BLASTP 2.2.8 [Jan-05-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1079343637-7408-130355362588.BLASTQ3 Query= GrailEXP Gene 7, Var 1 protein|Derived from similarity to BC001765.1 (1268 letters) Database: Non-redundant SwissProt sequences 145,815 sequences; 53,526,777 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
RID: 1079343637-7408-130355362588.BLASTQ3
Query= GrailEXP Gene 7, Var 1 protein|Derived from similarity to BC001765.1 (1268 letters)
Database: Non-redundant SwissProt sequences 145,815 sequences; 53,526,777 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Score E Sequences producing significant alignments: (bits) Value gi|29336545|sp|Q8N3U4|SA2_HUMAN Cohesin subunit SA-2 (Strom... 2160 0.0 gi|29336529|sp|O35638|SA2_MOUSE Cohesin subunit SA-2 (Strom... 2139 0.0 gi|29336558|sp|Q9DGN0|SA2_XENLA Cohesin subunit SA-2 (XSA-2... 2032 0.0 gi|29336549|sp|Q8WVM7|SA1_HUMAN Cohesin subunit SA-1 (Strom... 1625 0.0 gi|29336557|sp|Q9D3E6|SA1_MOUSE Cohesin subunit SA-1 (Strom... 1612 0.0 gi|29336559|sp|Q9DGN1|SA1_XENLA Cohesin subunit SA-1 (XSA-1... 1576 0.0 gi|29336569|sp|Q9UJ98|SA3_HUMAN Cohesin subunit SA-3 (Strom... 1026 0.0 gi|29336530|sp|O70576|SA3_MOUSE Cohesin subunit SA-3 (Strom... 996 0.0 gi|29336522|sp|Q99M76|SA3_RAT Cohesin subunit SA-3 (Stromal... 996 0.0 gi|19855048|sp|O13816|SCC3_SCHPO Cohesin subunit psc3 (SCC3... 114 1e-24 gi|731791|sp|P40541|SCC3_YEAST Cohesin subunit SCC3 (Irregu... 82 1e-14 gi|3915379|sp|O25505|ENGA_HELPY GTP-binding protein engA 35 1.1 gi|13124138|sp|Q9KPC5|ENO_VIBCH Enolase (2-phosphoglycerate... 33 3.1 gi|24418590|sp|Q8RFN7|PGK_FUSNN Phosphoglycerate kinase 33 5.5 gi|24212001|sp|Q979T0|MOAA_THEVO Probable molybdenum cofact... 33 5.5 gi|29839249|sp|Q8GE63|ENO_AERHY Enolase (2-phosphoglycerate... 33 6.6 gi|3914404|sp|O29548|PPSA_ARCFU Probable phosphoenolpyruvat... 32 9.5 Alignments
Score E Sequences producing significant alignments: (bits) Value gi|29336545|sp|Q8N3U4|SA2_HUMAN Cohesin subunit SA-2 (Strom... 2160 0.0 gi|29336529|sp|O35638|SA2_MOUSE Cohesin subunit SA-2 (Strom... 2139 0.0 gi|29336558|sp|Q9DGN0|SA2_XENLA Cohesin subunit SA-2 (XSA-2... 2032 0.0 gi|29336549|sp|Q8WVM7|SA1_HUMAN Cohesin subunit SA-1 (Strom... 1625 0.0 gi|29336557|sp|Q9D3E6|SA1_MOUSE Cohesin subunit SA-1 (Strom... 1612 0.0 gi|29336559|sp|Q9DGN1|SA1_XENLA Cohesin subunit SA-1 (XSA-1... 1576 0.0 gi|29336569|sp|Q9UJ98|SA3_HUMAN Cohesin subunit SA-3 (Strom... 1026 0.0 gi|29336530|sp|O70576|SA3_MOUSE Cohesin subunit SA-3 (Strom... 996 0.0 gi|29336522|sp|Q99M76|SA3_RAT Cohesin subunit SA-3 (Stromal... 996 0.0 gi|19855048|sp|O13816|SCC3_SCHPO Cohesin subunit psc3 (SCC3... 114 1e-24 gi|731791|sp|P40541|SCC3_YEAST Cohesin subunit SCC3 (Irregu... 82 1e-14 gi|3915379|sp|O25505|ENGA_HELPY GTP-binding protein engA 35 1.1 gi|13124138|sp|Q9KPC5|ENO_VIBCH Enolase (2-phosphoglycerate... 33 3.1 gi|24418590|sp|Q8RFN7|PGK_FUSNN Phosphoglycerate kinase 33 5.5 gi|24212001|sp|Q979T0|MOAA_THEVO Probable molybdenum cofact... 33 5.5 gi|29839249|sp|Q8GE63|ENO_AERHY Enolase (2-phosphoglycerate... 33 6.6 gi|3914404|sp|O29548|PPSA_ARCFU Probable phosphoenolpyruvat... 32 9.5
>gi|29336545|sp|Q8N3U4|SA2_HUMAN Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2) Length = 1162 Score = 2160 bits (5596), Expect = 0.0 Identities = 1101/1199 (91%), Positives = 1101/1199 (91%), Gaps = 37/1199 (3%) Query: 70 MNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKG 129 MNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKG Sbjct: 1 MNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKG 60 Query: 130 VVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYS 189 VVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYS Sbjct: 61 VVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYS 120 Query: 190 IIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYE 249 IIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYE Sbjct: 121 IIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYE 180 Query: 250 AERNKMIGKRANXXXXXXXXXXXXXXXNQDEIENMMNAIFKGVFVHRYRDXXXXXXXXXX 309 AERNKMIGKRAN NQDEIENMMNAIFKGVFVHRYRD Sbjct: 181 AERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEIRAICI 240 Query: 310 XXXXXWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTS 369 WMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTS Sbjct: 241 EEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTS 300 Query: 370 RFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAG 429 RFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAG Sbjct: 301 RFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAG 360 Query: 430 EFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCAT 489 EFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCAT Sbjct: 361 EFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCAT 420 Query: 490 ELLKDWECMNSXXXXXXXXXXXXXTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLT 549 ELLKDWECMNS TDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLT Sbjct: 421 ELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLT 480 Query: 550 AKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHL 609 AKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHL Sbjct: 481 AKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHL 540 Query: 610 DALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLL 669 DALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLL Sbjct: 541 DALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLL 600 Query: 670 EDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQI 729 EDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQI Sbjct: 601 EDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQI 660 Query: 730 VIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTTVKEQAFT 789 VIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTTVKEQAFT Sbjct: 661 VIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTTVKEQAFT 720 Query: 790 ILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNSADGQQE 849 ILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNSADGQQE