCI_CGAP_Kid14 Mus musculus cDNA clone IMAGE:5043223 5' Reference Path: CA558976.1 (621 bp) (91%, 17179-18717) BM828178.1 (482 bp) (100%, 17248-18815) ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr- 1.1.2 17128 17374 17128 17374 2 0 247 100 1.1.1 18643 18717 18643 18717 2 1 75 92 Gene 2, Variant 1 Strand: - Bounds: 19753-84590 Exons: 10 Start Codon: Yes Stop Codon: No Top-Scoring Reference: BG613947.1 (983 bp) (96% id, 38109-84590) >human|BG613947.1|est_human|dbEST - gi|13665318|gb|BG613947.1|BG613947 602641666F1 NIH_MGC_61 Homo sapiens cDNA clone IMAGE:4772680 5' Reference Path: AW975158.1 (624 bp) (98%, 19753-47669) BG613947.1 (983 bp) (96%, 38109-84590) ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr- 2.1.10 19753 19851 19753 19851 0 0 99 100 2.1.9 23206 23298 23206 23298 0 0 93 98 2.1.8 38084 38250 38084 38250 1 2 167 100 2.1.7 47557 47690 47557 47690 2 2 134 100 2.1.6 48257 48378 48257 48378 0 0 122 100 2.1.5 49217 49287 49217 49287 1 2 71 100 2.1.4 54990 55029 54990 55026 0 0 40 100 2.1.3 58386 58485 ... ... 2 1 100 100 2.1.2 64386 64444 ... ... 0 2 59 100 2.1.1 84488 84590 ... ... 2 2 103 100 Gene 3, Variant 1 Strand: + Bounds: 136543-137071 Exons: 1 Start Codon: No Stop Codon: Yes Top-Scoring Reference: BQ889897.1 (1008 bp) (85% id, 136545-137071) >human|BQ889897.1|est_human|dbEST - gi|22281911|gb|BQ889897.1|BQ889897 AGENCOURT_8712298 NIH_MGC_112 Homo sapiens cDNA clone IMAGE:6295239 5 ' Reference Path: BF966953.2 (764 bp) (84%, 136543-137071) ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr- 3.1.1 136543 137071 136543 136876 2 1 529 86 Gene 4, Variant 1 Strand: + Bounds: 211563-259323 Exons: 7 Start Codon: Yes Stop Codon: Yes Top-Scoring Reference: U45880 (2540 bp) (97% id, 237167-259323) >human|U45880|baylor_ht|U45880|HSU45880 Human X-linked inhibitor of ap otosis protein XIAP mRNA, complete cds Reference Path: BQ423165.1 (852 bp) (99%, 211563-237524) U45880 (2540 bp) (97%, 237167-259323) ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr- 4.1.1 211563 211829 ... ... 1 1 267 100 4.1.2 237167 238075 237199 238075 1 0 909 100 4.1.3 240155 240254 240155 240254 1 0 100 100 4.1.4 242774 242852 242774 242852 2 2 79 100 4.1.5 244267 244309 244267 244309 0 0 43 100 4.1.6 252029 252229 252029 252229 1 0 201 100 4.1.7 258524 259323 258524 258717 1 0 800 97 PolyA 259149 259154 ... ... . . 6 79 Gene 5, Variant 1 Strand: + Bounds: 265029-265509 Exons: 1 Start Codon: No Stop Codon: Yes Top-Scoring Reference: BM663698.1 (530 bp) (97% id, 265029-265509) >human|BM663698.1|est_human|dbEST - gi|18969254|gb|BM663698.1|BM663698 UI-E-CK0-aaw-d-02-0-UI.s1 UI-E-CK0 Homo sapiens cDNA clone UI-E-CK0-a aw-d-02-0-UI 3' Reference Path: BM663698.1 (530 bp) (97%, 265029-265509) ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr- 5.1.1 265029 265509 265029 265154 0 2 481 97 PolyA 265548 265553 ... ... . . 6 65 Gene 6, Variant 1 Strand: + Bounds: 299109-299499 Exons: 1 Start Codon: Yes Stop Codon: Yes Top-Scoring Reference: BG431120.1 (683 bp) (98% id, 299109-299499) >human|BG431120.1|est_human|dbEST - gi|13337626|gb|BG431120.1|BG431120 602498746F1 NIH_MGC_75 Homo sapiens cDNA clone IMAGE:4612378 5' Reference Path: BG431120.1 (683 bp) (98%, 299109-299499) ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr- 6.1.1 299109 299499 299336 299488 1 1 391 98 Gene 7, Variant 1 Strand: + Bounds: 313275-453001 Exons: 34 Start Codon: Yes Stop Codon: Yes Top-Scoring Reference: BC001765.1 (4197 bp) (98% id, 313293-442300) >human|BC001765.1|mgc_human|MGC/NCI - gi|12804678|gb|BC001765.1|BC0017 65 Homo sapiens, Similar to stromal antigen 2, clone MGC:1282 IMAGE:33 52347, mRNA, complete cds Reference Path: BU161513.1 (848 bp) (100%, 313275-377454) BC001765.1 (4197 bp) (98%, 313293-442300) BQ225502.1 (836 bp) (98%, 442122-452411) AK034759 (2158 bp) (91%, 445554-453001) BQ721176.1 (904 bp) (93%, 452708-453577) ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr- 7.1.1 313275 313392 ... ... 1 1 118 100 7.1.2 374067 374207 374164 374207 2 0 141 100 7.1.3 377376 377454 377376 377454 2 0 79 100 7.1.4 382497 382661 382497 382661 0 2 165 100 7.1.5 389063 389159 389063 389159 0 1 97 100 7.1.6 394105 394181 394105 394181 1 2 77 100 7.1.7 396700 396904 396700 396904 0 0 205 100 7.1.8 398890 399041 398890 399041 1 2 152 100 7.1.9 400541 400614 400541 400614 0 1 74 100 7.1.10 401722 401845 401722 401845 2 1 124 100 7.1.11 402657 402755 402657 402755 0 2 99 100 7.1.12 402851 402930 402851 402930 0 1 80 100 7.1.13 407664 407771 407664 407771 2 0 108 100 7.1.14 409402 409513 409402 409513 2 1 112 93 7.1.15 412760 412877 412760 412877 0 1 118 100 7.1.16 413307 413410 413307 413410 1 1 104 100 7.1.17 414438 414530 414438 414530 0 2 93 100 7.1.18 414652 414741 414652 414741 0 0 90 100 7.1.19 415384 415587 415384 415587 0 0 204 100 7.1.20 417412 417482 417412 417482 0 0 71 100 7.1.21 417711 417798 417711 417798 2 0 88 100 7.1.22 417892 417972 417892 417972 0 0 81 100 7.1.23 420100 420192 420100 420192 0 0 93 100 7.1.24 422685 422859 422685 422859 0 2 175 100 7.1.25 427868 428007 427868 428007 1 0 140 100 7.1.26 429493 429594 429493 429594 0 0 102 100 7.1.27 432916 433064 432916 433064 0 0 149 100 7.1.28 434957 435085 434957 435085 2 2 129 100 7.1.29 438083 438306 438083 438306 2 2 224 100 7.1.30 442111 442300 442111 442300 1 2 190 100 7.1.31 442390 442500 442390 442500 2 1 111 100 7.1.32 445554 445680 445554 445680 2 0 127 100 7.1.33 446908 446985 446908 446985 0 0 78 100 7.1.34 452110 453001 452110 452133 0 0 892 100 PolyA 454015 454020 ... ... . . 6 87 Gene 7, Variant 2 Strand: + Bounds: 313275-453001 Exons: 33 Start Codon: Yes Stop Codon: Yes Top-Scoring Reference: BC001765.1 (4197 bp) (98% id, 313293-452411) >human|BC001765.1|mgc_human|MGC/NCI - gi|12804678|gb|BC001765.1|BC0017 65 Homo sapiens, Similar to stromal antigen 2, clone MGC:1282 IMAGE:33 52347, mRNA, complete cds Reference Path: BU161513.1 (848 bp) (100%, 313275-377454) BC001765.1 (4197 bp) (98%, 313293-452411) AK034759 (2158 bp) (91%, 422765-453001) BQ721176.1 (904 bp) (93%, 452708-453577) ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr- 7.2.1 313275 313392 ... ... 1 1 118 100 7.2.2 374067 374207 374164 374207 2 0 141 100 7.2.3 377376 377454 377376 377454 2 0 79 100 7.2.4 382497 382661 382497 382661 0 2 165 100 7.2.5 389063 389159 389063 389159 0 1 97 100 7.2.6 394105 394181 394105 394181 1 2 77 100 7.2.7 396700 396904 396700 396904 0 0 205 100 7.2.8 398890 399041 398890 399041 1 2 152 100 7.2.9 400541 400614 400541 400614 0 1 74 100 7.2.10 401722 401845 401722 401845 2 1 124 100 7.2.11 402657 402755 402657 402755 0 2 99 100 7.2.12 402851 402930 402851 402930 0 1 80 100 7.2.13 407664 407771 407664 407771 2 0 108 100 7.2.14 409402 409513 409402 409513 2 1 112 93 7.2.15 412760 412877 412760 412877 0 1 118 100 7.2.16 413307 413410 413307 413410 1 1 104 100 7.2.17 414438 414530 414438 414530 0 2 93 100 7.2.18 414652 414741 414652 414741 0 0 90 100 7.2.19 415384 415587 415384 415587 0 0 204 100 7.2.20 417412 417482 417412 417482 0 0 71 100 7.2.21 417711 417798 417711 417798 2 0 88 100 7.2.22 417892 417972 417892 417972 0 0 81 100 7.2.23 420100 420192 420100 420192 0 0 93 100 7.2.24 422685 422859 422685 422859 0 2 175 100 7.2.25 427868 428007 427868 428007 1 0 140 100 7.2.26 429493 429594 429493 429594 0 0 102 100 7.2.27 432916 433064 432916 433064 0 0 149 100 7.2.28 434957 435085 434957 435085 2 2 129 100 7.2.29 438083 438306 438083 438306 2 2 224 100 7.2.30 442111 442300 442111 442300 1 2 190 100 7.2.31 445554 445680 445554 445680 2 0 127 100 7.2.32 446908 446985 446908 446985 0 0 78 100 7.2.33 452110 453001 452110 452133 0 0 892 100 PolyA 454015 454020 ... ... . . 