RID=1079462633-12147-175649382981.BLASTQ3, gi|30774134|

BLASTX 2.2.8 [Jan-05-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
RID: 1079462633-12147-175649382981.BLASTQ3
Query= gi|30774134| (938 letters)
Database: Non-redundant SwissProt sequences 145,815 sequences; 53,526,777 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Taxonomy reports
Distribution of 53 Blast Hits on the Query Sequence


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|728837|sp|P39194|ALU7_HUMAN  Alu subfamily SQ sequence co...    63   8e-10 
gi|728838|sp|P39195|ALU8_HUMAN  Alu subfamily SX sequence co...    62   2e-09 
gi|728835|sp|P39192|ALU5_HUMAN  Alu subfamily SC sequence co...    61   4e-09 
gi|728836|sp|P39193|ALU6_HUMAN  Alu subfamily SP sequence co...    59   2e-08 
gi|728832|sp|P39189|ALU2_HUMAN  Alu subfamily SB sequence co...    56   1e-07 
gi|728833|sp|P39190|ALU3_HUMAN  Alu subfamily SB1 sequence c...    56   1e-07 
gi|728831|sp|P39188|ALU1_HUMAN  Alu subfamily J sequence con...    53   1e-06 
gi|728834|sp|P39191|ALU4_HUMAN  Alu subfamily SB2 sequence c...    49   2e-05 
gi|37537897|sp|Q96J02|ITCH_HUMAN  Itchy homolog E3 ubiquitin...    43   0.001 
gi|1709347|sp|P51957|NEK4_HUMAN  Serine/threonine-protein ki...    41   0.004 
gi|29427916|sp|Q92918|M4K1_HUMAN  Mitogen-activated protein ...    41   0.004 
gi|1174572|sp|P21731|TA2R_HUMAN  Thromboxane A2 receptor (TX...    40   0.007 
gi|20981712|sp|Q9Y2Z2|MTO1_HUMAN  MTO1 protein homolog (CGI-02)    37   0.048 
gi|33301030|sp|Q8TDM0|BCS4_HUMAN  Breast carcinoma amplified...    37   0.048 
gi|12643706|sp|P97469|SLUG_MOUSE  Zinc finger protein SLUG (...    33   1.2   
gi|13431835|sp|O43556|SGCE_HUMAN  Epsilon-sarcoglycan precur...    32   1.6   
gi|3123058|sp|Q55563|Y163_SYNY3  Hypothetical WD-repeat prot...    32   2.0   
gi|11134406|sp|O43623|SLUG_HUMAN  Zinc finger protein SLUG (...    31   3.5   
gi|32363278|sp|Q879Y6|RHLB_XYLFT  ATP-dependent RNA helicase...    30   7.7   
gi|1350799|sp|P49646|YYY1_HUMAN  Very very hypothetical prot...    30   7.7   
gi|2501668|sp|Q13474|DRP2_HUMAN  Dystrophin-related protein 2      30   7.7   

Alignments


>gi|728837|sp|P39194|ALU7_HUMAN   Alu subfamily SQ sequence contamination warning entry
          Length = 593

 Score = 63.2 bits (152), Expect = 8e-10
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = +1

Query: 244 SVSXVAQPRVQWRYFGSL*PPPPGFKQFFCFSVPSSWDYSR 366
           S + VAQ  VQWR  GSL PPPPGFK+F C S+PSSWDY R
Sbjct: 304 SFALVAQAGVQWRDLGSLQPPPPGFKRFSCLSLPSSWDYRR 344



 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = -1

Query: 365 RL*SQLLGTLKQKNCLNPGGGGYSEPK*RHCTLGWATXETL 243
           RL SQLLG L+Q+N LNPGGGG SEP+ RHCT  WAT   L
Sbjct: 152 RLXSQLLGRLRQENRLNPGGGGCSEPRSRHCTPAWATRAKL 192



