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Differences found in the number of nucleotides are indicated in different colors: in green are pointed up numbers differing in 1 or 2 nucleotides and in red those numbers differing in more than 2 nucleotides.

The differences are coloured taking as a reference Telford values.

Gens^* EHV-1 EHV-4 % Identity^& Characteristics Comments Gens^*

Entry MedLine:M86664 Telford, 1998 FindOrf 2003 version 1.0 Entry MedLine:AF030027 Telford, 1998 FindOrf 2003 version 1.0
Start Stop Codon Start Stop Codon Start Stop Codon Start Stop Codon Start Stop Codon Start Stop Codon

1 1298 1906 202 1298 1906 202 1298 1906 202 944 1543 199 944 1543 199 944 1543 199 72.2 C-terminal hydrofobic domain - 1

2 2562 1945 205 2562 1945 205 2562 1945 205 2206 1580 280 2206 1580 208 2221 1580 213 71.7 C-terminal hydrofobic domain - 2

3 2841 3614 257 2841 3614 257 2841 3614 257 2457 3227 256 2457 3227 256 2457 3227 256 74.6 - - 3

4 4249 3647 200 4249 3647 200 4249 3647 200 3864 3262 200 3864 3262 200 3864 3262 200 87.0 - - 4

5 5874 4462 470 5874 4462 470 5874 4462 470 5484 4081 467 5484 4081 467 5484 4081 467 77.3 Post-translational regulator of gene expression - 5

6 7042 6011 343 7042 6011 343 7042 6011 343 6649 5618 343 6649 5618 343 6649 5618 343 89.5 Glycoprotein (gK) - 6

7 10301 7056 1081 10301 7056 1081 10301 7056 1081 9900 6658 1080 9900 6658 1080 9900 6658 1080 80.2 Component of DNA helicase-primase complex - 7

8 10300 11037 245 10300 11037 245 10300 11037 245 9899 10633 244 9899 10633 244 9899 10633 244 84.0 - - 8

9 12115 11135 326 12115 11135 326 12115 11135 326 11702 10722 326 11702 10722 326 11702 10722 326 77.6 Deoxyuridine triphosphatase - 9

10 12084 12386 100 12084 12386 100 12084 12386 100 11671 11973 100 11671 11973 100 11671 11973 100 88.0 Envelope protein - 10

11 12549 13463 304 12549 13463 304 12549 13463 304 12128 13042 304 12128 13042 304 12128 13042 304 78.0 Tegument protein - 11

12 13505 14944 479 13595 14944 449 13505 14944 479 13173 14519 448 13173 14519 448 13155 14519 454 86.6 Tegument protein; transactivator of immediate-early genes - 12

13 15317 17932 871 15317 17932 871 15317 17932 871 14890 17484 869 14890 17484 864 14890 17484 864 85.3 Tegument protein - 13

14 18083 20326 747 18083 20326 747 18083 20326 747 17633 19864 743 17633 19864 743 17633 19864 743 79.0 Tegument protein - 14

15 21146 20487 219 21170 20487 227 21170 20487 227 20698 20018 226 20698 20018 226 20698 20018 226 69.0 Tegument/Envelope protein - 15

16 22851 21445 468 22851 21445 468 22851 21445 468 22396 20939 485 22396 20939 485 22396 20939 485 81.4 Envelope glycoprotein (gC); role in cell entry - 16

17 24234 23029 401 24234 23029 401 24234 23029 401 23786 22575 403 23786 22575 403 23786 22575 403 84.3 Probable integral membrane protein - 17

18 25696 24479 405 25696 24479 405 25696 24479 405 25222 24002 406 25222 24002 406 25222 24002 406 83.5 Processitivity subunit of replicate DNA polymerase - 18

19 26262 27755 497 26262 27755 497 26262 27755 497 25765 27255 496 25765 27255 496 25765 27255 496 84.5 Tegument protein; host shut-off factor - 19

20 28859 27894 321 28859 27894 321 28859 27894 321 28324 27362 320 28324 27362 320 28324 27362 320 89.7 Small subunit of ribonucleotide reductase - 20

21 31276 28904 790 31276 28904 790 31276 28904 790 30732 28636 789 30732 28363 789 30732 28363 789 88.3 Large subunit of ribonucleotide reductase - 21

22 32916 31519 465 32916 31519 465 32916 31519 465 32355 30967 462 32355 30967 462 32355 30967 462 91.8 Capsid protein; component of intercapsomeric triplex - 22

23 33292 36354 1020 33292 36354 1020 33292 36354 1020 32712 35777 1021 32712 35777 1021 32712 35777 1021 89.1 Tegument protein - 23

24 36588 46853 3421 36588 46853 3421 36588 46853 3421 36006 46610 3534 36006 46610 3534 36006 46610 3534 78.7 Very large tegument protein - 24

25 47311 46952 119 47311 46952 119 47311 46952 119 47068 46709 119 47068 46709 119 47068 46709 119 88.2 Capsid protein; located on tips of hexons - 25

26 48230 47403 275 48230 47403 275 48230 47403 275 47980 47156 274 47980 47156 274 47980 47156 274 90.9 Membrane-associated phosphoprotein - 26

27 48857 48369 162 48791 48369 140 48857 48369 162 48543 48124 139 48543 48124 139 48543 48124 139 79.1 Role in DNA packaging - 27