6 87 Gene 7, Variant 3 Strand: + Bounds: 313275-453001 Exons: 34 Start Codon: Yes Stop Codon: Yes Top-Scoring Reference: BC001765.1 (4197 bp) (98% id, 313293-452411) >human|BC001765.1|mgc_human|MGC/NCI - gi|12804678|gb|BC001765.1|BC0017 65 Homo sapiens, Similar to stromal antigen 2, clone MGC:1282 IMAGE:33 52347, mRNA, complete cds Reference Path: BU161513.1 (848 bp) (100%, 313275-377454) BC001765.1 (4197 bp) (98%, 313293-452411) AK034759 (2158 bp) (91%, 422765-453001) BQ721176.1 (904 bp) (93%, 452708-453577) ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr- 7.3.1 313275 313392 ... ... 1 1 118 100 7.3.2 374067 374207 374164 374207 2 0 141 100 7.3.3 377376 377454 377376 377454 2 0 79 100 7.3.4 382497 382661 382497 382661 0 2 165 100 7.3.5 389063 389159 389063 389159 0 1 97 100 7.3.6 394105 394181 394105 394181 1 2 77 100 7.3.7 396700 396904 396700 396904 0 0 205 100 7.3.8 398890 399041 398890 399041 1 2 152 100 7.3.9 400541 400614 400541 400614 0 1 74 100 7.3.10 401722 401845 401722 401845 2 1 124 100 7.3.11 402657 402755 402657 402755 0 2 99 100 7.3.12 402851 402930 402851 402930 0 1 80 100 7.3.13 407664 407771 407664 407771 2 0 108 100 7.3.14 409402 409513 409402 409513 2 1 112 93 7.3.15 412760 412877 412760 412877 0 1 118 100 7.3.16 413307 413410 413307 413410 1 1 104 100 7.3.17 414438 414530 414438 414530 0 2 93 100 7.3.18 414652 414741 414652 414741 0 0 90 100 7.3.19 415384 415587 415384 415587 0 0 204 100 7.3.20 417412 417482 417412 417482 0 0 71 100 7.3.21 417711 417798 417711 417798 2 0 88 100 7.3.22 417892 417972 417892 417972 0 0 81 100 7.3.23 420100 420192 420100 420192 0 0 93 100 7.3.24 422685 422859 422685 422859 0 2 175 100 7.3.25 427868 428007 427868 428007 1 0 140 100 7.3.26 429493 429594 429493 429594 0 0 102 100 7.3.27 432916 433064 432916 433064 0 0 149 100 7.3.28 434957 435085 434957 435085 2 2 129 100 7.3.29 438083 438306 438083 438306 2 2 224 100 7.3.30 442111 442216 442111 442114 2 1 106 100 7.3.31 442269 442300 ... ... 0 2 32 100 7.3.32 445554 445680 ... ... 2 0 127 100 7.3.33 446908 446985 ... ... 0 0 78 100 7.3.34 452110 453001 ... ... 0 0 892 100 >GrailEXP Gene 1, Var 1 mRNA|Similar to BI102160.1 tgcagcttcacacaagctaatagcccttgctatttgcaagctcattcatataactattgagcctctctac cgaagagttggagttcctaaaggtgctaaaggctcacctgttaatgctttgcaaaacaagagagcaccaa aacaagctgagagctttgaagatttgaggagagacgtgttcaatatgttctgttaccttggtcctcacct ttctcacgatcccattttatttgcaaaagtggtgcgcataggcaagtcatttatgaaggaggtaagtaag atttttcttacaaacctaaattttgaaatgaaaatattctga >GrailEXP Gene 1, Var 1 protein|Derived from similarity to BI102160.1 AASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQAESFEDLRRDVFNMFCYLGPHL SHDPILFAKVVRIGKSFMKEVSKIFLTNLNFEMKIF* >GrailEXP Gene 2, Var 1 mRNA|Similar to BG613947.1 acatccgggcttctgctactagtgagaggaagatggcggccgcggctgtggtggttcccgcagagtggat aaagaactgggagaaatcagggagaggcgaatttttgcatttatgtcggatcctcagtgaaaataaaagc catgatagttcaacatacagagatttccagcaagctctctatgagttgtcatatcatgtaattaaaggaa atctaaagcatgaacaggcatctaatgttcttagtgacattagtgtaagtatgatatgccctccattctt gctgatgtattctgcatattagacattgagacaaattgtttagaagaaaaaagcaagagagactatttta cacagttggtattagcatgtttgtatttagtttcagacacagttctaaaggaacgcctggatccagaaac actggaatcattagggcttatcaaacaatcacagcaattcaatcaaaagtcagttaaaatcaagacaaaa ctcttttataagcagcaaaaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctg aattggggcaagatttatctggaagtattactagtgatttaatcttagaaaatatcaaatctttaatagg atgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgcaggccagaacac gatgacttctttatatctttgttagaatcttacatgagtatgtgtgaaccgcaaacactgtgtcatattc ttgggttcaaattcaagttttaccaggaaccaaatggcgagacaccatcatctttatacagagttgcagc agtacttctacaatttaatcttattgatttagatgatctttatgtacatcttcttccggctgataattgc attatggatgaacacaaacgagaaattgcggaagctaagcaaattgttagaaagcttacgatggttgtgt tgtcttct >GrailEXP Gene 2, Var 1 protein|Derived from similarity to BG613947.1 MPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQSQQFNQKSV KIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGSITSDLILENIKSLIGCFNLDPNRVLDVILEVFE CRPEHDDFFISLLESYMSMCEPQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLL PADNCIMDEHKREIAEAKQIVRKLTMVVLSS >GrailEXP Gene 3, Var 1 mRNA|Similar to BQ889897.1 cacgtggaagctgaaactgcacctcccacgtggcccctctagccagctgagaacctcagataagaactac acccaggccagcaccagcagctcagccactagcagcagccccaccctctgcagctggctctcctgctgct gcactccgcggcagccaggtctgatggcccgggcggcaatcactgcagctggcatggctgtggactctgc tgtggggcacatactgggtcatgccatcagtgggagcttcagtggagtaaataatgctgagcccccaagt ggtgacatcacttaccagaagcctcagggaacccacccggcacagcagcagtaggctttcttgtatgaga taaaatggtttttggaatgtgcccagaatcagggagacataaagttctgtgagggtttccatgaggtggt gaaacagtgcagacttgcaaatggatttatctaatcaagaagttcaaattgaagaaatggaaaatcagct ctcacaactaagttaatttagcataaaaacataattgat >GrailEXP Gene 3, Var 1 protein|Derived from similarity to BQ889897.1 TWKLKLHLPRGPSSQLRTSDKNYTQASTSSSATSSSPTLCSWLSCCCTPRQPGLMARAAITAAGMAVDSA VGHILGHAISGSFSGVNNAEPPSGDITYQKPQGTHPAQQQ* >GrailEXP Gene 4, Var 1 mRNA|Similar to U45880 tgacggaccgcgcccggtgtctctttgaggccctgacgtggacacacttcgggtttcacgactccgggtt tctccaggggatgggccggccggtagaggcgcgtgagggagacgaagggacttccgtttccttcacctag gctggggccaagccgcagagcggagttggcatttccagattggggctcgggccgcgcctcctccgggacc ctccccttggaccgagccgatcgccgcggggcagttcgggccggctgtcctggcgcgaaaaggtggacaa gtcctattttcaagagaagatgacttttaacagttttgaaggatctaaaacttgtgtacctgcagacatc aataaggaagaagaatttgtagaagagtttaatagattaaaaacttttgctaattttccaagtggtagtc ctgtttcagcatcaacactggcacgagcagggtttctttatactggtgaaggagataccgtgcggtgctt tagttgtcatgcagctgtagatagatggcaatatggagactcagcagttggaagacacaggaaagtatcc ccaaattgcagatttatcaacggcttttatcttgaaaatagtgccacgcagtctacaaattctggtatcc agaatggtcagtacaaagttgaaaactatctgggaagcagagatcattttgccttagacaggccatctga gacacatgcagactatcttttgagaactgggcaggttgtagatatatcagacaccatatacccgaggaac cctgccatgtatagtgaagaagctagattaaagtcctttcagaactggccagactatgctcacctaaccc caagagagttagcaagtgctggactctactacacaggtattggtgaccaagtgcagtgcttttgttgtgg tggaaaactgaaaaattgggaaccttgtgatcgtgcctggtcagaacacaggcgacactttcctaattgc ttctttgttttgggccggaatcttaatattcgaagtgaatctgatgctgtgagttctgataggaatttcc caaattcaacaaatcttccaagaaatccatccatggcagattatgaagcacggatctttacttttgggac atggatatactcagttaacaaggagcagcttgcaagagctggattttatgctttaggtgaaggtgataaa gtaaagtgctttcactgtggaggagggctaactgattggaagcccagtgaagacccttgggaacaacatg ctaaatggtatccagggtgcaaatatctgttagaacagaagggacaagaatatataaacaatattcattt aactcattcacttgaggagtgtctggtaagaactactgagaaaacaccatcactaactagaagaattgat gataccatcttccaaaatcctatggtacaagaagctatacgaatggggttcagtttcaaggacattaaga aaataatggaggaaaaaattcagatatctgggagcaactataaatcacttgaggttctggttgcagatct agtgaatgctcagaaagacagtatgcaagatgagtcaagtcagacttcattacagaaagagattagtact gaagagcagctaaggcgcctgcaagaggagaagctttgcaaaatctgtatggatagaaatattgctatcg tttttgttccttgtggacatctagtcacttgtaaacaatgtgctgaagcagttgacaagtgtcccatgtg ctacacagtcattactttcaagcaaaaaatttttatgtcttaatctaactctatagtaggcatgttatgt tgttcttattaccctgattgaatgtgtgatgtgaactgactttaagtaatcaggattgaattccattagc atttgctaccaagtaggaaaaaaaatgtacatggcagtgttttagttggcaatataatctttgaatttct tgatttttcagggtattagctgtattatccattttttttactgttatttaattgaaaccatagactaaga ataagaagcatcatactataactgaacacaatgtgtattcatagtatactgatttaatttctaagtgtaa gtgaattaatcatctggattttttattcttttcagataggcttaacaaatggagctttctgtatataaat gtggagattagagttaatctccccaatcacataatttgttttgtgtgaaaaaggaataaattgttccatg ctggtggaaagatagagattgtttttagaggttggttgttgtgttttaggattctgtccattttctttta aagttataaacacgtacttgtgcgaattatttttttaaagtgatttgccatttttgaaagcgtatttaat gatagaatactatcgagcc >GrailEXP Gene 4, Var 1 protein|Derived from similarity to U45880 MTFNSFEGSKTCVPADINKEEEFVEEFNRLKTFANFPSGSPVSASTLARAGFLYTGEGDTVRCFSCHAAV DRWQYGDSAVGRHRKVSPNCRFINGFYLENSATQSTNSGIQNGQYKVENYLGSRDHFALDRPSETHADYL LRTGQVVDISDTIYPRNPAMYSEEARLKSFQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNW EPCDRAWSEHRRHFPNCFFVLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVN KEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEE CLVRTTEKTPSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKIMEEKIQISGSNYKSLEVLVADLVNAQKD SMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITF KQKIFMS* >GrailEXP Gene 5, Var 1 mRNA|Similar to BM663698.1 ttagacaaatgctacattaatgtttgggtggtcagattctactttgaatctgaagtttgcagatatgcct atagatttttggagtttaccactttcttattctgtatcattaatgtaatattttaaattactatatatgt taccatttttctggatttagtaagaaatttgcagttttggtttgatgtaacaagggttttaatgtaattt atgttagattttgcatttttttcattactgttatattttaacctgactgactgatctaattgtattagta ttgtgaataatcatgtgaaatgttttgagacagagtactatatttgtgaatataattttatggttttttt cacttagaacctttctgtgtggaaaactaagaaaattgctttctgctgtataatctggcattcattgtag attaaagcttatttttctgtgaataaaacgtattcaataaaatactattctttaaaattat >GrailEXP Gene 5, Var 1 protein|Derived from similarity to BM663698.1 LDKCYINVWVVRFYFESEVCRYAYRFLEFTTFLFCIINVIF* >GrailEXP Gene 6, Var 1 mRNA|Similar to BG431120.1 aaaagtctgcactgaaaaaataatgcaaatgtcatttgtctacacaaactaaccctatgacatgtttact taatacagataactagcatcaatggcagtgttaagtcatgatataattagttcctgataggaaacaatta ttttggctagtatttctcaaatgatttaggcagaaggtagtttttccttgaaatttccagatattcataa gtttcaactttgcttccatggagacaccaccattcagtgaaggctgtgcctctatatgcaaaagtacaca aaaaaagaaaactgaatggattatcaaaaaagacaaaatgaagttgttcactgtagttaccatcttgttt caggctaaaaagcatatatacctcatctaaaccctggctac >GrailEXP Gene 6, Var 1 protein|Derived from similarity to BG431120.1 METPPFSEGCASICKSTQKKKTEWIIKKDKMKLFTVVTILFQAKKHIYLI* >GrailEXP Gene 7, Var 1 mRNA|Similar to BC001765.1 ttcatgtgacgggcccctctgcttctcccccgccccatcatctccagcgcgtggtgggggaactgctggg gaaggcgattggcatcgatctctccatcccttccgaggcccgacttcggaattgtcttagaagaaagaag gcaagccaccattttacccacgtaaatatatgaatatatttctgacattgaggtgttccagaagatgata aagaaatgatagcagctccagaaataccaactgattttaatctactacaggagtcagaaacacatttttc ttctgacacagattttgaagatatcgaaggaaaaaaccaaaagcaaggcaaaggcaaaacttgtaaaaaa ggcaaaaagggcccagcagaaaagggcaaaggtggaaatggaggaggaaaacctccttctggtccaaacc gaatgaatggtcatcaccaacagaatggagtggaaaacatgatgttgtttgaagttgttaaaatgggcaa gagtgctatgcagtcggtggtagatgattggatagaatcatacaagcatgaccgagatatagcacttctt gaccttatcaacttttttattcagtgttcaggctgtaaaggagttgtcacagcagaaatgtttagacata tgcagaactctgagataattcgaaaaatgactgaagaattcgatgaggatagtggagattatccacttac catggctggtcctcagtggaagaagttcaaatccagtttttgtgaattcattggcgtgttagtacggcaa tgtcaatatagtatcatatatgatgagtatatgatggatacagtcatttcacttcttacaggattgtctg actcacaagtcagagcatttcgacatacaagcaccctggcagctatgaagttgatgacagctttggtgaa tgtggcactaaatcttagcattaatatggataatacacaaagacaatatgaagcagaacggaataaaatg attggaaaacgagccaatgagaggctagaactcctgctacaaaagcggaaagagcttcaggaaaatcaag atgaaatagaaaatatgatgaatgcaatatttaaaggagtgtttgtacatagataccgtgatgcgatagc tgaaattcgagctatttgcattgaagagattggcatttggatgaagatgtatagtgatgcctttcttaat gacagttatttaaaatatgttggttggactatgcatgataagcaaggtgaagtaagactcaaatgtctta ctgctctacaagggctttattataacaaagagcttaattccaaactggaactttttaccagtcggttcaa ggatagaattgtgtctatgacccttgacaaagaatatgatgttgcagtacaagcaataaaattactcact cttgttttacagagtagtgaagaagttctcactgcagaagattgtgaaaatgtctatcatctggtttatt cagctcaccggccagtagcagtagcagctggagaatttctctacaaaaagctcttcagtcgtagagatcc agaggaggatggaatgatgaaaagaagaggaagacaaggtccaaatgccaaccttgttaagacattggtt tttttctttctagaaagtgagttacatgagcatgcagcataccttgtggatagcatgtgggactgtgcta ctgagctgctgaaagactgggaatgtatgaatagcttgttactggaagagccacttagtggagaggaagc actaacagataggcaagagagtgctctgattgaaataatgctttgtaccattagacaagcggctgaatgt catcctcccgtgggaagagggacaggaaaaagggtgcttacagcaaaggagaagaagacacagttggatg ataggacaaaaatcactgagctttttgccgtggcccttcctcagttattagcaaaatactctgtagatgc agaaaaggtgactaacttgttgcagttgcctcagtactttgatttggaaatatataccactggacgatta gaaaagcatttggatgccttattgcgacagatccggaatattgtagagaagcacacagatacagatgttt tggaagcatgttctaaaacttaccatgcactctgtaatgaagagttcacaatcttcaacagagtagatat ttcaagaagtcaactgatagatgaattggcagataaatttaaccggcttcttgaagattttctgcaagag ggtgaagaacctgatgaagatgatgcatatcaggtattgtcaacattgaagaggatcactgcttttcata atgcccatgacctttcaaagtgggatttatttgcttgtaattacaaactcttgaaaactggaatcgaaaa tggagacatgcctgagcagattgttattcacgcactgcagtgtactcactatgtaatcctttggcaactt gctaagataactgaaagcagctctacaaaggaggacttgctgcgtttaaagaaacaaatgagagtatttt gtcagatatgtcaacattacctgaccaacgtgaatactactgttaaggaacaggccttcactattctgtg tgatattttgatgatcttcagccatcagattatgtcaggagggcgtgacatgttagagccattagtgtat acccctgattcttcattgcagtctgagttgctcagctttattttggatcatgtcttcattgaacaggatg atgataataatagtgcagatggtcagcaagaggatgaagccagtaaaattgaagctctgcacaagagaag aaatttacttgcagcattttgtaagctaattgtatatactgtggtggagatgaatacagctgcagatatc ttcaaacagtatatgaagtattataatgactatggagatatcatcaaagaaacaatgagtaaaacaaggc agatagacaaaattcagtgtgctaagacccttattctcagtctgcaacagctttttaatgaaatgataca agaaaatggctataattttgatagatcatcctctacatttagtggcataaaagaacttgctcgacgtttt gctttaacttttggacttgatcagttgaaaacaagagaagccattgccatgctacacaaagatggcatag aatttgcttttaaagagcctaatccgcaaggggagagccatccacctttaaatttggcatttcttgatat tctgagtgaattttcttctaaactacttcgacaagacaaaagaacagtgtatgtttacttggaaaagttc atgacctttcagatgtcactccgaagagaggatgtgtggcttccactgatgtcttaccgaaattctttgc tagctggtggtgatgatgacaccatgtcagtcattagtggaatcagcagccgggggtcaacagtacggag taaaaaatcaaaaccatctacaggaaaacggaaagtggttgagggcatgcagctttcactcactgaagaa agtagtagtagtgacagtatgtggttaagcagagaacaaacactgcacacccctgttatgatgcagacac cacaactcacctccactattatgagagagcccaaaagattacggcctgaggatagcttcatgagtgttta tccaatgcagactgaacatcatcaaacacctcttgattataacacgcaggtaacatggatgttagctcaa agacaacaagaggaagcaaggcaacagcaggagagagcagcaatgagctatgttaaactgcgaactaatc ttcagcatgccattcggcgtggcacaagcctaatggaagatgatgaagagccaattgtggaagatgttat gatgtcctcagaagggaggattgaggatcttaatgagggaatggattttgacaccatggatatagatttg ccaccatcaaagaacagacgagagagaacagaactgaagcctgatttctttgatccagcttcaattatgg atgaatcagttcttggagtgtcaatgttttaataccagtacacaattaaatctgtggtgaagtcattttc taagtggaagaggaaattttaaagtgtggtagatacagtgaaattctgtacagatttttctctaaggaga atatgacatgcttatgcttaccaagatcaagtgcattgaggggcagttttgtttgcctgaataaacgtaa aggacaagtaaacaatttgatgataagctacagtttttcttagaaagtaaatattttatttatgcgctgt tagttggcttttgaatcgattatttcatgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaatctgaa gaggcatttggtacagatatgaattctcttacatttatttactggttgtactaaataatgatgacctctg ctggatttctgtttacatccagaaaacaatgttaaggatgtatttattcccctaccctgaagaaagtgta ggatagaattgtttttagcattctaaatttaaatgcttaaaacgtcaatcaacaaaactttgttttaaat attgtaattgtggagaaaagtaaacttataagcagaacttttacaattttttcatctaaaagtattttaa gatatttttaaaatccaagagcttctctatacttttcagaaatatccagatgcagtgaactgccagaagg taaccagtctcaaacatgcttatcccattatcaaccctgaaagtttgcttgtcctttaagataaaaatgt aatgttgtgatattccttccagtaatgccactgtattttgtctccaaataaaagaagcttattgtagtat gtttgcagaaaaattctaaacaaaaattatacagcttattagagtgtgggaatagggatc >GrailEXP Gene 7, Var 1 protein|Derived from similarity to BC001765.1 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGGGKPPSGPNRM NGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQ NSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDS QVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDE IENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTA LQGLYYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATE LLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDR TKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIVEKHTDTDVLE ACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNA HDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQ ICQHYLTNVNTTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQI DKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEF AFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWLPLMSYRNSLLA GGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQ LTSTIMREPKRLRPEDSFMSVYPMQTEHHQTPLDYNTQVTWMLAQRQQEEARQQQERAAMSYVKLRTNLQ HAIRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDE SVLGVSMF* >GrailEXP Gene 7, Var 2 mRNA|Similar to BC001765.1 ttcatgtgacgggcccctctgcttctcccccgccccatcatctccagcgcgtggtgggggaactgctggg gaaggcgattggcatcgatctctccatcccttccgaggcccgacttcggaattgtcttagaagaaagaag gcaagccaccattttacccacgtaaatatatgaatatatttctgacattgaggtgttccagaagatgata aagaaatgatagcagctccagaaataccaactgattttaatctactacaggagtcagaaacacatttttc ttctgacacagattttgaagatatcgaaggaaaaaaccaaaagcaaggcaaaggcaaaacttgtaaaaaa ggcaaaaagggcccagcagaaaagggcaaaggtggaaatggaggaggaaaacctccttctggtccaaacc gaatgaatggtcatcaccaacagaatggagtggaaaacatgatgttgtttgaagttgttaaaatgggcaa gagtgctatgcagtcggtggtagatgattggatagaatcatacaagcatgaccgagatatagcacttctt gaccttatcaacttttttattcagtgttcaggctgtaaaggagttgtcacagcagaaatgtttagacata tgcagaactctgagataattcgaaaaatgactgaagaattcgatgaggatagtggagattatccacttac catggctggtcctcagtggaagaagttcaaatccagtttttgtgaattcattggcgtgttagtacggcaa tgtcaatatagtatcatatatgatgagtatatgatggatacagtcatttcacttcttacaggattgtctg actcacaagtcagagcatttcgacatacaagcaccctggcagctatgaagttgatgacagctttggtgaa tgtggcactaaatcttagcattaatatggataatacacaaagacaatatgaagcagaacggaataaaatg attggaaaacgagccaatgagaggctagaactcctgctacaaaagcggaaagagcttcaggaaaatcaag atgaaatagaaaatatgatgaatgcaatatttaaaggagtgtttgtacatagataccgtgatgcgatagc tgaaattcgagctatttgcattgaagagattggcatttggatgaagatgtatagtgatgcctttcttaat gacagttatttaaaatatgttggttggactatgcatgataagcaaggtgaagtaagactcaaatgtctta ctgctctacaagggctttattataacaaagagcttaattccaaactggaactttttaccagtcggttcaa ggatagaattgtgtctatgacccttgacaaagaatatgatgttgcagtacaagcaataaaattactcact cttgttttacagagtagtgaagaagttctcactgcagaagattgtgaaaatgtctatcatctggtttatt cagctcaccggccagtagcagtagcagctggagaatttctctacaaaaagctcttcagtcgtagagatcc agaggaggatggaatgatgaaaagaagaggaagacaaggtccaaatgccaaccttgttaagacattggtt tttttctttctagaaagtgagttacatgagcatgcagcataccttgtggatagcatgtgggactgtgcta ctgagctgctgaaagactgggaatgtatgaatagcttgttactggaagagccacttagtggagaggaagc actaacagataggcaagagagtgctctgattgaaataatgctttgtaccattagacaagcggctgaatgt catcctcccgtgggaagagggacaggaaaaagggtgcttacagcaaaggagaagaagacacagttggatg ataggacaaaaatcactgagctttttgccgtggcccttcctcagttattagcaaaatactctgtagatgc agaaaaggtgactaacttgttgcagttgcctcagtactttgatttggaaatatataccactggacgatta gaaaagcatttggatgccttattgcgacagatccggaatattgtagagaagcacacagatacagatgttt tggaagcatgttctaaaacttaccatgcactctgtaatgaagagttcacaatcttcaacagagtagatat ttcaagaagtcaactgatagatgaattggcagataaatttaaccggcttcttgaagattttctgcaagag ggtgaagaacctgatgaagatgatgcatatcaggtattgtcaacattgaagaggatcactgcttttcata atgcccatgacctttcaaagtgggatttatttgcttgtaattacaaactcttgaaaactggaatcgaaaa tggagacatgcctgagcagattgttattcacgcactgcagtgtactcactatgtaatcctttggcaactt gctaagataactgaaagcagctctacaaaggaggacttgctgcgtttaaagaaacaaatgagagtatttt gtcagatatgtcaacattacctgaccaacgtgaatactactgttaaggaacaggccttcactattctgtg tgatattttgatgatcttcagccatcagattatgtcaggagggcgtgacatgttagagccattagtgtat acccctgattcttcattgcagtctgagttgctcagctttattttggatcatgtcttcattgaacaggatg atgataataatagtgcagatggtcagcaagaggatgaagccagtaaaattgaagctctgcacaagagaag aaatttacttgcagcattttgtaagctaattgtatatactgtggtggagatgaatacagctgcagatatc ttcaaacagtatatgaagtattataatgactatggagatatcatcaaagaaacaatgagtaaaacaaggc agatagacaaaattcagtgtgctaagacccttattctcagtctgcaacagctttttaatgaaatgataca agaaaatggctataattttgatagatcatcctctacatttagtggcataaaagaacttgctcgacgtttt gctttaacttttggacttgatcagttgaaaacaagagaagccattgccatgctacacaaagatggcatag aatttgcttttaaagagcctaatccgcaaggggagagccatccacctttaaatttggcatttcttgatat tctgagtgaattttcttctaaactacttcgacaagacaaaagaacagtgtatgtttacttggaaaagttc atgacctttcagatgtcactccgaagagaggatgtgtggcttccactgatgtcttaccgaaattctttgc tagctggtggtgatgatgacaccatgtcagtcattagtggaatcagcagccgggggtcaacagtacggag taaaaaatcaaaaccatctacaggaaaacggaaagtggttgagggcatgcagctttcactcactgaagaa agtagtagtagtgacagtatgtggttaagcagagaacaaacactgcacacccctgttatgatgcagacac cacaactcacctccactattatgagagagcccaaaagattacggcctgaggatagcttcatgagtgttta tccaatgcagactgaacatcatcaaacacctcttgattataatcggcgtggcacaagcctaatggaagat gatgaagagccaattgtggaagatgttatgatgtcctcagaagggaggattgaggatcttaatgagggaa tggattttgacaccatggatatagatttgccaccatcaaagaacagacgagagagaacagaactgaagcc tgatttctttgatccagcttcaattatggatgaatcagttcttggagtgtcaatgttttaataccagtac acaattaaatctgtggtgaagtcattttctaagtggaagaggaaattttaaagtgtggtagatacagtga aattctgtacagatttttctctaaggagaatatgacatgcttatgcttaccaagatcaagtgcattgagg ggcagttttgtttgcctgaataaacgtaaaggacaagtaaacaatttgatgataagctacagtttttctt agaaagtaaatattttatttatgcgctgttagttggcttttgaatcgattatttcatgcnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnncaatctgaagaggcatttggtacagatatgaattctcttacatttattta ctggttgtactaaataatgatgacctctgctggatttctgtttacatccagaaaacaatgttaaggatgt atttattcccctaccctgaagaaagtgtaggatagaattgtttttagcattctaaatttaaatgcttaaa acgtcaatcaacaaaactttgttttaaatattgtaattgtggagaaaagtaaacttataagcagaacttt tacaattttttcatctaaaagtattttaagatatttttaaaatccaagagcttctctatacttttcagaa atatccagatgcagtgaactgccagaaggtaaccagtctcaaacatgcttatcccattatcaaccctgaa agtttgcttgtcctttaagataaaaatgtaatgttgtgatattccttccagtaatgccactgtattttgt ctccaaataaaagaagcttattgtagtatgtttgcagaaaaattctaaacaaaaattatacagcttatta gagtgtgggaatagggatc >GrailEXP Gene 7, Var 2 protein|Derived from similarity to BC001765.1 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGGGKPPSGPNRM NGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQ NSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDS QVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDE IENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTA LQGLYYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATE LLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDR TKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIVEKHTDTDVLE ACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNA HDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQ ICQHYLTNVNTTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQI DKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEF AFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWLPLMSYRNSLLA GGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQ LTSTIMREPKRLRPEDSFMSVYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMD FDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF* >GrailEXP Gene 7, Var 3 mRNA|Similar to BC001765.1 ttcatgtgacgggcccctctgcttctcccccgccccatcatctccagcgcgtggtgggggaactgctggg gaaggcgattggcatcgatctctccatcccttccgaggcccgacttcggaattgtcttagaagaaagaag gcaagccaccattttacccacgtaaatatatgaatatatttctgacattgaggtgttccagaagatgata aagaaatgatagcagctccagaaataccaactgattttaatctactacaggagtcagaaacacatttttc ttctgacacagattttgaagatatcgaaggaaaaaaccaaaagcaaggcaaaggcaaaacttgtaaaaaa ggcaaaaagggcccagcagaaaagggcaaaggtggaaatggaggaggaaaacctccttctggtccaaacc gaatgaatggtcatcaccaacagaatggagtggaaaacatgatgttgtttgaagttgttaaaatgggcaa gagtgctatgcagtcggtggtagatgattggatagaatcatacaagcatgaccgagatatagcacttctt gaccttatcaacttttttattcagtgttcaggctgtaaaggagttgtcacagcagaaatgtttagacata tgcagaactctgagataattcgaaaaatgactgaagaattcgatgaggatagtggagattatccacttac catggctggtcctcagtggaagaagttcaaatccagtttttgtgaattcattggcgtgttagtacggcaa tgtcaatatagtatcatatatgatgagtatatgatggatacagtcatttcacttcttacaggattgtctg actcacaagtcagagcatttcgacatacaagcaccctggcagctatgaagttgatgacagctttggtgaa tgtggcactaaatcttagcattaatatggataatacacaaagacaatatgaagcagaacggaataaaatg attggaaaacgagccaatgagaggctagaactcctgctacaaaagcggaaagagcttcaggaaaatcaag