 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
 Frame = -2

Query: 406 EPRLASA*QSAPG---GGCNPSYLGR*SRRIA*TREAEVIVSRNSAIAL*AGRXVKRLV 239
           +PRL    ++ PG   G CNPSY G   RRIA TREAEV VSR+ A AL  G+  +  V
Sbjct: 234 KPRLYXKYKNXPGVVAGACNPSYSGGXGRRIAXTREAEVAVSRDRATALQPGQQERNSV 292



 Score = 47.0 bits (110), Expect = 6e-05
 Identities = 22/36 (61%), Positives = 24/36 (66%)
 Frame = +2

Query: 260 PSLECNGAISAHYNLRLPGXXXXXXXXXQVAGITAA 367
           P LEC+GAISAH NLRLPG         +VAGIT A
Sbjct: 409 PRLECSGAISAHCNLRLPGSSDSPASASRVAGITGA 444



 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 25/36 (69%), Positives = 27/36 (75%)
 Frame = +3

Query: 261 PA*SAMALFRLTITSASRVQAILLLQRPK*LGLQPP 368
           P  SA+A  RLT TSASRVQAILL Q P+ LGLQ P
Sbjct: 508 PGWSAVARSRLTATSASRVQAILLPQPPEXLGLQAP 543



>gi|728838|sp|P39195|ALU8_HUMAN   Alu subfamily SX sequence contamination warning entry
          Length = 591

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 27/37 (72%), Positives = 29/37 (78%)
 Frame = +1

Query: 256 VAQPRVQWRYFGSL*PPPPGFKQFFCFSVPSSWDYSR 366
           VAQ  VQWR  GSL PPPPGFK+F C S+PSSWDY R
Sbjct: 504 VAQAGVQWRDLGSLQPPPPGFKRFSCLSLPSSWDYRR 540



 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = -1

Query: 365 RL*SQLLGTLKQKNCLNPGGGGYSEPK*RHCTLGWAT 255
           RL SQLLG L+Q+N LNPGGGG SEP+ RHCT  WAT
Sbjct: 151 RLXSQLLGRLRQENRLNPGGGGCSEPRSRHCTPAWAT 187



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 23/37 (62%), Positives = 25/37 (67%)
 Frame = +2

Query: 257 SPSLECNGAISAHYNLRLPGXXXXXXXXXQVAGITAA 367
           SP LEC+GAISAH NLRLPG         +VAGIT A
Sbjct: 307 SPRLECSGAISAHCNLRLPGSSDSPASASRVAGITGA 343



 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
 Frame = -2

Query: 406 EPRLASA*QSAPG---GGCNPSYLGR*SRRIA*TREAEVIVSRNSAIAL*AGR 257
           +PRL    ++ PG     CNPSY G   RRIA TREAEV VSR+ A AL  GR
Sbjct: 233 KPRLYXKYKNXPGVVARACNPSYSGGXGRRIAXTREAEVAVSRDRATALQPGR 285



 Score = 43.1 bits (100), Expect = 9e-04
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = +3

Query: 258 RPA*SAMALFRLTITSASRVQAILLLQRPK*LGLQ 362
           RP  SA+A  RLT TSASRVQAILL Q P+ LGLQ
Sbjct: 406 RPGWSAVARSRLTATSASRVQAILLPQPPEXLGLQ 440



>gi|728835|sp|P39192|ALU5_HUMAN   Alu subfamily SC sequence contamination warning entry
          Length = 585

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 27/40 (67%), Positives = 29/40 (72%)
 Frame = +1

Query: 247 VSXVAQPRVQWRYFGSL*PPPPGFKQFFCFSVPSSWDYSR 366
           VS   Q  VQWR  GSL PPPPGFK+F C S+PSSWDY R
Sbjct: 398 VSLCRQAGVQWRDLGSLQPPPPGFKRFSCLSLPSSWDYRR 437



 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 27/40 (67%), Positives = 30/40 (75%)
 Frame = -1

