BLASTP 2.2.8 [Jan-05-2004]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1078930930-6959-172650786443.BLASTQ3

Query= hg16_dna_6|geneid_v1.1_predicted_protein_6|242_AA
         (241 letters)


Database: Non-redundant SwissProt sequences 
           145,815 sequences; 53,526,777 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs

Taxonomy reports

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|124240|sp|P08069|IG1R_HUMAN  Insulin-like growth factor I...    35   0.10  
gi|1175258|sp|P44011|Y523_HAEIN  Hypothetical protein HI0523...    33   0.60  
gi|2827762|sp|P24062|IG1R_RAT  Insulin-like growth factor I ...    31   2.2   
gi|12644455|sp|Q60751|IG1R_MOUSE  Insulin-like growth factor...    31   2.3   
gi|34098561|sp|Q8G5L0|GLGB_BIFLO  1,4-alpha-glucan branching...    30   3.9   
gi|34098492|sp|Q88FN1|GLGB_PSEPK  1,4-alpha-glucan branching...    30   4.9   

Alignments


>gi|124240|sp|P08069|IG1R_HUMAN   Insulin-like growth factor I receptor precursor (CD221 antigen)
          Length = 1367

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 16/115 (13%)

Query: 7   RTLRRLWQ-DHQ--TLSRGKMDFHFGKYKIVFVLPYETTGASGRRGCTVRCVTRLGNHVA 63
           + L++LW  DH+  T+  GKM F F   K+     Y     +G +G       R      
Sbjct: 426 QNLQQLWDWDHRNLTIKAGKMYFAFNP-KLCVSEIYRMEEVTGTKG-------RQSKGDI 477

Query: 64  QTSPTGFYCNNKLDLLIQIQVTTTAGSKSRVQVTWHTDAEADWQSLAN--AYYQE 116
            T   G   + + D+L     T+T  SK+R+ +TWH     D++ L +   YY+E
Sbjct: 478 NTRNNGERASCESDVL---HFTSTTTSKNRIIITWHRYRPPDYRDLISFTVYYKE 529



>gi|1175258|sp|P44011|Y523_HAEIN   Hypothetical protein HI0523 precursor
          Length = 356

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 123 DTNSVFIKQPGLQEKAFDVGNFPNLPSVAAFSKPGGV------LGCS-IRSSGSTEPISL 175
           D N V    PG  EKA+++ N  N   VA + K  G+      L C+ +  +GST P+ L
Sbjct: 224 DCNVVLTAGPGESEKAYELANLVNDLRVAIYDKNKGLVDFAHSLACADLFIAGSTGPLHL 283

Query: 176 RTSM-IVNKAVLSRERSVTTKDW 197
            ++  I         RS   + W
Sbjct: 284 SSAFNIPTIGFYPNSRSSQPRRW 306



>gi|2827762|sp|P24062|IG1R_RAT   Insulin-like growth factor I receptor precursor
          Length = 1370

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 16/115 (13%)

Query: 7   RTLRRLWQ-DHQTLS--RGKMDFHFGKYKIVFVLPYETTGASGRRGCTVRCVTRLGNHVA 63
           + L++LW  +H+ L+   GKM F F   K+     Y     +G +G       R      
Sbjct: 427 QNLQQLWDWNHRNLTVRSGKMYFAFNP-KLCVSEIYRMEEVTGTKG-------RQSKGDI 478

Query: 64  QTSPTGFYCNNKLDLLIQIQVTTTAGSKSRVQVTWHTDAEADWQSLAN--AYYQE 116
            T   G   + + D+L   + T+T   K+R+ +TWH     D++ L +   YY+E
Sbjct: 479 NTRNNGERASCESDVL---RFTSTTTWKNRIIITWHRYRPPDYRDLISFTVYYKE 530



>gi|12644455|sp|Q60751|IG1R_MOUSE   Insulin-like growth factor I receptor precursor
          Length = 1373

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 16/115 (13%)

Query: 7   RTLRRLWQ-DHQTLS--RGKMDFHFGKYKIVFVLPYETTGASGRRGCTVRCVTRLGNHVA 63
           + L++LW  +H+ L+   GKM F F   K+     Y     +G +G       R      
Sbjct: 427 QNLQQLWDWNHRNLTVRSGKMYFAFNP-KLCVSEIYRMEEVTGTKG-------RQSKGDI 478

Query: 64  QTSPTGFYCNNKLDLLIQIQVTTTAGSKSRVQVTWHTDAEADWQSLAN--AYYQE 116
            T   G   + + D+L   + T+T   K+R+ +TWH     D++ L +   YY+E
Sbjct: 479 NTRNNGERASCESDVL---RFTSTTTWKNRIIITWHRYRPPDYRDLISFTVYYKE 530



>gi|34098561|sp|Q8G5L0|GLGB_BIFLO   1,4-alpha-glucan branching enzyme (Glycogen branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 737

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)

Query: 98  WHTDAEADWQSLANAYYQEENPGIKDTNSVFIKQPGLQEKAFDVGNFPNLPS 149
           W  DA  DW  L    +++    + D N+ +   P L  + FD   F  L S
Sbjct: 591 WDHDASIDWDCLNWQEHRQVQTMVADLNAFYKAHPALWSQDFDPAGFQWLTS 642



>gi|34098492|sp|Q88FN1|GLGB_PSEPK   1,4-alpha-glucan branching enzyme (Glycogen branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 736

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 98  WHTDAEADWQSLANAYYQEENPGIKDTNSVFIKQPGLQEK 137
           W+ DAE DW  L    +Q     + D N ++ ++P L E+
Sbjct: 590 WNHDAELDWYLLQYPEHQGVQRLVGDLNRLYREEPALHEQ 629






  Database: Non-redundant SwissProt sequences
    Posted date:  Mar 9, 2004  2:01 PM
  Number of letters in database: 53,526,777
  Number of sequences in database:  145,815
  
Lambda     K      H
   0.317    0.130    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,898,420
Number of Sequences: 145815
Number of extensions: 192815
Number of successful extensions: 359
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 359
Number of HSP's gapped (non-prelim): 1
length of query: 241
length of database: 53,526,777
effective HSP length: 106
effective length of query: 135
effective length of database: 38,070,387
effective search space: 5139502245
effective search space used: 5139502245
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)