atgaaatagaaaatatgatgaatgcaatatttaaaggagtgtttgtacatagataccgtgatgcgatagc tgaaattcgagctatttgcattgaagagattggcatttggatgaagatgtatagtgatgcctttcttaat gacagttatttaaaatatgttggttggactatgcatgataagcaaggtgaagtaagactcaaatgtctta ctgctctacaagggctttattataacaaagagcttaattccaaactggaactttttaccagtcggttcaa ggatagaattgtgtctatgacccttgacaaagaatatgatgttgcagtacaagcaataaaattactcact cttgttttacagagtagtgaagaagttctcactgcagaagattgtgaaaatgtctatcatctggtttatt cagctcaccggccagtagcagtagcagctggagaatttctctacaaaaagctcttcagtcgtagagatcc agaggaggatggaatgatgaaaagaagaggaagacaaggtccaaatgccaaccttgttaagacattggtt tttttctttctagaaagtgagttacatgagcatgcagcataccttgtggatagcatgtgggactgtgcta ctgagctgctgaaagactgggaatgtatgaatagcttgttactggaagagccacttagtggagaggaagc actaacagataggcaagagagtgctctgattgaaataatgctttgtaccattagacaagcggctgaatgt catcctcccgtgggaagagggacaggaaaaagggtgcttacagcaaaggagaagaagacacagttggatg ataggacaaaaatcactgagctttttgccgtggcccttcctcagttattagcaaaatactctgtagatgc agaaaaggtgactaacttgttgcagttgcctcagtactttgatttggaaatatataccactggacgatta gaaaagcatttggatgccttattgcgacagatccggaatattgtagagaagcacacagatacagatgttt tggaagcatgttctaaaacttaccatgcactctgtaatgaagagttcacaatcttcaacagagtagatat ttcaagaagtcaactgatagatgaattggcagataaatttaaccggcttcttgaagattttctgcaagag ggtgaagaacctgatgaagatgatgcatatcaggtattgtcaacattgaagaggatcactgcttttcata atgcccatgacctttcaaagtgggatttatttgcttgtaattacaaactcttgaaaactggaatcgaaaa tggagacatgcctgagcagattgttattcacgcactgcagtgtactcactatgtaatcctttggcaactt gctaagataactgaaagcagctctacaaaggaggacttgctgcgtttaaagaaacaaatgagagtatttt gtcagatatgtcaacattacctgaccaacgtgaatactactgttaaggaacaggccttcactattctgtg tgatattttgatgatcttcagccatcagattatgtcaggagggcgtgacatgttagagccattagtgtat acccctgattcttcattgcagtctgagttgctcagctttattttggatcatgtcttcattgaacaggatg atgataataatagtgcagatggtcagcaagaggatgaagccagtaaaattgaagctctgcacaagagaag aaatttacttgcagcattttgtaagctaattgtatatactgtggtggagatgaatacagctgcagatatc ttcaaacagtatatgaagtattataatgactatggagatatcatcaaagaaacaatgagtaaaacaaggc agatagacaaaattcagtgtgctaagacccttattctcagtctgcaacagctttttaatgaaatgataca agaaaatggctataattttgatagatcatcctctacatttagtggcataaaagaacttgctcgacgtttt gctttaacttttggacttgatcagttgaaaacaagagaagccattgccatgctacacaaagatggcatag aatttgcttttaaagagcctaatccgcaaggggagagccatccacctttaaatttggcatttcttgatat tctgagtgaattttcttctaaactacttcgacaagacaaaagaacagtgtatgtttacttggaaaagttc atgacctttcagatgtcactccgaagagaggatgtgtggcttccactgatgtcttaccgaaattctttgc tagctggtggtgatgatgacaccatgtcagtcattagtggaatcagcagccgggggtcaacagtacggag taaaaaatcaaaaccatctacaggaaaacggaaagtggttgagggcatgcagctttcactcaxctgaaga aagtagtagtagtgacagtatgtggttaagcagagaacaaacactgcacacccctgttatgatgcagaca ccacaactcacctccactattatgagagaactgaacatcatcaaacacctcttgattataatcggcgtgg cacaagcctaatggaagatgatgaagagccaattgtggaagatgttatgatgtcctcagaagggaggatt gaggatcttaatgagggaatggattttgacaccatggatatagatttgccaccatcaaagaacagacgag agagaacagaactgaagcctgatttctttgatccagcttcaattatggatgaatcagttcttggagtgtc aatgttttaataccagtacacaattaaatctgtggtgaagtcattttctaagtggaagaggaaattttaa agtgtggtagatacagtgaaattctgtacagatttttctctaaggagaatatgacatgcttatgcttacc aagatcaagtgcattgaggggcagttttgtttgcctgaataaacgtaaaggacaagtaaacaatttgatg ataagctacagtttttcttagaaagtaaatattttatttatgcgctgttagttggcttttgaatcgatta tttcatgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaatctgaagaggcatttggtacagatatga attctcttacatttatttactggttgtactaaataatgatgacctctgctggatttctgtttacatccag aaaacaatgttaaggatgtatttattcccctaccctgaagaaagtgtaggatagaattgtttttagcatt ctaaatttaaatgcttaaaacgtcaatcaacaaaactttgttttaaatattgtaattgtggagaaaagta aacttataagcagaacttttacaattttttcatctaaaagtattttaagatatttttaaaatccaagagc ttctctatacttttcagaaatatccagatgcagtgaactgccagaaggtaaccagtctcaaacatgctta tcccattatcaaccctgaaagtttgcttgtcctttaagataaaaatgtaatgttgtgatattccttccag taatgccactgtattttgtctccaaataaaagaagcttattgtagtatgtttgcagaaaaattctaaaca aaaattatacagcttattagagtgtgggaatagggatc >GrailEXP Gene 7, Var 3 protein|Derived from similarity to BC001765.1 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGGGKPPSGPNRM NGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQ NSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDS QVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDE IENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTA LQGLYYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATE LLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDR TKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIVEKHTDTDVLE ACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNA HDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQ ICQHYLTNVNTTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQI DKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEF AFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWLPLMSYRNSLLA GGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQLSLX* Genes with No Database Evidence (2 predicted) Gene 8, Variant 1 Strand: - Bounds: 151545-151760 Exons: 1 Start Codon: Yes Stop Codon: Yes ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr- 8.1.1 151545 151760 151545 151760 0 1 216 63 Gene 9, Variant 1 Strand: - Bounds: 482559-482765 Exons: 1 Start Codon: Yes Stop Codon: Yes ---Index---- --------Exons-------- ---------CDS--------- -Ph- -Fr- -Len- -Scr- 9.1.1 482559 482765 482559 482765 0 1 207 60 >GrailEXP Gene 8, Var 1 mRNA atgacaccatggcacatcagtgccaaggacatgacccacgtatatacccacagagaacactttccaaacc agctcatggctagaccagggtttatggccaaccttcagctagacatactgagacagctgcccctcagata cctgcttatgcctccactaagggggcaggctttgctgagacaggatgtggacatctccctgctcaacaaa ccatga >GrailEXP Gene 8, Var 1 protein MTPWHISAKDMTHVYTHREHFPNQLMARPGFMANLQLDILRQLPLRYLLMPPLRGQALLRQDVDISLLNK P* >GrailEXP Gene 9, Var 1 mRNA atgataaatcatgtttcatccaaatatagtaacaaagaacgtaatgactataaagacaagaaagtgttag agacaagtaaggtaaccaaagctcatttgattctcattaagcaagcttcaaaaaaacagactttacagga atcctttaaggcaattccttattgtgttgagtctatggagtttaagaatctaaacaaaacttgttga >GrailEXP Gene 9, Var 1 protein MINHVSSKYSNKERNDYKDKKVLETSKVTKAHLILIKQASKKQTLQESFKAIPYCVESMEFKNLNKTC* -------------------------------------------------------------------------------- GALAHAD Gene Alignments (1256 located: 116 displayed, 1140 redundant) Index Std Begin End Accession Database Organism Length 1 - 17179 18717 CA558976.1 est_mouse mouse 621 2 pieces Seq exons = (17179..17374,18643..18717) 91% ident Ref exons = (271..76,75..1) 2 - 17180 18814 BI102160.1 est_mouse mouse 655 2 pieces Seq exons = (17180..17374,18643..18814) 88% ident Ref exons = (476..282,281..110) 3 - 17248 18815 BM828178.1 est_human human 482 2 pieces Seq exons = (17248..17374,18643..18815) 100% ident Ref exons = (482..355,354..182) 4 - 19753 38251 AA967531.1 est_mouse mouse 388 3 pieces Seq exons = (19753..19851,23206..23298,38084..38251) 92% ident Ref exons = (20..118,119..211,212..379) 5 - 19753 47598 AI639237.1 est_others rat 426 4 pieces Seq exons = (19753..19851,23206..23298,38084..38250,47557..47598) 92% ident Ref exons = (26..124,125..217,218..384,385..426) 6 - 19753 47669 AW975158.1 est_human human 624 4 pieces Seq exons = (19753..19851,23206..23298,38084..38250,47557..47669) 99% ident Ref exons = (153..251,252..344,345..511,512..624) 7 - 23224 84573 AU133454.1 est_human human 880 9 pieces Seq exons = (23224..23298,38084..38250,47557..47690,48257..48371, 49217..49287,54990..55029,58386..58485,64386..64444, 84488..84573) 98% ident Ref exons = (854..779,778..610,609..476,475..361,360..290, 289..248,247..146,145..87,86..1) 8 - 23236 49290 BI734910.1 est_mouse mouse 617 5 pieces Seq exons = (23236..23298,38084..38250,47557..47690,48257..48378, 49217..49290) 93% ident Ref exons = (617..555,554..388,387..253,252..131,130..58) 9 - 