Query: 365 RL*SQLLGTLKQKNCLNPGGGGYSEPK*RHCTLGWATXET 246
           RL SQLLG L+Q+N LNPGGGG SEP+ RHCT  W   ET
Sbjct: 247 RLXSQLLGRLRQENRLNPGGGGCSEPRSRHCTPAWRQSET 286



 Score = 42.7 bits (99), Expect = 0.001
 Identities = 20/34 (58%), Positives = 22/34 (64%)
 Frame = +2

Query: 266 LECNGAISAHYNLRLPGXXXXXXXXXQVAGITAA 367
           LEC+GAISAH NLRLPG         +VAG T A
Sbjct: 502 LECSGAISAHCNLRLPGSSDSPASASRVAGTTGA 535



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 24/34 (70%), Positives = 26/34 (76%)
 Frame = +3

Query: 261 PA*SAMALFRLTITSASRVQAILLLQRPK*LGLQ 362
           P  SA+A  RLT TSASRVQAILL Q P+ LGLQ
Sbjct: 305 PGWSAVARSRLTATSASRVQAILLPQPPEXLGLQ 338



 Score = 40.0 bits (92), Expect = 0.007
 Identities = 22/34 (64%), Positives = 24/34 (70%)
 Frame = -2

Query: 361 CNPSYLGR*SRRIA*TREAEVIVSRNSAIAL*AG 260
           C+PSY G   RRIA TREAEV VSR+ A AL  G
Sbjct: 53  CSPSYSGGXGRRIAXTREAEVAVSRDRATALQPG 86



>gi|728836|sp|P39193|ALU6_HUMAN   Alu subfamily SP sequence contamination warning entry
          Length = 593

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 26/39 (66%), Positives = 29/39 (74%)
 Frame = +1

Query: 244 SVSXVAQPRVQWRYFGSL*PPPPGFKQFFCFSVPSSWDY 360
           S + VAQ  VQWR  GS  PPPPGFK+F C S+PSSWDY
Sbjct: 304 SFALVAQAGVQWRDLGSPQPPPPGFKRFSCLSLPSSWDY 342



 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 25/38 (65%), Positives = 28/38 (73%)
 Frame = -1

Query: 356 SQLLGTLKQKNCLNPGGGGYSEPK*RHCTLGWATXETL 243
           SQLLG L+Q+N LNPGGGG  EP+ RHCT  WAT   L
Sbjct: 155 SQLLGRLRQENRLNPGGGGCGEPRSRHCTPAWATRAKL 192



 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
 Frame = -2

Query: 406 EPRLASA*QSAPG---GGCNPSYLGR*SRRIA*TREAEVIVSRNSAIAL*AGRXVKRLV 239
           +PRL    ++ PG     CNPSY G   RRIA TREAEV VSR+ AIAL  G+  +  V
Sbjct: 234 KPRLYXKYKNXPGVVAHACNPSYSGGXGRRIAXTREAEVAVSRDRAIALQPGQQERNSV 292



 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 22/34 (64%), Positives = 23/34 (67%)
 Frame = +2

Query: 260 PSLECNGAISAHYNLRLPGXXXXXXXXXQVAGIT 361
           P LECNGAISAH NLRLPG         +VAGIT
Sbjct: 409 PRLECNGAISAHRNLRLPGSSDSPASASRVAGIT 442



 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/34 (73%), Positives = 26/34 (76%)
 Frame = +3

Query: 261 PA*SAMALFRLTITSASRVQAILLLQRPK*LGLQ 362
           P  SAMA  RLT TSASRVQAILL Q P+ LGLQ
Sbjct: 508 PGWSAMARSRLTATSASRVQAILLPQPPEXLGLQ 541



>gi|728832|sp|P39189|ALU2_HUMAN   Alu subfamily SB sequence contamination warning entry
          Length = 587

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 25/37 (67%), Positives = 26/37 (70%)
 Frame = +1