Sbjct: 721 ILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNSADGQQE 780 Query: 850 DEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQ 909 DEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQ Sbjct: 781 DEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQ 840 Query: 910 IDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREA 969 IDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREA Sbjct: 841 IDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREA 900 Query: 970 IAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQ 1029 IAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQ Sbjct: 901 IAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQ 960 Query: 1030 MSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQ 1089 MSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQ Sbjct: 961 MSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQ 1020 Query: 1090 XXXXXXXXXXXXXXXXXXQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMSVYPMQTEHH 1149 QTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMSVYPMQTEHH Sbjct: 1021 LSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMSVYPMQTEHH 1080 Query: 1150 QTPLDYNTQVTWMLXXXXXXXXXXXXXXXXMSYVKLRTNLQHAIRRGTSLMEDDEEPIVE 1209 QTPLDYN RRGTSLMEDDEEPIVE Sbjct: 1081 QTPLDYN-------------------------------------RRGTSLMEDDEEPIVE 1103 Query: 1210 DVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF 1268 DVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF Sbjct: 1104 DVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF 1162
>gi|29336529|sp|O35638|SA2_MOUSE Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2) Length = 1162 Score = 2139 bits (5543), Expect = 0.0 Identities = 1089/1199 (90%), Positives = 1095/1199 (91%), Gaps = 37/1199 (3%) Query: 70 MNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKG 129 MNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKG Sbjct: 1 MNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKG 60 Query: 130 VVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYS 189 VVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYS Sbjct: 61 VVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYS 120 Query: 190 IIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYE 249 IIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYE Sbjct: 121 IIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYE 180 Query: 250 AERNKMIGKRANXXXXXXXXXXXXXXXNQDEIENMMNAIFKGVFVHRYRDXXXXXXXXXX 309 AERNKMIGKRAN NQDEIENMMNAIFKGVFVHRYR Sbjct: 181 AERNKMIGKRANERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRYAIAEIRAICI 240 Query: 310 XXXXXWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTS 369 WMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTS Sbjct: 241 EEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTS 300 Query: 370 RFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAG 429 RFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAG Sbjct: 301 RFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAG 360 Query: 430 EFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCAT 489 EFLYKKLFSRRDPEEDG+MKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCAT Sbjct: 361 EFLYKKLFSRRDPEEDGLMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCAT 420 Query: 490 ELLKDWECMNSXXXXXXXXXXXXXTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLT 549 ELLKDWECMNS TDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLT Sbjct: 421 ELLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLT 480 Query: 550 AKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHL 609 AKEKKTQLDDRT+ITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLE L Sbjct: 481 AKEKKTQLDDRTRITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLENDL 540 Query: 610 DALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLL 669 DALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLL Sbjct: 541 DALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLL 600 Query: 670 EDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQI 729 EDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQI Sbjct: 601 EDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQI 660 Query: 730 VIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTTVKEQAFT 789 VIHALQC HYVILWQLAKITES+STKEDLLRLKKQMRVFCQICQHYLTNVNTTVKEQAFT Sbjct: 661 VIHALQCAHYVILWQLAKITESTSTKEDLLRLKKQMRVFCQICQHYLTNVNTTVKEQAFT 720 Query: 790 ILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNSADGQQE 849 ILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD+NSADGQQE Sbjct: 721 ILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDSNSADGQQE 780 Query: 850 DEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQ 909 DEASKIEALHKRRNLLAAFCKLIVYTVVEMN+AADIFKQYMKYYNDYGDIIKETMSKTRQ Sbjct: 781 DEASKIEALHKRRNLLAAFCKLIVYTVVEMNSAADIFKQYMKYYNDYGDIIKETMSKTRQ 840 Query: 910 IDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREA 969 IDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKE ARRFALTFGLDQLKTREA Sbjct: 841 IDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKEFARRFALTFGLDQLKTREA 900 Query: 970 IAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQ 1029 IAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQ Sbjct: 901 IAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQ 960 Query: 1030 MSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQ 1089 MSLRREDVWLPLMSYRNSLLAGGDDDTMSVISG+SSRGSTVRSKKSKPSTGKRKVVEGMQ Sbjct: 961 MSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGMSSRGSTVRSKKSKPSTGKRKVVEGMQ 1020 Query: 1090 XXXXXXXXXXXXXXXXXXQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMSVYPMQTEHH 1149 QTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMSVYPMQ EHH Sbjct: 1021 LALPEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMSVYPMQAEHH 1080 Query: 1150 QTPLDYNTQVTWMLXXXXXXXXXXXXXXXXMSYVKLRTNLQHAIRRGTSLMEDDEEPIVE 1209 QTPLDYN RRGTSLMEDDEEPIVE Sbjct: 1081 QTPLDYN-------------------------------------RRGTSLMEDDEEPIVE 1103 Query: 1210 DVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF 1268 DVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF Sbjct: 1104 DVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF 1162