23268 64444 BG620462.1 est_human human 752 8 pieces Seq exons = (23268..23298,38084..38250,47557..47690,48257..48378, 49217..49287,54990..55029,58386..58485,64386..64444) 98% ident Ref exons = (751..721,720..553,552..419,418..297,296..226, 225..184,183..82,81..23) 10 - 37898 38236 AW081961.1 est_human human 560 1 piece Seq exons = (37898..38236) 99% ident Ref exons = (222..560) 11 - 38083 47667 BF548094.1 est_others rat 473 2 pieces Seq exons = (38083..38250,47557..47667) 91% ident Ref exons = (195..362,363..473) 12 - 38083 48377 BI661745.1 est_mouse mouse 756 3 pieces Seq exons = (38083..38250,47557..47690,48257..48377) 91% ident Ref exons = (421..254,253..121,120..1) 13 - 38083 48379 BU901820.1 est_others unknown 928 3 pieces Seq exons = (38083..38250,47557..47690,48257..48379) 80% ident Ref exons = (827..660,659..526,525..403) 14 - 38085 84579 AW044760.1 est_mouse mouse 790 8 pieces Seq exons = (38085..38250,47557..47690,48257..48378,49217..49287, 54990..55029,58386..58485,64386..64444,84488..84579) 91% ident Ref exons = (789..624,623..490,489..368,367..297,296..255, 254..153,152..94,93..2) 15 - 38109 84590 BG613947.1 est_human human 983 8 pieces Seq exons = (38109..38250,47557..47690,48257..48378,49217..49287, 54990..55029,58386..58485,64386..64444,84488..84590) 98% ident Ref exons = (782..637,636..502,501..380,379..309,308..267, 266..165,164..106,105..3) 16 - 47255 47662 R89769.1 est_human human 464 1 piece Seq exons = (47255..47662) 93% ident Ref exons = (415..1) 17 - 47329 47703 H78263.1 est_human human 423 1 piece Seq exons = (47329..47703) 95% ident Ref exons = (383..4) 18 - 47556 48376 AA859985.1 est_others rat 278 2 pieces Seq exons = (47556..47690,48257..48376) 91% ident Ref exons = (273..139,138..19) 19 - 47559 84588 BB631372.1 est_mouse mouse 628 7 pieces Seq exons = (47559..47690,48257..48378,49217..49287,54990..55029, 58386..58485,64386..64444,84488..84588) 91% ident Ref exons = (625..499,498..377,376..306,305..264,263..162, 161..103,102..2) 20 - 48140 48582 BG210315.1 est_human human 710 1 piece Seq exons = (48140..48582) 97% ident Ref exons = (237..679) 21 - 54990 64451 AK038135 riken_cdna mouse 1674 3 pieces Seq exons = (54990..55029,58386..58485,64386..64451) 89% ident Ref exons = (1655..1614,1613..1512,1511..1446) 22 + 136543 137058 BF966178.1 est_human human 866 1 piece Seq exons = (136543..137058) 84% ident Ref exons = (81..592) 23 + 136543 137071 BF966953.2 est_human human 764 1 piece Seq exons = (136543..137071) 84% ident Ref exons = (678..151) 24 + 136545 136866 AV588667.1 est_others unknown 582 1 piece Seq exons = (136545..136866) 81% ident Ref exons = (55..374) 25 + 136545 137035 BE752232.1 est_others unknown 538 1 piece Seq exons = (136545..137035) 79% ident Ref exons = (2..496) 26 + 136545 137035 BI681637.1 est_others unknown 580 1 piece Seq exons = (136545..137035) 79% ident Ref exons = (60..554) 27 + 136545 137071 W00667.1 est_human human 528 2 pieces Seq exons = (136545..136661,136877..137071) 84% ident Ref exons = (24..138,139..335) 28 - 136545 137071 BM463344.1 est_human human 655 2 pieces Seq exons = (136545..136657,136834..137071) 84% ident Ref exons = (57..167,168..407) 29 + 136545 137071 AV702108.1 est_human human 713 2 pieces Seq exons = (136545..136636,136697..137071) 84% ident Ref exons = (33..124,125..500) 30 + 136545 137071 BI668119.1 est_human human 785 2 pieces Seq exons = (136545..136661,136731..137071) 84% ident Ref exons = (75..195,196..533) 31 + 136545 137071 AL533242.1 est_human human 791 1 piece Seq exons = (136545..137071) 84% ident Ref exons = (43..567) 32 + 136545 137071 BC003079.1 mgc_human human 796 1 piece Seq exons = (136545..137071) 84% ident Ref exons = (53..577) 33 + 136545 137071 BE250573.1 est_human human 1001 1 piece Seq exons = (136545..137071) 84% ident Ref exons = (25..549) 34 + 136545 137071 BG121057.1 est_human human 1019 1 piece Seq exons = (136545..137071) 84% ident Ref exons = (40..564) 35 + 136545 137071 BM471726.1 est_human human 1048 1 piece Seq exons = (136545..137071) 84% ident Ref exons = (19..543) 36 - 136598 137071 AA112045.1 est_human human 436 2 pieces Seq exons = (136598..136724,136931..137071) 85% ident Ref exons = (102..225,226..368) 37 + 136622 136857 AA050224.1 est_mouse mouse 458 1 piece Seq exons = (136622..136857) 79% ident Ref exons = (101..334) 38 + 211300 252192 BM805359.1 est_human human 1177 5 pieces Seq exons = (211300..211441,240155..240254,242774..242852, 244267..244309,252029..252192) 98% ident Ref exons = (1..142,143..242,243..321,322..364,365..529) 39 + 211413 258699 AV706807.1 est_human human 716 6 pieces Seq exons = (211413..211441,211703..211829,240155..240254, 244267..244309,252029..252229,258524..258699) 98% ident Ref exons = (1..29,30..156,157..256,257..299,300..500,501..675) 40 + 211414 237666 AL713196.1 est_human human 529 2 pieces Seq exons = (211414..211441,237167..237666) 99% ident Ref exons = (2..29,30..529) 41 + 211563 237524 BQ423165.1 est_human human 852 2 pieces Seq exons = (211563..211829,237167..237524) 99% ident Ref exons = (24..290,291..656) 42 + 211784 258801 HT27798 tigr_egad human 1659 7 pieces Seq exons = (211784..211829,237167..238075,240155..240254, 242774..242852,244267..244309,252029..252229, 258524..258801) 99% ident Ref exons = (4..49,50..958,959..1058,1059..1137,1138..1180, 1181..1381,1382..1659) 43 + 236733 237216 BX119811.1 est_human human 484 1 piece Seq exons = (236733..237216) 100% ident Ref exons = (1..484) 44 + 237133 242845 ET62738 tigr_egad mouse 2691 3 pieces Seq exons = (237133..238075,240155..240254,242774..242845) 88% ident Ref exons = (606..1545,1546..1643,1644..1717) 45 + 237166 242845 NM_022231.1 refseq_mrna other 2468 3 pieces Seq exons = (237166..238075,240155..240254,242774..242845) 90% ident Ref exons = (297..1203,1204..1303,1304..1375) 46 + 237166 259323 U45880 baylor_ht human 2540 6 pieces Seq exons = (237166..238075,240155..240254,242774..242852, 244267..244309,252029..252229,258524..259323) 99% ident Ref exons = (1..910,911..1010,1011..1089,1090..1132,1133..1333, 1334..2133) 47 + 252028 258716 ET62738 tigr_egad mouse 2691 2 pieces Seq exons = (252028..252229,258524..258716) 90% ident Ref exons = (1767..1968,1969..2161) 48 + 252028 258825 NM_022231.1 refseq_mrna other 2468 2 pieces Seq exons = (252028..252229,258524..258825) 89% ident Ref exons = (1425..1626,1627..1925) 49 + 258521 258697 BB491005.1 est_mouse mouse 319 1 piece Seq exons = (258521..258697) 91% ident Ref exons = (142..318) 50 + 258521 258697 BB495446.1 est_mouse mouse 339 1 piece Seq exons = (258521..258697) 92% ident Ref exons = (163..339) 51 + 265029 265497 BE777875.1 est_human human 704 1 piece Seq exons = (265029..265497) 94% ident Ref exons = (237..697) 52 + 265029 265508 CA842909.1 est_human human 537 1 piece Seq exons = (265029..265508) 96% ident Ref exons = (484..5) 53 + 265029 265508 CA848367.1 est_human human 580 1 piece Seq exons = (265029..265508) 96% ident Ref exons = (481..2) 54 + 265029 265509 BM663698.1 est_human human 530 1 piece Seq exons = (265029..265509) 97% ident Ref exons = (504..24) 55 + 265032 265505 BU617523.1 est_human human 678 1 piece Seq exons = (265032..265505) 97% ident Ref exons = (488..15) 56 + 299109 299499 BG431120.1 est_human human 683 1 piece Seq exons = (299109..299499) 98% ident Ref exons = (384..1) 57 - 310769 312877 AI633959.1 est_human human 340 2 pieces Seq exons = (310769..310941,312725..312877) 95% ident Ref exons = (15..187,188..340) 58 + 312189 382603 BU920543.1 est_mouse mouse 600 4 