Query: 256 VAQPRVQWRYFGSL*PPPPGFKQFFCFSVPSSWDYSR 366
           VAQ  VQWR  GSL  PPPGF  F C S+PSSWDY R
Sbjct: 501 VAQAGVQWRDLGSLQAPPPGFTPFSCLSLPSSWDYRR 537



 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -1

Query: 365 RL*SQLLGTLKQKNCLNPGGGGYSEPK*RHCTLGWAT 255
           RL SQLLG L+Q+N +NPGGG  SEP+ RHCT  WAT
Sbjct: 248 RLXSQLLGRLRQENGVNPGGGACSEPRSRHCTPAWAT 284



 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
 Frame = -2

Query: 406 EPRLASA*QSAPG---GGCNPSYLGR*SRRIA*TREAEVIVSRNSAIAL*AGR 257
           +PRL    ++ PG   G C+PSY G   RR+A TREAE+ VSR+ A AL  GR
Sbjct: 35  KPRLYXKYKNXPGVVAGACSPSYSGGXGRRMAXTREAELAVSRDRATALQPGR 87



 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 21/37 (56%), Positives = 23/37 (62%)
 Frame = +2

Query: 257 SPSLECNGAISAHYNLRLPGXXXXXXXXXQVAGITAA 367
           SP LEC+GAISAH  LRLPG         +VAG T A
Sbjct: 305 SPRLECSGAISAHCKLRLPGSRHSPASASRVAGTTGA 341



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 24/37 (64%), Positives = 27/37 (72%)
 Frame = +3

Query: 258 RPA*SAMALFRLTITSASRVQAILLLQRPK*LGLQPP 368
           RP  SA+A  RLT +SASRV AILL Q P+ LGLQ P
Sbjct: 404 RPGWSAVARSRLTASSASRVHAILLPQPPEXLGLQAP 440



>gi|728833|sp|P39190|ALU3_HUMAN   Alu subfamily SB1 sequence contamination warning entry
          Length = 587

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 25/37 (67%), Positives = 26/37 (70%)
 Frame = +1

Query: 256 VAQPRVQWRYFGSL*PPPPGFKQFFCFSVPSSWDYSR 366
           VAQ  VQWR  GSL  PPPGF  F C S+PSSWDY R
Sbjct: 501 VAQAGVQWRDLGSLQAPPPGFTPFSCLSLPSSWDYRR 537



 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -1

Query: 365 RL*SQLLGTLKQKNCLNPGGGGYSEPK*RHCTLGWAT 255
           RL SQLLG L+Q+N +NPGGG  SEP+ RHCT  WAT
Sbjct: 248 RLXSQLLGRLRQENGVNPGGGACSEPRSRHCTPAWAT 284



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
 Frame = -2

Query: 406 EPRLASA*QSAPG---GGCNPSYLGR*SRRIA*TREAEVIVSRNSAIAL*AGR 257
           +PRL    ++ PG   G C+PSYLG   RR+A TREAE+ VSR+ A AL  GR
Sbjct: 35  KPRLYXKYKNXPGVVAGACSPSYLGGXGRRMAXTREAELAVSRDPATALQPGR 87



 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +2

Query: 257 SPSLECNGAISAHYNLRLPGXXXXXXXXXQVAGITAA-SWSRLL 385
           SP LEC+G ISAH  LRLPG         QVAG T A  ++RL+
Sbjct: 305 SPRLECSGGISAHCKLRLPGSRHSPASASQVAGTTGARHYARLI 348



 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/37 (67%), Positives = 27/37 (72%)
 Frame = +3

Query: 258 RPA*SAMALFRLTITSASRVQAILLLQRPK*LGLQPP 368
           RP  SA+A  RLT +SASRV AILL Q PK LGLQ P
Sbjct: 404 RPGWSAVAGSRLTASSASRVHAILLPQPPKXLGLQAP 440



>gi|728831|sp|P39188|ALU1_HUMAN   Alu subfamily J sequence contamination warning entry
          Length = 591