>gi|29336558|sp|Q9DGN0|SA2_XENLA Cohesin subunit SA-2 (XSA-2) (Stromal antigen 2 homolog) (SCC3 homolog 2) Length = 1194 Score = 2032 bits (5264), Expect = 0.0 Identities = 1030/1200 (85%), Positives = 1086/1200 (90%), Gaps = 7/1200 (0%) Query: 70 MNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKG 129 MNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIE+YKH +D+ALLDLINFFIQCSGCKG Sbjct: 1 MNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIEAYKHSKDVALLDLINFFIQCSGCKG 60 Query: 130 VVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYS 189 VV+ EMFRHMQNSEIIR+MTEEFDEDSGDYPLTMAGPQWKKFK SFCEFIGVLVRQCQYS Sbjct: 61 VVSGEMFRHMQNSEIIRRMTEEFDEDSGDYPLTMAGPQWKKFKFSFCEFIGVLVRQCQYS 120 Query: 190 IIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYE 249 IIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYE Sbjct: 121 IIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYE 180 Query: 250 AERNKMIGKRANXXXXXXXXXXXXXXXNQDEIENMMNAIFKGVFVHRYRDXXXXXXXXXX 309 AERNKMIGKRAN NQDEIENMMNAIFKGVFVHRYRD Sbjct: 181 AERNKMIGKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEIRAICI 240 Query: 310 XXXXXWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTS 369 WMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYN+ELN+KLELFTS Sbjct: 241 EEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNTKLELFTS 300 Query: 370 RFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAG 429 RFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSS+EVLTAEDCENVYHLVYSAHRPVAVAAG Sbjct: 301 RFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSDEVLTAEDCENVYHLVYSAHRPVAVAAG 360 Query: 430 EFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCAT 489 EFLYKKLFS RDPEEDG+MKRRGR PNANLVKTLVFFFLESELHEHAAYLVDSMWDCAT Sbjct: 361 EFLYKKLFSCRDPEEDGIMKRRGRLSPNANLVKTLVFFFLESELHEHAAYLVDSMWDCAT 420 Query: 490 ELLKDWECMNSXXXXXXXXXXXXXTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLT 549 ELLKDW+CMNS TDRQESALIEI+LCT+RQAAECHPPVGRGTGKRVLT Sbjct: 421 ELLKDWDCMNSLLLDDPLNGEEALTDRQESALIEILLCTVRQAAECHPPVGRGTGKRVLT 480 Query: 550 AKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHL 609 AKEKK+Q+DD+T +TELFAV+LPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHL Sbjct: 481 AKEKKSQMDDKTHLTELFAVSLPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHL 540 Query: 610 DALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLL 669 +ALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTI+NRVDI++SQLIDELADKFNRLL Sbjct: 541 EALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIYNRVDIAKSQLIDELADKFNRLL 600 Query: 670 EDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQI 729 EDFLQE EE DEDDAYQVLSTLKRITAFHNAHDLS+WDLF+ NYKLLKTGIENGDMPEQI Sbjct: 601 EDFLQEEEELDEDDAYQVLSTLKRITAFHNAHDLSRWDLFSGNYKLLKTGIENGDMPEQI 660 Query: 730 VIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTTVKEQAFT 789 V+HALQCTHYVILWQLAK +E+ S+KE+L+ LK+QMRVFCQICQHYLTNVNT VKEQAFT Sbjct: 661 VVHALQCTHYVILWQLAKFSETGSSKEELITLKRQMRVFCQICQHYLTNVNTAVKEQAFT 720 Query: 790 ILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNSADGQQE 849 ILCD+LMIFSHQI+ GGR+ LEPLVY+PDSSLQSELLSFILDHVFI+QDDDN+S+DGQQ+ Sbjct: 721 ILCDVLMIFSHQIVVGGREALEPLVYSPDSSLQSELLSFILDHVFIDQDDDNSSSDGQQD 780 Query: 850 DEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQ 909 DEASKIEALHKRRNLLAAFCKLIVY VVEMNTAADIFKQYM+YYNDYGDIIKETMSKTRQ Sbjct: 781 DEASKIEALHKRRNLLAAFCKLIVYNVVEMNTAADIFKQYMRYYNDYGDIIKETMSKTRQ 840 Query: 910 IDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREA 969 IDKIQCAKTLILSLQQLFNEMIQE+ YNFDRSS TFS IKELARRFALTFGLDQLKTREA Sbjct: 841 IDKIQCAKTLILSLQQLFNEMIQEHSYNFDRSSPTFSAIKELARRFALTFGLDQLKTREA 900 Query: 970 IAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQ 1029 IAMLHKDGIEFAFKEP+PQGE+HPPLN+AFLDILSEFSSKLLRQDK+TVY YLE+FMTFQ Sbjct: 901 IAMLHKDGIEFAFKEPSPQGEAHPPLNMAFLDILSEFSSKLLRQDKKTVYAYLERFMTFQ 960 Query: 1030 MSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQ 1089 MSLRREDVWLPLMSYRNSLLAGGDDDTMSV+SG+S RGS+ RSKK KP TGKRK+ Sbjct: 961 MSLRREDVWLPLMSYRNSLLAGGDDDTMSVMSGMSGRGSSTRSKKIKPPTGKRKL----- 1015 Query: 1090 XXXXXXXXXXXXXXXXXXQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMSVYPMQTEHH 1149 QT++TPVM+QTPQLTSTIMREPKRLRPE+S+M VYPMQ EHH Sbjct: 1016 -PEAEESSSSDSMWLNREQTMNTPVMLQTPQLTSTIMREPKRLRPEESYMPVYPMQPEHH 1074 Query: 1150 QTPLDYNTQVTWML-XXXXXXXXXXXXXXXXMSYVKLRTNLQHAIRRGTSLMEDDEEPIV 1208 Q LDYNTQVTWML M+YVKLR+NLQHAIRR T LMEDDEEPIV Sbjct: 1075 QPSLDYNTQVTWMLAQRQQEEAARQQQERAAMNYVKLRSNLQHAIRRNTGLMEDDEEPIV 1134 Query: 1209 EDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF 1268 EDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF Sbjct: 1135 EDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF 1194
>gi|29336549|sp|Q8WVM7|SA1_HUMAN Cohesin subunit SA-1 (Stromal antigen 1) (SCC3 homolog 1) Length = 1258 Score = 1625 bits (4208), Expect = 0.0 Identities = 827/1212 (68%), Positives = 966/1212 (79%), Gaps = 28/1212 (2%) Query: 65 SGPNRMNGHHQQNGV-ENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQ 123 +G R NGH QQNG E + LFEVVK+GKSAMQSVVDDWIESYK DRDIALLDLINFFIQ Sbjct: 67 AGRGRANGHPQQNGEGEPVTLFEVVKLGKSAMQSVVDDWIESYKQDRDIALLDLINFFIQ 126 Query: 124 CSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLV 183 CSGC+G V EMFR+MQN+EIIRKMTEEFDEDSGDYPLTM GPQWKKF+S+FCEFIGVL+ Sbjct: 127 CSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCEFIGVLI 186 Query: 184 RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN 243 RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSI+ DN Sbjct: 187 RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDN 246 Query: 244 TQRQYEAERNKMIGKRANXXXXXXXXXXXXXXXNQDEIENMMNAIFKGVFVHRYRDXXXX 303 TQRQYEAERNKMIGKRAN NQDEIENMMN+IFKG+FVHRYRD Sbjct: 247 TQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIAE 306 Query: 304 XXXXXXXXXXXWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSK 363 WMKMYSDAFLNDSYLKYVGWT+HD+QGEVRLKCL ALQ LY N+EL K Sbjct: 307 IRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPK 366 Query: 364 LELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRP 423 LELFT+RFKDRIVSMTLDKEYDVAV+AI+L+TL+L SEE L+ EDCENVYHLVYSAHRP Sbjct: 367 LELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLVYSAHRP 426 Query: 424 VAVAAGEFLYKKLFSRRDPE-EDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVD 482 VAVAAGEFL+KKLFSR DP+ E+ + KRRGR PN NL++ LV FFLESELHEHAAYLVD Sbjct: 427 VAVAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAAYLVD 486 Query: 483 SMWDCATELLKDWECMNSXXXXXXXXXXXXXTDRQESALIEIMLCTIRQAAECHPPVGRG 542 S+W+ + ELLKDWECM +DRQESALIE+M+CTIRQAAE HPPVGRG Sbjct: 487 SLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQAAEAHPPVGRG 546 Query: 543 TGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTT 602 TGKRVLTAKE+KTQ+DDR K+TE F + LP LL+KYS DAEKV NLLQ+PQYFDLEIY+T Sbjct: 547 TGKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFDLEIYST 606 Query: 603 GRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELA 662 GR+EKHLDALL+QI+ +VEKH ++DVLEACSKTY LCNEE+TI NRVDI+RSQLIDE Sbjct: 607 GRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCNEEYTIQNRVDIARSQLIDEFV 666 Query: 663 DKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIEN 722 D+FN +ED LQEGEE D+DD Y VLSTLKR+T+F NAHDL+KWDLF Y+LLKTGIE+ Sbjct: 667 DRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFQNAHDLTKWDLFGNCYRLLKTGIEH 726 Query: 723 GDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTT 782 G MPEQIV+ ALQC+HY ILWQL KIT+ S +KEDLL L+K ++ F +CQ L+NVNT Sbjct: 727 GAMPEQIVVQALQCSHYSILWQLVKITDGSPSKEDLLVLRKTVKSFLAVCQQCLSNVNTP 786 Query: 783 VKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNN 842 VKEQAF +LCD+LMIFSHQ+M+GGR+ L+PLV+ PD+ LQSELLSF++DHVFI+QD++N Sbjct: 787 VKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDTGLQSELLSFVMDHVFIDQDEENQ 846 Query: 843 SADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKE 902 S +G +EDEA+KIEALHKRRNLLAAF KLI+Y +V+M+ AADIFK YMKYYNDYGDIIKE Sbjct: 847 SMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMKYYNDYGDIIKE 906 Query: 903 TMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLD 962 T+SKTRQIDKIQCAKTLILSLQQLFNE++QE G N DR+S+ SGIKELARRFALTFGLD Sbjct: 907 TLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKELARRFALTFGLD 966 Query: 963 QLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYL 1022 Q+KTREA+A LHKDGIEFAFK N +G+ +PP NLAFL++LSEFSSKLLRQDK+TV+ YL Sbjct: 967 QIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLEVLSEFSSKLLRQDKKTVHSYL 1026 Query: 1023 EKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTM-SVISGISSRGSTVRSKKSKPSTGK 1081 EKF+T QM RREDVWLPL+SYRNSL+ GG+DD M SS+ S+VR+KK +P K Sbjct: 1027 EKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVNSGSSSSKTSSVRNKKGRPPLHK 1086 Query: 1082 RKVVEGMQXXXXXXXXXXXXXXXXXXQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMSV 1141 ++V + + TP + PQLTST++RE R + + Sbjct: 1087 KRVED---------ESLDNTWLNRTDTMIQTPGPLPAPQLTSTVLRENSRPMGD----QI 1133 Query: 1142 YPMQTEHHQTPLDY----NTQVTWMLXXXXXXXXXXXXXXXXMSYVKLRTNLQHAIRRGT 1197 ++EH P D+ Q++W+ M+Y+K+RT ++HA+R Sbjct: 1134 QEPESEHGSEP-DFLHNPQMQISWL--GQPKLEDLNRKDRTGMNYMKVRTGVRHAVR--- 1187 Query: 1198 SLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASI 1257 LME+D EPI EDVMMSS ++ED+NE + DTM IDLPPS+NRRER EL+PDFFD A+I Sbjct: 1188 GLMEEDAEPIFEDVMMSSRSQLEDMNEEFE-DTMVIDLPPSRNRRERAELRPDFFDSAAI 1246 Query: 1258 M-DESVLGVSMF 1268 + D+S G+ MF Sbjct: 1247 IEDDSGFGMPMF 1258
>gi|29336557|sp|Q9D3E6|SA1_MOUSE Cohesin subunit SA-1 (Stromal antigen 1) (SCC3 homolog 1) Length = 1258 Score = 1612 bits (4174), Expect = 0.0 Identities = 826/1211 (68%), Positives = 961/1211 (79%), Gaps = 26/1211 (2%) Query: 65 SGPNRMNGHHQQNGV-ENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQ 123 +G R NGH QQNG + + LFEVVK+GKS MQSVVDDWIE YK DRDIALLDLINFFIQ Sbjct: 67 AGRGRANGHPQQNGDGDPVTLFEVVKLGKSRMQSVVDDWIELYKQDRDIALLDLINFFIQ 126 Query: 124 CSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLV 183 CSGC+G V EMFR+MQN+EIIRKMTEEFDEDSGDYPLTM GPQWKKF+S+FCEFIGVL+ Sbjct: 127 CSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCEFIGVLI 186 Query: 184 RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN 243 RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSI+ DN Sbjct: 187 RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDN 246 Query: 244 TQRQYEAERNKMIGKRANXXXXXXXXXXXXXXXNQDEIENMMNAIFKGVFVHRYRDXXXX 303 TQRQYEAERNKMIGKRAN NQDEIENMMN+IFKG+FVHRYRD Sbjct: 247 TQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIAE 306 Query: 304 XXXXXXXXXXXWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSK 363 WMKMYSDAFLNDSYLKYVGWT+HD+QGEVRLKCL ALQ LY N+EL K Sbjct: 307 IRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPK 366 Query: 364 LELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRP 423 LELFT+RFKDRIVSMTLDKEYDVAV+AI+L+TL+L SEE L+ EDCENVYHLVYSAHRP Sbjct: 367 LELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLVYSAHRP 426 Query: 424 VAVAAGEFLYKKLFSRRDPE-EDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVD 482 VAVAAGEFL+KKLFSR DP+ E+ + KRRGR PN NL++ LV FFLESELHEHAAYLVD Sbjct: 427 VAVAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAAYLVD 486 Query: 483 SMWDCATELLKDWECMNSXXXXXXXXXXXXXTDRQESALIEIMLCTIRQAAECHPPVGRG 542 S+W+ + ELLKDWECM +DRQESALIE+M+CTIRQAAE HPPVGRG Sbjct: 487 SLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQAAEAHPPVGRG 546 Query: 543 TGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTT 602 TGKRVLTAKE+KTQ+DDR K+TE F + LP LL+KYS DAEKV NLLQ+PQYFDLEIY+T Sbjct: 547 TGKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFDLEIYST 606 Query: 603 GRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELA 662 GR+EKHLDALL+QI+ +VEKH ++DVLEACSKTY LC+EE+TI NRVDI+RSQLIDE Sbjct: 607 GRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQLIDEFV 666 Query: 663 DKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIEN 722 D+FN +ED LQEGEE D+DD Y VLSTLKR+T+FHNAHDL+KWDLF Y+LLKTGIE+ Sbjct: 667 DRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLLKTGIEH 726 Query: 723 GDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTT 782 G MPEQIV+ ALQC+HY ILWQL KIT+ S +KEDLL L+K ++ F +CQ L+NVNT Sbjct: 727 GAMPEQIVVQALQCSHYSILWQLVKITDGSPSKEDLLVLRKTVKSFLAVCQQCLSNVNTP 786 Query: 783 VKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNN 842 VKEQAF +LCD+LMIFSHQ+M+GGR+ L+PLV+ PD+ LQSELLSF++DHVFI+QD++N Sbjct: 787 VKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDTGLQSELLSFVMDHVFIDQDEENQ 846 Query: 843 SADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKE 902 S +G +EDEA+KIEALHKRRNLLAAF KLI+Y +V+M+ AADIFK YMKYYNDYGDIIKE Sbjct: 847 SMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMKYYNDYGDIIKE 906 Query: 903 TMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLD 962 T+SKTRQIDKIQCAKTLILSLQQLFNE++QE G N DR+S+ SGIKELARRFALTFGLD Sbjct: 907 TLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKELARRFALTFGLD 966 Query: 963 QLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYL 1022 Q+KTREA+A LHKDGIEFAFK N +G+ +PP NLAFL++LSEFSSKLLRQDK+TV+ YL Sbjct: 967 QIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLEVLSEFSSKLLRQDKKTVHSYL 1026 Query: 1023 EKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTGKR 1082 EKF+T QM RREDVWLPL+SYRNSL+ GG+DD MSV SG SS ++ K R Sbjct: 1027 EKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVNSGSSSSKTSSVRSKKGRPPLHR 1086 Query: 1083 KVVEGMQXXXXXXXXXXXXXXXXXXQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMSVY 1142 K VE + TP + TPQLTST++RE R E + Sbjct: 1087 KRVE--------DESLDNTWLNRTDTMIQTPGPLPTPQLTSTVLRENSRPMGE----QIQ 1134 Query: 1143 PMQTEHHQTPLDY----NTQVTWMLXXXXXXXXXXXXXXXXMSYVKLRTNLQHAIRRGTS 1198 ++EH P D+ Q++W+ M+Y+K+R ++HA+R Sbjct: 1135 EPESEHGSEP-DFLHNPQMQISWL--GQPKLEDLNRKDRTGMNYMKVRAGVRHAVR---G 1188 Query: 1199 LMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIM 1258 LME+D EPI EDVMMSS ++ED+NE + DTM IDLPPS+NRRER EL+PDFFD A+I+ Sbjct: 1189 LMEEDAEPIFEDVMMSSRSQLEDMNEEFE-DTMVIDLPPSRNRRERAELRPDFFDSAAII 1247 Query: 1259 -DESVLGVSMF 1268 D+S G+ MF Sbjct: 1248 EDDSGFGMPMF 1258
>gi|29336559|sp|Q9DGN1|SA1_XENLA Cohesin subunit SA-1 (XSA-1) (Stromal antigen 1 homolog) (SCC3 homolog 1) Length = 1265 Score = 1576 bits (4082), Expect = 0.0 Identities = 816/1211 (67%), Positives = 960/1211 (79%), Gaps = 28/1211 (2%) Query: 66 GPNRMNGHHQQNGV-ENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQC 124 G R NGH QQNG + + LFEVVKMGKSAMQ+VVDDWIESYK DRDIALLDLINFFIQC Sbjct: 75 GRGRANGHPQQNGEGDPVTLFEVVKMGKSAMQAVVDDWIESYKQDRDIALLDLINFFIQC 134 Query: 125 SGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVR 184 SGCKG V EMFR+MQN+EIIRKMTEEFDEDSGDYPLTM GP WKKF+ +FCEFI VL+R Sbjct: 135 SGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPHWKKFRCNFCEFISVLIR 194 Query: 185 QCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNT 244 QCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSI+ DNT Sbjct: 195 QCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNT 254 Query: 245 QRQYEAERNKMIGKRANXXXXXXXXXXXXXXXNQDEIENMMNAIFKGVFVHRYRDXXXXX 304 QRQYE ERNK+I KRAN NQDEIENMMN+IFKG+FVHRYRD Sbjct: 255 QRQYETERNKIINKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIAEI 314 Query: 305 XXXXXXXXXXWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKL 364 WMKMYSDAFLNDSYLKYVGWT+HD+QGEVRLKCL ALQ LY N+EL KL Sbjct: 315 RAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKL 374 Query: 365 ELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPV 424 ELFT+RFKDRIVSMTLDKEYDVAV+AI+L+TL+L SEE L+ EDCENVYHLVYSAHRPV Sbjct: 375 ELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLVYSAHRPV 434 Query: 425 AVAAGEFLYKKLFSRRDPE-EDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDS 483 AVAAGEFL+KKLFSR DP+ E+ + KRRGR PN NLVK LV FFLESELHEHAAYLVDS Sbjct: 435 AVAAGEFLHKKLFSRHDPQAEEALAKRRGRSSPNGNLVKMLVLFFLESELHEHAAYLVDS 494 Query: 484 MWDCATELLKDWECMNSXXXXXXXXXXXXXTDRQESALIEIMLCTIRQAAECHPPVGRGT 543 +W+ + ELLKDWECM ++RQESAL+E+M+CTIRQAAE HPPVGRGT Sbjct: 495 LWESSQELLKDWECMTELLVEEPMQGEEVMSERQESALVELMVCTIRQAAEAHPPVGRGT 554 Query: 544 GKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTG 603 GKRVLTAKE+KTQLDD+TK+TE F VALP LL+KYS DAEKV NLLQ+PQYFDLE+Y+TG Sbjct: 555 GKRVLTAKERKTQLDDKTKLTEHFIVALPVLLSKYSADAEKVANLLQIPQYFDLELYSTG 614 Query: 604 RLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELAD 663 R+EKHLD+LL+QIR +VEKH ++DVLEACSKTY LC+EE+TI NRV+I+ SQLIDELAD Sbjct: 615 RMEKHLDSLLKQIRFVVEKHIESDVLEACSKTYSILCSEEYTIQNRVEIAHSQLIDELAD 674 Query: 664 KFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENG 723 +F+ +E+ LQE EE DED+ Y V+++LKR+T FHNAHDL+KWD F Y+LL+ GIE+ Sbjct: 675 RFSHAVEELLQEAEEADEDEIYNVMASLKRLTCFHNAHDLTKWDFFGNCYRLLRAGIEHE 734 Query: 724 DMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTTV 783 M EQIV+ ALQC+HY ILWQL KITE + +KE++L L+K ++ F +CQ L+++ T V Sbjct: 735 GMMEQIVVQALQCSHYSILWQLVKITEGNPSKEEMLALRKTVKSFLAVCQQCLSSMTTLV 794 Query: 784 KEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNS 843 KEQAF +LCD+LMIFSHQ+ +GGR+ L LV+ PD LQSELLSF++DHVFI+QDD+N S Sbjct: 795 KEQAFMLLCDLLMIFSHQLTTGGRENLLLLVFNPDVGLQSELLSFVMDHVFIDQDDENQS 854 Query: 844 ADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKET 903 +G +EDEA+KIEALHKRRNLLA+FCKLI+Y +V+MN AADIFK YMKYYNDYGDIIKET Sbjct: 855 MEGDEEDEANKIEALHKRRNLLASFCKLIIYDIVDMNAAADIFKHYMKYYNDYGDIIKET 914 Query: 904 MSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQ 963 +SKTRQ+DKIQCAKTLILSLQQLFNE++QE G N DR+S+ SGIKELARRFALTFGLDQ Sbjct: 915 LSKTRQMDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKELARRFALTFGLDQ 974 Query: 964 LKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLE 1023 +KTREA+A LHKDGIEFAFK NP+G +PPLNLAFL++LSEFSSKLLRQDK+TV+ YLE Sbjct: 975 IKTREAVATLHKDGIEFAFKYQNPKGPEYPPLNLAFLEVLSEFSSKLLRQDKKTVHSYLE 1034 Query: 1024 KFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSV-ISGISSRGSTVRSKKSKPSTGKR 1082 KF+T M RREDVWLPL+SYRNSL+ GGD+D +SV G +S+GS+VRSKK +P K+ Sbjct: 1035 KFLTDLMMERREDVWLPLISYRNSLVTGGDEDRLSVNSGGSNSKGSSVRSKKGRPPLHKK 1094 Query: 1083 KVVEGMQXXXXXXXXXXXXXXXXXXQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMSVY 1142 +V+E T+ TP + TPQLTST++RE R PE Sbjct: 1095 RVIE---------EESIDNSWVTRNDTIQTPGALTTPQLTSTVLRENPRQIPEQ-----I 1140 Query: 1143 PMQTEHHQTPLDY----NTQVTWMLXXXXXXXXXXXXXXXXMSYVKLRTNLQHAIRRGTS 1198 P Q + D+ Q++W+ MSY+K+R+ ++HA+R Sbjct: 1141 PEQESEPSSEPDFLHSPQMQMSWL--GQQKLEDLNRKDRTSMSYMKVRSGVRHAVR---G 1195 Query: 1199 LMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIM 1258 LMEDD EPI EDVMMSS G++ED+NE + DTM IDLPPS+NRRER EL+PDFFD A+I+ Sbjct: 1196 LMEDDAEPIFEDVMMSSRGQLEDMNEEFE-DTMVIDLPPSRNRRERAELRPDFFDSAAII 1254 Query: 1259 -DESVLGVSMF 1268 D+S G+ MF Sbjct: 1255 EDDSGFGMPMF 1265