pieces Seq exons = (312189..312402,374067..374207,377376..377454, 382497..382603) 93% ident Ref exons = (61..276,277..414,415..493,494..600) 59 + 312189 413411 BQ425643.1 est_human human 899 5 pieces Seq exons = (312189..312423,407664..407771,409402..409513, 412760..412877,413307..413411) 97% ident Ref exons = (84..318,319..426,427..538,539..656,657..762) 60 + 313275 378153 BU161513.1 est_human human 848 4 pieces Seq exons = (313275..313392,374067..374207,377376..377454, 378101..378153) 100% ident Ref exons = (1..118,119..259,260..338,339..391) 61 + 313293 452411 BC001765.1 mgc_human human 4197 33 pieces Seq exons = (313293..313392,374067..374207,377376..377454, 382497..382661,389063..389159,394105..394181, 396700..396904,398890..399041,400541..400614, 401722..401845,402657..402755,402851..402930, 407664..407771,409402..409513,412760..412877, 413307..413410,414438..414530,414652..414741, 415384..415587,417412..417482,417711..417798, 417892..417972,420100..420192,422685..422859, 427868..428007,429493..429594,432916..433064, 434957..435085,438083..438306,442111..442300, 445554..445680,446908..446985,452110..452411) 99% ident Ref exons = (1..100,101..241,242..320,321..485,486..582, 583..659,660..864,865..1016,1017..1090,1091..1214, 1215..1313,1314..1393,1394..1501,1502..1613, 1614..1731,1732..1835,1836..1928,1929..2018, 2019..2222,2223..2293,2294..2381,2382..2462, 2463..2555,2556..2730,2731..2870,2871..2972, 2973..3121,3122..3250,3251..3474,3475..3664, 3665..3791,3792..3869,3870..4171) 62 + 372901 382623 BG426054.1 est_human human 851 4 pieces Seq exons = (372901..372967,374067..374207,377376..377454, 382497..382623) 97% ident Ref exons = (120..186,187..329,330..408,409..538) 63 + 374066 433064 BQ212627.1 est_human human 913 8 pieces Seq exons = (374066..374109,407664..407771,409402..409508, 415509..415587,417412..417449,427868..428007, 429493..429594,432916..433064) 99% ident Ref exons = (96..139,140..246,247..353,354..432,433..472, 486..627,628..729,730..886) 64 + 374098 452231 NM_021465.1 refseq_mrna mouse 3871 32 pieces Seq exons = (374098..374207,377376..377454,382497..382661, 389063..389159,394105..394181,396700..396904, 398890..399041,400541..400614,401722..401845, 402657..402755,402851..402930,407664..407771, 409402..409513,412760..412877,413307..413410, 414438..414530,414652..414741,415384..415587, 417412..417482,417711..417798,417892..417972, 420100..420192,422685..422859,427868..428007, 429493..429594,432916..433064,434957..435085, 438083..438306,442111..442300,445554..445680, 446908..446985,452110..452231) 93% ident Ref exons = (6..115,116..195,196..360,361..457,458..534, 535..739,740..891,892..965,966..1089,1090..1188, 1189..1268,1269..1376,1377..1488,1489..1606, 1607..1710,1711..1803,1804..1893,1894..2097, 2098..2170,2171..2256,2257..2336,2337..2430, 2431..2605,2606..2745,2746..2847,2848..2996, 2997..3125,3126..3348,3349..3539,3540..3666, 3667..3744,3745..3871) 65 + 382500 398992 BU297686.1 est_others unknown 780 5 pieces Seq exons = (382500..382661,389063..389159,394105..394181, 396700..396904,398890..398992) 86% ident Ref exons = (9..168,169..265,266..341,342..547,548..652) 66 + 382568 389161 BU916787.1 est_others unknown 894 2 pieces Seq exons = (382568..382661,389063..389161) 83% ident Ref exons = (494..587,588..686) 67 + 394118 399007 ET63394 tigr_egad mouse 4150 3 pieces Seq exons = (394118..394181,396700..396904,398890..399007) 82% ident Ref exons = (704..767,768..973,974..1090) 68 + 396698 399011 AW653226.1 est_others unknown 541 2 pieces Seq exons = (396698..396904,398890..399011) 80% ident Ref exons = (168..375,376..496) 69 + 396698 399011 HT97612 tigr_egad human 4337 2 pieces Seq exons = (396698..396904,398890..399011) 80% ident Ref exons = (870..1077,1078..1198) 70 + 398977 399622 CB269226.1 est_human human 645 1 piece Seq exons = (398977..399622) 99% ident Ref exons = (1..645) 71 + 400539 401845 BG409731.1 est_others unknown 645 2 pieces Seq exons = (400539..400614,401722..401845) 89% ident Ref exons = (166..241,242..365) 72 + 401721 401841 BE844095.1 est_human human 217 1 piece Seq exons = (401721..401841) 85% ident Ref exons = (216..96) 73 + 401805 402225 BF748764.1 est_human human 423 1 piece Seq exons = (401805..402225) 94% ident Ref exons = (1..419) 74 + 402685 407771 BU395520.1 est_others unknown 776 3 pieces Seq exons = (402685..402755,402851..402930,407664..407771) 92% ident Ref exons = (1..71,72..151,152..259) 75 + 412758 412842 R29742.1 est_human human 129 1 piece Seq exons = (412758..412842) 91% ident Ref exons = (48..129) 76 + 417895 435056 CA511551.1 est_others rat 742 7 pieces Seq exons = (417895..417972,420100..420212,422799..422859, 427868..428007,429493..429594,432916..433064, 434957..435056) 94% ident Ref exons = (1..77,78..188,189..251,252..391,392..493,494..642, 643..742) 77 + 420118 429581 BU320780.1 est_others unknown 817 4 pieces Seq exons = (420118..420192,422685..422859,427868..428007, 429493..429581) 87% ident Ref exons = (145..219,220..394,395..533,534..623) 78 + 422765 453001 AK034759 riken_cdna mouse 2158 10 pieces Seq exons = (422765..422859,427868..428007,429493..429594, 432916..433064,434957..435085,438083..438306, 442111..442300,445554..445680,446908..446985, 452110..453001) 94% ident Ref exons = (1..95,96..235,236..337,338..486,487..615,616..838, 839..1029,1030..1156,1157..1234,1235..2113) 79 + 422806 435064 CB223429.1 est_others unknown 555 5 pieces Seq exons = (422806..422859,427868..428007,429493..429594, 432916..433064,434957..435064) 94% ident Ref exons = (2..55,56..195,196..297,298..446,447..554) 80 + 427881 433065 BU912515.1 est_others unknown 859 3 pieces Seq exons = (427881..428007,429493..429594,432916..433065) 84% ident Ref exons = (1..126,127..228,229..378) 81 + 429492 433065 CA987421.1 est_others unknown 894 2 pieces Seq exons = (429492..429594,432916..433065) 83% ident Ref exons = (44..146,147..296) 82 + 429500 435091 CB017626.1 est_others unknown 417 3 pieces Seq exons = (429500..429594,432916..433064,434957..435091) 88% ident Ref exons = (1..94,95..244,245..380) 83 + 434961 438204 BU113741.1 est_others unknown 899 2 pieces Seq exons = (434961..435085,438083..438204) 86% ident Ref exons = (612..737,738..860) 84 + 435030 445681 BG292495.1 est_human human 868 5 pieces Seq exons = (435030..435085,438083..438306,442111..442300, 442390..442500,445554..445681) 96% ident Ref exons = (1..56,57..279,280..469,470..581,582..716) 85 + 438090 442231 AL852546.1 est_others unknown 673 2 pieces Seq exons = (438090..438288,442111..442231) 82% ident Ref exons = (352..550,551..671) 86 + 438090 442231 AL875246.1 est_others unknown 677 2 pieces Seq exons = (438090..438288,442111..442231) 82% ident Ref exons = (352..550,551..671) 87 + 438095 442300 BG512947.1 est_others unknown 552 2 pieces Seq exons = (438095..438288,442111..442300) 81% ident Ref exons = (32..225,226..415) 88 + 438131 445597 AV711824.1 est_human human 356 4 pieces Seq exons = (438131..438306,442111..442216,442269..442300, 445554..445597) 100% ident Ref exons = (1..176,177..281,282..312,313..356) 89 + 438135 442237 BU111034.1 est_others unknown 630 2 pieces Seq exons = (438135..438288,442111..442237) 82% ident Ref exons = (2..156,157..282) 90 + 438143 442237 BU314675.1 est_others unknown 722 2 pieces Seq exons = (438143..438288,442111..442237) 82% ident Ref exons = (1..147,148..273) 91 + 438189 446985 BG619486.1 est_human human 624 5 pieces Seq exons = (438189..438306,442111..442300,442390..442500, 445554..445680,446908..446985) 