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 24/37 (64%), Positives = 26/37 (70%)
 Frame = +1

Query: 256 VAQPRVQWRYFGSL*PPPPGFKQFFCFSVPSSWDYSR 366
           VAQ  VQWR  GSL P PPG K+  C S+PSSWDY R
Sbjct: 504 VAQAGVQWRDHGSLQPRPPGLKRSSCLSLPSSWDYRR 540



 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = -1

Query: 365 RL*SQLLGTLKQKNCLNPGGGGYSEPK*RHCTLGWAT 255
           RL SQLLG L+Q++ L+PGG G SEP  RHCT  WAT
Sbjct: 151 RLXSQLLGRLRQEDRLSPGGRGCSEPXSRHCTPAWAT 187



 Score = 40.8 bits (94), Expect = 0.004
 Identities = 20/42 (47%), Positives = 24/42 (57%)
 Frame = +2

Query: 242 QAFHXSPSLECNGAISAHYNLRLPGXXXXXXXXXQVAGITAA 367
           Q    SP LEC+GAI+AH +L LPG         +VAG T A
Sbjct: 302 QGLALSPRLECSGAITAHCSLDLPGSSDPPASASRVAGTTGA 343



 Score = 40.8 bits (94), Expect = 0.004
 Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
 Frame = -2

Query: 406 EPRLASA*QSAPG---GGCNPSYLGR*SRRIA*TREAEVIVSRNSAIAL*AGRXVKRL 242
           +PRL    ++ PG     C+PSY G   RRIA  RE E  VSR+ A AL  GR  + L
Sbjct: 233 KPRLYKKYKNXPGVVARACSPSYSGGXGRRIAXAREVEAAVSRDRATALQPGRQSETL 290



 Score = 38.1 bits (87), Expect = 0.028
 Identities = 22/35 (62%), Positives = 24/35 (68%)
 Frame = +3

Query: 258 RPA*SAMALFRLTITSASRVQAILLLQRPK*LGLQ 362
           RP  SA+A  RLT  S SR QAILL Q P+ LGLQ
Sbjct: 406 RPGWSAVARSRLTAASTSRAQAILLPQPPEXLGLQ 440



>gi|728834|sp|P39191|ALU4_HUMAN   Alu subfamily SB2 sequence contamination warning entry
          Length = 603

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
 Frame = +1

Query: 133 GSWRS-GHSKWGISEVLMK*LSLNTGINTQHPAVKSTPSV----SXVAQPR----VQWRY 285
           G WR  G      +E+     ++  G  ++ P+ K         S    PR    +QWR 
Sbjct: 265 GEWREPGKRSLQXAEIAPLQSAVRPGRQSETPSQKKXXXFFLRRSLALSPRPDCGLQWRN 324

Query: 286 FGSL*PPPPGFKQFFCFSVPSSWDYSR 366
            GSL  P PGF  F C S+PSSWDY R
Sbjct: 325 LGSLQAPLPGFTPFSCLSLPSSWDYRR 351



 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -1

Query: 365 RL*SQLLGTLKQKNCLNPGGGGYSEPK*RHCT 270
           RL SQLLG L+Q+N +NPG G  SEP+ RHC+
Sbjct: 52  RLXSQLLGRLRQENGVNPGSGACSEPRLRHCS 83



 Score = 39.3 bits (90), Expect = 0.013
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = -2

Query: 376 APGGGCNPSYLGR*SRRIA*TREAEVIVSRNSAIAL 269
           A  G C+PSY G   RR+A TREAE+ VSR+ A A+
Sbjct: 149 AVAGACSPSYWGGXGRRMAXTREAELAVSRDCATAV 184



 Score = 38.1 bits (87), Expect = 0.028
 Identities = 22/36 (61%), Positives = 26/36 (72%)
 Frame = +3