>gi|29336569|sp|Q9UJ98|SA3_HUMAN Cohesin subunit SA-3 (Stromal antigen 3) (SCC3 homolog 3) Length = 1225 Score = 1026 bits (2653), Expect = 0.0 Identities = 541/1061 (50%), Positives = 726/1061 (68%), Gaps = 39/1061 (3%) Query: 84 LFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQNSE 143 LF VK KS MQS+VD+W++SYK D+D L+L+NFFIQ GCKG+VT EMF+ M NSE Sbjct: 100 LFNAVKAAKSDMQSLVDEWLDSYKQDQDAGFLELVNFFIQSCGCKGIVTPEMFKKMSNSE 159 Query: 144 IIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISL 203 II+ +TE+F+EDSGDYPL GP WKKF+ SFCEF+ LV QCQYS++YD + MD +ISL Sbjct: 160 IIQHLTEQFNEDSGDYPLIAPGPSWKKFQGSFCEFVRTLVCQCQYSLLYDGFPMDDLISL 219 Query: 204 LTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANXX 263 LTGLSDSQVRAFRHTSTLAAMKLMT+LV VAL LS++ DN QRQYEAERNK G+RA Sbjct: 220 LTGLSDSQVRAFRHTSTLAAMKLMTSLVKVALQLSVHQDNNQRQYEAERNKGPGQRAPER 279 Query: 264 XXXXXXXXXXXXXNQDEIENMMNAIFKGVFVHRYRDXXXXXXXXXXXXXXXWMKMYSDAF 323 +Q+EIE MMNA+F+GVFVHRYRD WM+ YS +F Sbjct: 280 LESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIGCWMQSYSTSF 339 Query: 324 LNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTSRFKDRIVSMTLDKE 383 L DSYLKY+GWT+HDK EVR+KC+ AL+GLY N++L ++LELFTSRFKDR+VSM +D+E Sbjct: 340 LTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGNRDLTARLELFTSRFKDRMVSMIMDRE 399 Query: 384 YDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRDPE 443 Y VAV+A++LL L+L++ E +LT DCE+VY +VY ++R +A AAGEFLY KLF + E Sbjct: 400 YSVAVEAVRLLILILKNMEGLLTDADCESVYPVVYPSNRGLASAAGEFLYWKLF-YPECE 458 Query: 444 EDGMMKRRGRQGPNAN--LVKTLVFFFLESELHEHAAYLVDSMWDCATELLKDWECMNSX 501 M R RQ P A + L+ FF+ESELH+HAAYLVDS+WDCA LKDWE + S Sbjct: 459 IRTMGGREQRQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARLKDWEGLTSL 518 Query: 502 XXXXXXXXXXXXTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDRT 561 D QES LIEI++ + RQA+E HPPVGR TG++ LT+KE+KTQ DDR Sbjct: 519 LLEKDQNLG----DVQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQADDRV 574 Query: 562 KITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIVE 621 K+TE LPQLLAK+S DAEKVT LLQL FDL IY TGRLEKHL+ L+Q++ +V Sbjct: 575 KLTEHLIPLLPQLLAKFSADAEKVTPLLQLLSCFDLHIYCTGRLEKHLELFLQQLQEVVV 634 Query: 622 KHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEPDE 681 KH + VLEA + + LCN EFT F+R D +RSQL+D L D+F + LE+ LQ DE Sbjct: 635 KHAEPAVLEAGAHALYLLCNPEFTFFSRADFARSQLVDLLTDRFQQELEELLQS-SFLDE 693 Query: 682 DDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHYVI 741 D+ Y + +TLKR++AF+N HDL++W+L+ +LL+ ++ G++P Q+++ AL ++ I Sbjct: 694 DEVYNLAATLKRLSAFYNTHDLTRWELYEPCCQLLQKAVDTGEVPHQVILPALTLVYFSI 753 Query: 742 LWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTTVKEQAFTILCDILMIFSHQ 801 LW L I++S ++++ L L+ +M FC++CQ L++V+T ++EQAF +L D+L+IFS Q Sbjct: 754 LWTLTHISKSDASQKQLSSLRDRMVAFCELCQSCLSDVDTEIQEQAFVLLSDLLLIFSPQ 813 Query: 802 IMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNSADGQQEDEASKIEALHKR 861 ++ GGRD L PLV+ P+++LQSEL SF++DHVFI Q D S D Q++ +IE LH+R Sbjct: 814 MIVGGRDFLRPLVFFPEATLQSELASFLMDHVFI-QPGDLGSGDSQEDH--LQIERLHQR 870 Query: 862 RNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQIDKIQCAKTLIL 921 R LLA FCKL++Y V+EM+ A+D+FK Y K+YNDYGDIIKET+++ RQID+ C++ L+L Sbjct: 871 RRLLAGFCKLLLYGVLEMDAASDVFKHYNKFYNDYGDIIKETLTRARQIDRSHCSRILLL 930 Query: 922 SLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEFA 981 SL+QL+ E++QE+G F +++LARRFAL+FG QL+ R+ + MLHK+GI+F+ Sbjct: 931 SLKQLYTELLQEHGPQGLNELPAFIEMRDLARRFALSFGPQQLQNRDLVVMLHKEGIQFS 990 Query: 982 FKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWLPL 1041 E P G S+ P NLAFL++LSEFS +L QDK+ + YLEK + +S W P+ Sbjct: 991 LSELPPAGSSNQPPNLAFLELLSEFSPRLFHQDKQLLLSYLEKCLQ-HVSQAPGHPWGPV 1049 Query: 1042 MSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQXXXXXXXXXXXX 1101 +Y +SL S + + T S + PS+ KRK VEG Sbjct: 1050 TTYCHSL------------SPVENTAET--SPQVLPSS-KRKRVEG------PAKPNRED 1088 Query: 1102 XXXXXXQTLHTPVMMQTPQLTSTIM--REP----KRLRPED 1136 ++L + TP LTST + R+P K + ED Sbjct: 1089 VSSSQEESLQLNSIPPTPTLTSTAVKSRQPLWGLKEMEEED 1129
>gi|29336530|sp|O70576|SA3_MOUSE Cohesin subunit SA-3 (Stromal antigen 3) (SCC3 homolog 3) Length = 1240 Score = 996 bits (2576), Expect = 0.0 Identities = 517/1008 (51%), Positives = 697/1008 (69%), Gaps = 32/1008 (3%) Query: 84 LFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQNSE 143 LF+ VK +S MQS+VD+W+++YK D + L+LINFFI+ GCK VT EMF+ M NSE Sbjct: 115 LFDAVKAARSCMQSLVDEWLDNYKQDENAGFLELINFFIRACGCKSTVTPEMFKTMSNSE 174 Query: 144 IIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISL 203 II+ +TEEF+EDSGDYPLT GP WKKF+ SFCEF+ LV QCQYS++YD + MD +ISL Sbjct: 175 IIQHLTEEFNEDSGDYPLTAPGPSWKKFQGSFCEFVKTLVYQCQYSLLYDGFPMDDLISL 234 Query: 204 LTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANXX 263 L GLSDSQVRAFRHTSTLAAMKLMT+LV VAL LS++ DN QRQYEAERNK +RA Sbjct: 235 LIGLSDSQVRAFRHTSTLAAMKLMTSLVKVALQLSLHKDNNQRQYEAERNKGPEQRAPER 294 Query: 264 XXXXXXXXXXXXXNQDEIENMMNAIFKGVFVHRYRDXXXXXXXXXXXXXXXWMKMYSDAF 323 NQ++IE MMNAIF+GVFVHRYRD WM+ YS +F Sbjct: 295 LESLLEKRKEFQENQEDIEGMMNAIFRGVFVHRYRDILPEIRAICIEEIGYWMQSYSTSF 354 Query: 324 LNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTSRFKDRIVSMTLDKE 383 LNDSYLKY+GWT+HDK EVRLKC+ AL GLY N+EL+ ++ELFT+RFKDR+VSM +D+E Sbjct: 355 LNDSYLKYIGWTLHDKHKEVRLKCVKALAGLYSNQELSLRMELFTNRFKDRMVSMVMDRE 414 Query: 384 YDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRDPE 443 +VAV+AI+LLTL+L++ E VLT+ DCE +Y +VY ++R +A +AGEF+Y K+F PE Sbjct: 415 CEVAVEAIRLLTLILKNMEGVLTSADCEKIYSIVYISNRAMASSAGEFVYWKIFH---PE 471 Query: 444 --EDGMMKRRGRQGPNAN--LVKTLVFFFLESELHEHAAYLVDSMWDCATELLKDWECMN 499 + R R+ P A + L+ FF+ESE H HAAYLVDS+WDCA LKDWE + Sbjct: 472 CGAKAVSDRERRRSPQAQKTFIYLLLAFFMESEHHNHAAYLVDSLWDCAGSYLKDWESLT 531 Query: 500 SXXXXXXXXXXXXXTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDD 559 + D QE LIEI + + RQAAE HPPVGR TGK+ LTAKE+K Q D Sbjct: 532 NLLLQKDQNLG----DMQERMLIEIPVSSARQAAEGHPPVGRITGKKSLTAKERKLQAYD 587 Query: 560 RTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNI 619 + K+ E LPQLL K+S DAE V LLQL YFDL IY T RLEKHL+ LL+Q++ + Sbjct: 588 KMKLAEHLIPLLPQLLDKFSADAENVAPLLQLLSYFDLSIYCTQRLEKHLELLLQQLQEV 647 Query: 620 VEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEP 679 V KH + +VLEA + + LC EFT F+RVD +RSQL+D L D+F + L+D +Q Sbjct: 648 VVKHVEPEVLEAAAHALYLLCKPEFTFFSRVDFARSQLVDFLTDRFQQELDDLMQS-SFL 706 Query: 680 DEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHY 739 DED+ Y + +TLKR++AF+NAHDL++W++ +LL+ ++ G++P Q+++ AL ++ Sbjct: 707 DEDEVYSLTATLKRLSAFYNAHDLTRWEISEPCSRLLRKAVDTGEVPHQVILPALTLVYF 766 Query: 740 VILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTTVKEQAFTILCDILMIFS 799 ILW + I+ES+S K+ L+ LKK+M FC++CQ L++V+ ++EQAF +L D+L+IFS Sbjct: 767 SILWTVTHISESTSHKQ-LMSLKKRMVAFCELCQSCLSDVDPEIQEQAFVLLSDLLLIFS 825 Query: 800 HQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNSADGQQEDEASKIEALH 859 Q++ GGRD L PLV+ P+++LQSEL SF++DHVF++ + N GQ +++ +IE LH Sbjct: 826 PQMIVGGRDFLRPLVFFPEATLQSELASFLMDHVFLQPGELGN---GQSQEDHVQIELLH 882 Query: 860 KRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQIDKIQCAKTL 919 +RR LLA FCKL++Y V+E++ A+D+FK Y K+Y DYGDIIKET+++ RQID+ QC++ L Sbjct: 883 QRRRLLAGFCKLLLYGVLELDAASDVFKHYNKFYEDYGDIIKETLTRARQIDRCQCSRIL 942 Query: 920 ILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIE 979 +LSL+QL+ E+IQE G F +++LARRFAL+FG QL R+ + MLHK+GI+ Sbjct: 943 LLSLKQLYTELIQEQGPQGLTELPAFIEMRDLARRFALSFGPQQLHNRDLVVMLHKEGIK 1002 Query: 980 FAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWL 1039 F+ E P G SH P NLAFL++LSEFS +L QDKR + YLEK + ++S W Sbjct: 1003 FSLSELPPAGSSHEPPNLAFLELLSEFSPRLFHQDKRLLLSYLEKCLQ-RVSKAPNHPWG 1061 Query: 1040 PLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEG 1087 P+ +Y +SL + + + S RG P K+K VEG Sbjct: 1062 PVTTYCHSL------HPLEITAEGSPRG---------PPHSKKKCVEG 1094
>gi|29336522|sp|Q99M76|SA3_RAT Cohesin subunit SA-3 (Stromal antigen 3) (SCC3 homolog 3) Length = 1256 Score = 996 bits (2576), Expect = 0.0 Identities = 506/969 (52%), Positives = 687/969 (70%), Gaps = 17/969 (1%) Query: 84 LFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQNSE 143 LF+ VK +S QS+VD+W+E+YK D + L+L+NFFI+ GCK VT EMF+ M NSE Sbjct: 115 LFDAVKAARSCAQSLVDEWLENYKQDENAGFLELVNFFIRACGCKSTVTPEMFKTMSNSE 174 Query: 144 IIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISL 203 II+ +TEEF+EDSGDYPLT GP WKKF+ SFCEF+ LV QCQYS+++D + MD +ISL Sbjct: 175 IIQHLTEEFNEDSGDYPLTAPGPSWKKFQGSFCEFVKTLVCQCQYSLLFDGFPMDDLISL 234 Query: 204 LTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANXX 263 L GLSDSQVRAFRHTSTLAAMKLMT+LV VAL LS++ DN QRQYEAERNK +RA Sbjct: 235 LIGLSDSQVRAFRHTSTLAAMKLMTSLVKVALQLSLHKDNNQRQYEAERNKGPEQRAPER 294 Query: 264 XXXXXXXXXXXXXNQDEIENMMNAIFKGVFVHRYRDXXXXXXXXXXXXXXXWMKMYSDAF 323 NQ+EIE MMNAIF+GVFVHRYRD WM+ YS +F Sbjct: 295 LESLLEKRKEFQENQEEIEGMMNAIFRGVFVHRYRDILPEIRAVCIEEIGCWMQSYSTSF 354 Query: 324 LNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTSRFKDRIVSMTLDKE 383 LNDSYLKY+GWT+HDK EVRLKC+ AL GLY N+EL+S++ELFT+RFKDR+VSM +D+E Sbjct: 355 LNDSYLKYIGWTLHDKHKEVRLKCVKALAGLYSNQELSSRMELFTNRFKDRMVSMVMDRE 414 Query: 384 YDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRDPE 443 +VAV+AI+LLTL+L++ E VLT+ DCE +Y +VY ++R +A +AGEF+Y K+F PE Sbjct: 415 SEVAVEAIRLLTLILKNMEGVLTSADCEKIYSIVYISNRAMASSAGEFVYWKIFH---PE 471 Query: 444 --EDGMMKRRGRQGPNAN--LVKTLVFFFLESELHEHAAYLVDSMWDCATELLKDWECMN 499 + R R+ P A + L+ FF+ESE H+HAAYLVDS+WDCA LKDWE + Sbjct: 472 CGAKAVSGRERRRSPQAQRTFIYLLLAFFMESEHHDHAAYLVDSLWDCAGSYLKDWESLT 531 Query: 500 SXXXXXXXXXXXXXTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDD 559 S D QE LIEI++ + RQAAE HPPVGR TGK+ LTAKE+K Q D Sbjct: 532 SLLLQKDQNLG----DMQERMLIEILVSSARQAAEGHPPVGRITGKKSLTAKERKLQAYD 587 Query: 560 RTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNI 619 + K+ E LPQLLAK+S DAE V LL+L YFDL IY T RLEKHL+ LL+Q++ + Sbjct: 588 KVKLAEHLIPLLPQLLAKFSADAENVAPLLRLLSYFDLNIYCTQRLEKHLELLLQQLQEV 647 Query: 620 VEKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEP 679 V KH + +VLEA + + LC EFT F+RVD +RSQL+D L D+F + L+D +Q Sbjct: 648 VVKHVEPEVLEAAAHALYLLCKPEFTFFSRVDFARSQLVDLLTDRFQQELDDLMQS-SFL 706 Query: 680 DEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHY 739 DED+ Y + +TLKR++AF+NAHDL++W++ +LL+ ++ G++P Q+++ AL ++ Sbjct: 707 DEDEVYSLTATLKRLSAFYNAHDLTRWEISEPCSRLLRKAVDTGEVPHQVILPALTLVYF 766 Query: 740 VILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTTVKEQAFTILCDILMIFS 799 ILW + I+ES+S K+ L+ LKK+M FC++CQ L++V+ ++EQAF +L D+L+IFS Sbjct: 767 SILWTVTHISESTSQKQ-LMSLKKRMVAFCELCQSCLSDVDPEIQEQAFVLLSDLLLIFS 825 Query: 800 HQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNSADGQQEDEASKIEALH 859 Q++ GGRD L PLV+ P+++LQSEL SF++DHVF++ + N GQ +++ +IE LH Sbjct: 826 PQMVVGGRDFLRPLVFFPEATLQSELASFLMDHVFLQPGELGN---GQSQEDHVQIELLH 882 Query: 860 KRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQIDKIQCAKTL 919 +RR LLA FCKL++Y V+E++ A+D+FK Y K+Y DYGDIIKET+++ RQID+ QC++ L Sbjct: 883 QRRRLLAGFCKLLLYGVLELDAASDVFKHYNKFYEDYGDIIKETLTRARQIDRCQCSRIL 942 Query: 920 ILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIE 979 +LSL+QL+ E+IQE G F +++LARRFAL+FG QL R+ + MLHK+GI+ Sbjct: 943 LLSLKQLYTELIQEQGPQDLTELPAFIEMRDLARRFALSFGPQQLHNRDLVVMLHKEGIK 1002 Query: 980 FAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWL 1039 F+ E P G S P N+AFL++LSEFS +L QDK+ + YLEK + ++S+ W Sbjct: 1003 FSLSELPPAGSSREPPNIAFLELLSEFSPRLFHQDKQLLLSYLEKCLQ-RVSMAPSHPWG 1061 Query: 1040 PLMSYRNSL 1048 P+ +Y +SL Sbjct: 1062 PVTTYCHSL 1070
