NCBI Conserved Domain Search
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RPS-BLAST 2.2.8 [Jan-05-2004]

Query= local sequence: hg16_dna|GENSCAN_predicted_peptide_4|
         (391 letters)

Database: cdd.v1.65
           18,039 PSSMs; 5,506,404 total columns
gnl|CDD|18532 KOG0738, KOG0738, AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]gnl|CDD|18532 KOG0738, KOG0738, AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]gnl|CDD|18533 KOG0739, KOG0739, AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]gnl|CDD|18534 KOG0740, KOG0740, AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]gnl|CDD|18531 KOG0737, KOG0737, AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]gnl|CDD|18524 KOG0730, KOG0730, AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]gnl|CDD|18524 KOG0730, KOG0730, AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]gnl|CDD|10337 COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]gnl|CDD|10337 COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]gnl|CDD|10940 COG1222, RPT1, ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones]gnl|CDD|18530 KOG0736, KOG0736, Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones]gnl|CDD|18530 KOG0736, KOG0736, Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones]gnl|CDD|18527 KOG0733, KOG0733, Nuclear AAA ATPase (VCP subfamily) [Posttranslational modification, protein turnover, chaperones]