Query: 270 SAMALFRLTITSASRVQAILLLQRPK*LGLQPPPGA 377
           +A+A  RLT +SASRV AILL Q P+ LGLQ P  A
Sbjct: 521 TAVAQSRLTASSASRVHAILLPQPPQXLGLQAPATA 556



 Score = 35.0 bits (79), Expect = 0.24
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 269 ECNGAISAHYNLRLPGXXXXXXXXXQVAGITAA 367
           +C+GAISAH  LR PG          VAG T A
Sbjct: 420 DCSGAISAHCKLRFPGSRHSPASASPVAGTTGA 452



>gi|37537897|sp|Q96J02|ITCH_HUMAN   Itchy homolog E3 ubiquitin protein ligase (Itch)
           (Atrophin-1-interacting protein 4) (AIP4)
           (NFE2-associated polypeptide 1) (NAPP1)
          Length = 903

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 21/37 (56%), Positives = 22/37 (59%)
 Frame = +2

Query: 260 PSLECNGAISAHYNLRLPGXXXXXXXXXQVAGITAAS 370
           P LECN AISAH NL LPG         +VAG T AS
Sbjct: 166 PRLECNSAISAHCNLCLPGLSDSPISASRVAGFTGAS 202



>gi|1709347|sp|P51957|NEK4_HUMAN   Serine/threonine-protein kinase Nek4 (NimA-related protein kinase
           4) (Serine/threonine protein kinase 2)
           (Serine/threonine-protein kinase NRK2)
          Length = 841

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 20/40 (50%), Positives = 23/40 (57%)
 Frame = +2

Query: 242 QAFHXSPSLECNGAISAHYNLRLPGXXXXXXXXXQVAGIT 361
           Q+   SP LEC+G I AH NLRL G         +VAGIT
Sbjct: 456 QSLALSPKLECSGTILAHSNLRLLGSSDSPASASRVAGIT 495



>gi|29427916|sp|Q92918|M4K1_HUMAN   Mitogen-activated protein kinase kinase kinase kinase 1 (MAPK/ERK
           kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1)
           (Hematopoietic progenitor kinase)
          Length = 833

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 19/35 (54%), Positives = 21/35 (60%)
 Frame = +2

Query: 257 SPSLECNGAISAHYNLRLPGXXXXXXXXXQVAGIT 361
           SP LEC+G IS H NL LPG         +VAGIT
Sbjct: 797 SPRLECSGTISPHCNLLLPGSSNSPASASRVAGIT 831



>gi|1174572|sp|P21731|TA2R_HUMAN   Thromboxane A2 receptor (TXA2-R) (Prostanoid TP receptor)
          Length = 369

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 23/34 (67%), Positives = 26/34 (76%)
 Frame = +3

Query: 261 PA*SAMALFRLTITSASRVQAILLLQRPK*LGLQ 362
           PA S +A  RLT TSASRVQAIL+ Q P+ LGLQ
Sbjct: 335 PAWSTVARSRLTATSASRVQAILVPQPPEQLGLQ 368



>gi|20981712|sp|Q9Y2Z2|MTO1_HUMAN   MTO1 protein homolog (CGI-02)
          Length = 717

 Score = 37.4 bits (85), Expect = 0.048
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +2

Query: 260 PSLECNGAISAHYNLRLPG 316
           P +ECNGAISAH+NL LPG
Sbjct: 384 PRMECNGAISAHHNLPLPG 402



>gi|33301030|sp|Q8TDM0|BCS4_HUMAN   Breast carcinoma amplified sequence 4
          Length = 211

 Score = 37.4 bits (85), Expect = 0.048
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = +2

Query: 263 SLECNGAISAHYNLRLPGXXXXXXXXXQVAGIT 361
           ++EC+G I A  NLRLPG         QVAGIT
Sbjct: 163 NVECSGTIPARCNLRLPGSSDSPASASQVAGIT 195



>gi|12643706|sp|P97469|SLUG_MOUSE   Zinc finger protein SLUG (Neural crest transcription factor Slug)
           (Snail homolog 2)
          Length = 269