>gi|19855048|sp|O13816|SCC3_SCHPO Cohesin subunit psc3 (SCC3 homolog) Length = 978 Score = 114 bits (286), Expect = 1e-24 Identities = 84/332 (25%), Positives = 137/332 (41%), Gaps = 26/332 (7%) Query: 84 LFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVT----------A 133 LF + K + W Y D AL +LINF ++C GC + + Sbjct: 87 LFAFLLDQKVDTMDIAVSWFADYAKDNQSALANLINFILKCCGCNRAINVFDVQDQDSAS 146 Query: 134 EMFRHMQNS--------EIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQ 185 +Q S +I+ F + DYPL +++ F+ + V Q Sbjct: 147 ATLSQIQLSVERVSAFAKILYLYINNFKTSTRDYPLNSKNLKFRNFRKRLTGLLSNFVSQ 206 Query: 186 CQY-SIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNT 244 + +Y+ + + ++S + +S S +R RHT+T+ + +MT L + L Sbjct: 207 LSIRNYLYNSTVFEDIMSWVVAMSSSTMRPIRHTATVFCLNIMTFLCEKSKELLNEHAIA 266 Query: 245 QRQYEAE--RNKMIGKRANXXXXXXXXXXXXXXXNQDEIENMMNAIFKGVFVHRYRDXXX 302 +Q E E R+++ R N QD + +N F VFVHRYRD Sbjct: 267 TKQLEKEEKRSRVNRNRINELNNSLGEIVK----QQDTLTTYLNDYFDSVFVHRYRDVEP 322 Query: 303 XXXXXXXXXXXXWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNS 362 W+ F + SYL+Y+GW + D VRL + L+ + Sbjct: 323 KIRVDCLQELGVWINTVPSIFFSGSYLRYLGWMLSDINTTVRLTVVKVLRKFFETDSFIG 382 Query: 363 KLELFTSRFKDRIVSMT-LDKEYDVAVQAIKL 393 L F+SRFK+RI+ M+ +D + V V +I+L Sbjct: 383 GLRHFSSRFKERILEMSCVDADIGVRVASIRL 414
>gi|731791|sp|P40541|SCC3_YEAST Cohesin subunit SCC3 (Irregular cell behavior protein 1) Length = 1150 Score = 81.6 bits (200), Expect = 1e-14 Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 31/341 (9%) Query: 84 LFEVVKMGKS-AMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVT-AEMFRHMQN 141 LF+++ + +++ ++ +W+E+Y +RD L + IN + C G V ++ + + Sbjct: 137 LFDILSTSEDVSIEELLREWLETYSENRDKFLQEFINLLLNCCGSVARVEDHDVHSNESS 196 Query: 142 SEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKS--------SFCEFIGVLVRQCQ-YSIIY 192 +E I ++ F + + KK K+ +F EF+ L+ ++Y Sbjct: 197 NETIGEIQLLFQRQKLHEFYLLISKENKKRKNFKMGPLYQNFAEFMTKLLEVANDLQLLY 256 Query: 193 DEYMMDT--------VISLLTGLSD---SQVRAFRHTSTLAAMKLMTALVNVALNLSIN- 240 E D V+ LLT LS ++R FR+ STL L A+NL N Sbjct: 257 VESDEDDTQIVTGNLVLDLLTWLSSFSVCKIRCFRYISTLTLYLFQDYLTQQAVNLEKNY 316 Query: 241 MDNTQRQYEAERNKMIGKRANXXXXXXXXXXXXXXXNQDEIENMMNAIFKGVFVHRYRDX 300 + +Q E K + N ++ I+++++ I K FVHRY+D Sbjct: 317 LAKLSKQLSLEEKKK--RPNNKTLEKLESTIAETQGSKVVIDSIIDNIVKLCFVHRYKDV 374 Query: 301 XXXXXXXXXXXXXXWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKEL 360 W+K Y + FL ++LKY GW + D VRL+ L L Sbjct: 375 SDLIRSESMLHLSIWIKNYPEYFLKVTFLKYFGWLLSDNSVSVRLQVTKILPHLIIQNHN 434 Query: 361 -----NSKLELFTSRFKDRIVSMTL-DKEYDVAVQAIKLLT 395 NS + RFK +I+ + + D DV + +I++LT Sbjct: 435 SKSTDNSAIRQVFERFKTKILEVAIRDVNLDVRIHSIQVLT 475
>gi|3915379|sp|O25505|ENGA_HELPY GTP-binding protein engA Length = 458 Score = 35.0 bits (79), Expect = 1.1 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 591 LPQYFDLEIYTTGRLEKHLDALLR--QIRNIVEKHTDTDVLEACSKTYHALCNE--EFTI 646 +P+ F++ + + +DA+L + I+E+ D D+LE+ +AL E + I Sbjct: 142 MPKSFNISVSHNRGISALIDAVLSALDLNQIIEQDLDADILESLETPNNALEEEIIQVGI 201 Query: 647 FNRVDISRSQLIDELADKFNRLL 669 RV++ +S L++ L K L+ Sbjct: 202 IGRVNVGKSSLLNALTKKERSLV 224
>gi|13124138|sp|Q9KPC5|ENO_VIBCH Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) Length = 433 Score = 33.5 bits (75), Expect = 3.1 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 10/70 (14%) Query: 655 SQLIDELADKFNRL-LEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNY 713 S ++EL +KF + +ED L E + E AYQ K+I + DLF N Sbjct: 275 SDFLEELTEKFPIVSIEDGLDESDW--EGFAYQTEKLGKKIQIVGD-------DLFVTNT 325 Query: 714 KLLKTGIENG 723 K+LK GI+NG Sbjct: 326 KILKRGIDNG 335
>gi|24418590|sp|Q8RFN7|PGK_FUSNN Phosphoglycerate kinase Length = 398 Score = 32.7 bits (73), Expect = 5.5 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%) Query: 1196 GTSLMEDDEEPIVEDVMMSSEGRI---------EDLNEGMDFDTMDID-LPPSKNRRERT 1245 GTSL+EDD+ + +D++ S G+I + ++F T+D+D +P +K + Sbjct: 241 GTSLVEDDKLDLAKDLLAKSNGKIVLPVDTVIASEFKNDIEFSTVDVDNIPNNKMGLDIG 300 Query: 1246 ELKPDFFD 1253 E FD Sbjct: 301 EKTVTLFD 308
>gi|24212001|sp|Q979T0|MOAA_THEVO Probable molybdenum cofactor biosynthesis protein A Length = 326 Score = 32.7 bits (73), Expect = 5.5 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 9/79 (11%) Query: 1011 LRQDKRTVYVYLEKFMTFQMSLRREDVWLPLMSYR---------NSLLAGGDDDTMSVIS 1061 LR+D + + K++T +S+ V LP+++Y N + D+DT I+ Sbjct: 70 LRRDLIDIVKRIRKYITGNISMTTNGVMLPILAYELKKAGLDRVNISMHAFDEDTFQAIT 129 Query: 1062 GISSRGSTVRSKKSKPSTG 1080 G++SR +++ + G Sbjct: 130 GVNSRDRIIKAIDAANEAG 148
>gi|29839249|sp|Q8GE63|ENO_AERHY Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) Length = 433 Score = 32.7 bits (73), Expect = 6.6 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 10/70 (14%) Query: 655 SQLIDELADKFNRL-LEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNY 713 S ++EL KF + +ED L E + E AYQ K+I + DLF N Sbjct: 275 SDFLEELTAKFPIVSIEDGLDESDW--EGFAYQTQKLGKKIQIVGD-------DLFVTNT 325 Query: 714 KLLKTGIENG 723 K+LK GI+NG Sbjct: 326 KILKRGIDNG 335
>gi|3914404|sp|O29548|PPSA_ARCFU Probable phosphoenolpyruvate synthase (Pyruvate,water dikinase) (PEP synthase) Length = 753 Score = 32.0 bits (71), Expect = 9.5 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%) Query: 582 AEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIVEK-HTDTDVLEACSKTYHALC 640 AEK+ +LL+ +L++ T + LDA+ R+IR I+EK D+ + Y LC Sbjct: 55 AEKIYSLLR-----ELDVEDT----EKLDAVSREIREIIEKTEMPEDIEREIREAYRKLC 105 Query: 641 NEE 643 EE Sbjct: 106 EEE 108
Database: Non-redundant SwissProt sequences Posted date: Mar 9, 2004 2:01 PM Number of letters in database: 53,526,777 Number of sequences in database: 145,815 Lambda K H 0.320 0.134 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,775,868 Number of Sequences: 145815 Number of extensions: 866069 Number of successful extensions: 2398 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 2383 Number of HSP's gapped (non-prelim): 12 length of query: 1268 length of database: 53,526,777 effective HSP length: 121 effective length of query: 1147 effective length of database: 35,883,162 effective search space: 41157986814 effective search space used: 41157986814 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 71 (32.0 bits)