99% ident Ref exons = (1..118,119..308,309..419,420..547,548..624) 92 + 438247 442479 AA117349.1 est_mouse mouse 340 3 pieces Seq exons = (438247..438306,442111..442300,442390..442479) 95% ident Ref exons = (1..59,60..250,251..340) 93 + 438255 446954 AW744277.1 est_mouse mouse 527 5 pieces Seq exons = (438255..438306,442111..442300,442390..442500, 445554..445680,446908..446954) 95% ident Ref exons = (1..51,52..242,243..353,354..480,481..527) 94 + 442122 452411 BQ225502.1 est_human human 836 5 pieces Seq exons = (442122..442300,442390..442500,445554..445680, 446908..446985,452110..452411) 99% ident Ref exons = (1..179,180..290,291..417,418..495,496..802) 95 + 442131 452392 BU593496.2 est_mouse mouse 959 5 pieces Seq exons = (442131..442300,442390..442500,445554..445680, 446908..446985,452110..452392) 94% ident Ref exons = (50..219,220..330,331..457,458..536,537..826) 96 + 442401 445676 CB233025.1 est_mouse mouse 1082 2 pieces Seq exons = (442401..442500,445554..445676) 98% ident Ref exons = (3..102,103..225) 97 + 445550 452254 BU362408.1 est_others unknown 783 3 pieces Seq exons = (445550..445680,446908..446985,452110..452254) 88% ident Ref exons = (379..507,508..587,588..739) 98 + 445550 452306 BU240901.1 est_others unknown 756 3 pieces Seq exons = (445550..445680,446908..446985,452110..452306) 87% ident Ref exons = (350..478,479..558,559..756) 99 + 445550 452379 AJ399342.1 est_others unknown 647 3 pieces Seq exons = (445550..445680,446908..446985,452110..452379) 88% ident Ref exons = (77..205,206..285,286..576) 100 + 445557 452214 BF397032.1 est_others rat 381 3 pieces Seq exons = (445557..445680,446908..446985,452110..452214) 91% ident Ref exons = (325..202,201..124,123..15) 101 + 445593 452540 AL120830.1 est_human human 595 3 pieces Seq exons = (445593..445680,446908..446985,452110..452540) 97% ident Ref exons = (1..88,89..166,167..594) 102 + 445609 452326 BI290325.1 est_others rat 385 3 pieces Seq exons = (445609..445680,446908..446985,452110..452326) 95% ident Ref exons = (385..314,313..236,235..17) 103 + 446903 452411 BF434878.1 est_human human 397 3 pieces Seq exons = (446903..446985,452110..452273,452288..452411) 100% ident Ref exons = (378..297,296..134,134..9) 104 + 448201 448406 BF831033.1 est_human human 342 1 piece Seq exons = (448201..448406) 98% ident Ref exons = (223..19) 105 + 452202 452843 BE869836.1 est_human human 946 1 piece Seq exons = (452202..452843) 91% ident Ref exons = (1..643) 106 + 452309 453001 BQ210008.1 est_others rat 728 1 piece Seq exons = (452309..453001) 88% ident Ref exons = (723..47) 107 + 452321 452855 AA307624.1 est_human human 534 1 piece Seq exons = (452321..452855) 93% ident Ref exons = (1..534) 108 + 452443 452937 AI179285.1 est_others unknown 527 1 piece Seq exons = (452443..452937) 92% ident Ref exons = (499..9) 109 + 452443 453332 BQ067900.1 est_human human 1045 1 piece Seq exons = (452443..453332) 93% ident Ref exons = (23..916) 110 + 452474 453360 BM452406.1 est_human human 1056 1 piece Seq exons = (452474..453360) 94% ident Ref exons = (1..891) 111 + 452478 453188 BI109068.1 est_mouse mouse 736 1 piece Seq exons = (452478..453188) 89% ident Ref exons = (22..724) 112 + 452493 453277 AV713595.1 est_human human 701 2 pieces Seq exons = (452493..453159,453244..453277) 96% ident Ref exons = (1..665,666..701) 113 + 452593 453364 BG622150.1 est_human human 778 1 piece Seq exons = (452593..453364) 92% ident Ref exons = (1..777) 114 + 452708 453577 BQ721176.1 est_human human 904 1 piece Seq exons = (452708..453577) 93% ident Ref exons = (1..875) 115 + 452716 453445 BE371823.1 est_mouse mouse 1015 1 piece Seq exons = (452716..453445) 88% ident Ref exons = (1..733) 116 + 452788 453476 CA976388.1 est_mouse mouse 986 1 piece Seq exons = (452788..453476) 91% ident Ref exons = (1..686) -------------------------------------------------------------------------------- PERCEVAL Exon Candidates (76 predicted) Index Std Begin End Frm Type Len Scr Quality 1 - 17179 17374 2 Internal 196 97 Excellent 2 - 17930 18030 0 Internal 101 78 Good 3 - 18643 18740 0 Initial 98 92 Excellent 4 - 22621 22659 0 Terminal 39 93 Excellent 5 - 23206 23298 0 Internal 93 100 Excellent 6 - 34450 34570 2 Internal 121 76 Good 7 - 37638 37739 0 Initial 102 82 Good 8 - 38066 38250 1 Internal 185 56 Marginal 9 - 45447 45529 1 Terminal 83 83 Good 10 - 47557 47690 2 Internal 134 98 Excellent 11 - 48257 48378 0 Internal 122 96 Excellent 12 - 55723 55783 0 Initial 61 40 Poor 13 - 58394 58485 1 Internal 92 89 Good 14 - 83324 83419 2 Internal 96 59 Marginal 15 - 84488 84568 2 Internal 81 64 Marginal 16 - 84570 84797 0 Initial 228 59 Marginal 17 + 100096 100209 2 Internal 114 81 Good 18 + 136585 136876 2 Terminal 292 79 Good 19 + 142994 143137 1 Internal 144 91 Excellent 20 - 151545 151760 0 Single 216 63 Marginal 21 + 166876 167082 0 Internal 207 49 Marginal 22 - 205625 205777 1 Internal 153 99 Excellent 23 - 207132 207199 1 Terminal 68 83 Good 24 + 211165 211274 2 Internal 110 100 Excellent 25 - 232927 233049 1 Internal 123 71 Good 26 + 237167 237535 1 Internal 369 93 Excellent 27 + 240155 240254 1 Internal 100 87 Good 28 + 252029 252208 1 Internal 180 100 Excellent 29 + 258524 258717 1 Terminal 194 87 Good 30 + 265033 265142 1 Internal 110 51 Marginal 31 + 266612 266773 0 Single 162 77 Good 32 - 274792 274939 0 Internal 148 82 Good 33 - 295260 295302 2 Terminal 43 92 Excellent 34 + 299309 299488 0 Terminal 180 58 Marginal 35 - 310783 310941 0 Terminal 159 66 Marginal 36 - 314623 314656 2 Terminal 34 85 Good 37 + 326890 326941 2 Terminal 52 82 Good 38 + 336519 336647 2 Internal 129 50 Marginal 39 + 337911 337941 0 Initial 31 41 Marginal 40 - 354132 354165 2 Terminal 34 51 Marginal 41 - 365656 365778 0 Internal 123 70 Good 42 - 367949 368010 0 Initial 62 45 Marginal 43 - 375698 375850 0 Terminal 153 47 Marginal 44 - 376926 377080 1 Internal 155 98 Excellent 45 + 382491 382661 0 Initial 171 100 Excellent 46 + 389063 389159 0 Internal 97 91 Excellent 47 + 394105 394181 1 Internal 77 97 Excellent 48 + 396700 396904 0 Internal 205 79 Good 49 + 398890 399086 1 Internal 197 98 Excellent 50 + 401722 401845 2 Internal 124 91 Excellent 51 + 402657 402755 0 Internal 99 100 Excellent 52 + 402851 402930 0 Internal 80 80 Good 53 + 407664 407771 2 Internal 108 93 Excellent 54 + 409402 409477 2 Internal 76 75 Good 55 + 412760 412885 0 Internal 126 100 Excellent 56 + 414438 414530 0 Internal 93 100 Excellent 57 + 414652 414741 0 Internal 90 94 Excellent 58 + 415384 415587 0 Internal 204 67 Marginal 59 + 417412 417486 0 Terminal 75 100 Excellent 60 + 420082 420192 0 Initial 111 91 Excellent 61 + 422685 422859 0 Internal 175 100 Excellent 62 + 427868 428007 1 Internal 140 100 Excellent 63 + 429493 429594 0 Internal 102 100 Excellent 64 + 432916 433064 0 Internal 149 100 Excellent 65 + 434957 435089 2 Internal 133 93 Excellent 66 + 438043 438306 1 Internal 264 75 Good 67 + 442111 442300 1 Internal 190 91 Excellent 68 + 442413 442500 1 Internal 88 81 Good 69 + 443806 443850 0 Terminal 45 64 Marginal 70 + 445554 445680 2 Internal 127 97 Excellent 71 + 446908 446985 0 Internal 78 88 Good 72 + 447375 447426 0 Initial 52 40 Poor 73 + 448278 448399 1 Terminal 122 53 Marginal 74 + 452771 452860 0 Terminal 90 72 Good 75 - 482559 482806 1 Terminal 248 62 Marginal 76 - 483935 484117 1 Internal 183 66 Marginal -------------------------------------------------------------------------------- # Output_end: pretty gc_object_end: gene_grailexp --organism human --output pretty --dbpat grailexp_v3