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +3

Query: 357 LQPPPGADC*ADASLGSASPLVSEESRPRRQGQAPNSDYPFYREKKKIPCLLCSK 521
           + PPP +D  +    GS SP+  EE R +     P    P   E +K  C LC+K
Sbjct: 87  VSPPPSSDTSSKDHSGSESPISDEEERLQ-----PKLSDPHAIEAEKFQCNLCNK 136



>gi|13431835|sp|O43556|SGCE_HUMAN   Epsilon-sarcoglycan precursor (Epsilon-SG)
          Length = 438

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 15/23 (65%), Positives = 16/23 (69%)
 Frame = +1

Query: 244 SVSXVAQPRVQWRYFGSL*PPPP 312
           S + VAQ  VQWR  GSL PPPP
Sbjct: 396 SFAPVAQAGVQWRDLGSLQPPPP 418



>gi|3123058|sp|Q55563|Y163_SYNY3   Hypothetical WD-repeat protein SLL0163
          Length = 1693

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +2

Query: 14  WYRSGIPG---IFEGGEGVKMVRGFHGWERYTPYTF*PTGRGEEAGGQ 148
           WY + I G   IF+ GE  ++ R    WE++T +    TG  EE   Q
Sbjct: 45  WYTTAIAGDVLIFDAGEKEQLARVLQQWEQFTGHVILITGLTEEPDPQ 92



>gi|11134406|sp|O43623|SLUG_HUMAN   Zinc finger protein SLUG (Neural crest transcription factor Slug)
           (Snail homolog 2)
          Length = 268

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 21/55 (38%), Positives = 28/55 (50%)
 Frame = +3

Query: 357 LQPPPGADC*ADASLGSASPLVSEESRPRRQGQAPNSDYPFYREKKKIPCLLCSK 521
           + PPP +D  +    GS SP+  EE R     Q+  SD P   E +K  C LC+K
Sbjct: 86  VSPPPPSDTSSKDHSGSESPISDEEERL----QSKLSD-PHAIEAEKFQCNLCNK 135



>gi|32363278|sp|Q879Y6|RHLB_XYLFT   ATP-dependent RNA helicase rhlB
          Length = 543

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 21/48 (43%), Positives = 25/48 (52%)
 Frame = -2

Query: 466 ELGACPCLLGRDSSETSGEAEPRLASA*QSAPGGGCNPSYLGR*SRRI 323
           E+G    L  R  S  SGE+   +A+A Q A   G  PS LGR  RRI
Sbjct: 489 EVGRNIGLRRRSRSMDSGESGHVVATADQVAAKSGSQPSLLGRIGRRI 536



>gi|1350799|sp|P49646|YYY1_HUMAN   Very very hypothetical protein RMSA-1
          Length = 418

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 317 NPGGGGYSEPK*RHCTLGWATXETL 243
           +PGG G +E +  HCT  W T ET+
Sbjct: 243 DPGGRGCNELRSCHCTPAWVTSETV 267



>gi|2501668|sp|Q13474|DRP2_HUMAN   Dystrophin-related protein 2
          Length = 954

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +3

Query: 288  RLTITSASRVQAILLLQRPK*LGLQPPPGADC*ADASLGSA---SPLVSEESRPRRQGQ 455
            R+ I      Q    LQR + L LQPP  +D     S GS+   SP  SE S PR +GQ
Sbjct: 849  RMQILEDHNKQLESQLQRLRELLLQPPTESD--GSGSAGSSLASSPQQSEGSHPREKGQ 905






  Database: Non-redundant SwissProt sequences
    Posted date:  Mar 9, 2004  2:01 PM
  Number of letters in database: 53,526,777
  Number of sequences in database:  145,815
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,038,204
Number of Sequences: 145815
Number of extensions: 382713
Number of successful extensions: 973
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 53,526,777
effective HSP length: 109
effective length of database: 37,632,942
effective search space used: 7639487226
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)