28 48763 50625 620 48763 50625 620 48763 50625 620 48515 50365 616 48515 50365 616 48515 50365 616 80.0 Role in DNA packaging - 28

29 50618 51598 326 50618 51598 326 50618 51598 326 50358 51338 326 50358 51338 326 50358 51338 326 91.7 - - 29

30 55184 51522 1220 55184 51522 1220 55184 51522 1220 54924 51262 1220 54924 51262 1220 54924 51262 1220 88.3 Catalitic subunit of replicative DNA polymerase - 30

31 55453 59082 1209 55453 59082 1209 55453 59082 1209 55178 58804 1208 55178 58804 1208 55178 58804 1208 90.6 Single-stranded DNA-binding protein - 31

32 59243 61570 775 59243 61570 775 59243 61570 775 58964 61285 773 58964 61285 773 58964 61285 773 88.0 Role in DNA packaging - 32

33 61432 64374 980 61432 64374 980 61432 64374 980 61147 64074 975 61147 64074 975 61147 64074 975 89.6 Envelope glycoprotein (gB); role in cell entry - 33

34 64578 65060 160 64578 65060 160 64578 65060 160 64268 64750 160 64268 64750 160 64268 64750 160 73.0 - - 34

35 67093 65153 646 67093 65153 646 67093 65153 646 66770 64827 647 66770 64827 647 66770 64827 647 87.8 N-terminal protease domain acts in capsid maduration and is a capsid protein - 35

35.5 66142 65153 329 66142 65153 329 - - - 65822 64827 331 65822 64827 331 - - - 83.9 Major capsid scaffold protein Fragment integrated in orf number 35 35.5

36 68975 67212 587 68975 67212 587 68975 67212 587 68648 66885 587 68648 66885 587 68648 66885 587 90.3 Role in DNA packaging - 36

37 69897 69079 272 69897 69079 272 69897 69079 272 69567 68749 272 69567 68749 272 69567 68749 272 83.5 - - 37

38 69910 70968 352 69910 70968 352 69910 70968 352 69582 70640 352 69582 70640 352 69582 70640 352 88.9 Thymidine kinase - 38

39 71192 73738 848 71192 73738 848 71192 73738 848 70858 73425 855 70858 73425 855 70858 73425 855 85.7 Envelope glycoprotein (gH); role in cell entry - 39

40 76224 76632 530 76224 74632 530 76224 74632 530 75832 74243 529 75832 74243 529 75832 74243 529 86.6 Tegument protein - 40

41 76793 77512 239 76793 77512 239 76793 77512 239 76399 77112 237 76399 77112 237 76399 77112 237 87.8 Integral membrane protein; role in virion egress - 41

42 77703 81833 1376 77703 81833 1376 77703 81833 1376 77301 81428 1375 77301 81428 1375 77301 81428 1375 96.4 Major capsid protein; component of hexons and pentons - 42

43 82083 83027 314 82083 83027 314 82083 83027 314 81661 82605 314 81661 82605 314 81661 82605 314 94.6 Capsid protein; component of intercapsomeric triplex - 43

44 84319 83148 390 84320 83148 390 84319 83148 390 83875 82703 390 83875 82703 390 83653 82703 734 93.7 Role in DNA packaging; putative terminase Due to alternative splicing it�s joined with orf number 47 44

45 84480 86600 706 84480 86600 706 84480 86600 706 84037 86157 706 84037 86157 706 84037 86157 706 82.3 - - 45

46 86620 87732 370 86620 87732 370 86620 87732 370 86176 87285 369 86176 87285 369 86176 87285 369 85.9 Tegument protein - 46

47 88917 87885 344 88917 87886 343 88917 87885 344 88469 87438 343 88469 87438 343 88469 87411 352 93.7 Role in DNA packaging; putative terminase Due to alternative splicing it�s joined with orf number 44 47

48 88947 89900 317 88947 89900 317 88947 89900 317 88499 89464 321 88499 89464 321 88499 89464 321 74.1 - - 48

49 89369 91153 594 89369 91153 594 89369 91153 594 88921 90717 598 88921 90717 598 88921 90717 598 85.8 Tegument protein; probable serine-threonine protein kinase - 49

50 91305 92831 508 91135 92832 565 91305 92831 508 90699 82396 565 90699 92396 565 90699 92396 565 88.7 Deoxyribonuclease; role in maturation/packaging of DNA - 50

51 92783 93007 74 92784 93008 74 - - - 92348 92575 75 92348 92575 75 92348 92575 75 84.7 Myristylated tegument protein; role in virion envelopment Not predicted in EHV-1 with FindOrf 2003 version 1.0 51

52 94471 93119 450 94472 93120 450 94471 93119 450 94033 92681 450 94033 92681 450 94033 92681 450 86.7 Envelope glycoprotein (gM) - 52

53 94389 97052 887 94390 97053 887 94389 97052 887 93951 96614 887 93951 96614 887 93951 96614 887 91.1 Origin-binding protein; helicase - 53

54 97173 99323 716 97069 99324 751 97068 99323 751 96626 98881 751 96626 98881 751 96626 98881 751 79.2 Component of DNA helicase-primase complex - 54

55 100331 99420 303 100332 99421 303 100331 99420 303 99850 98942 302 99850 98942 302 99850 98942 302 84.4 - - 55

56 102390 100129 753 102391 100130 753 102390 100129 753 101891 99648 747 101891 99648 747 101891 99648 747 89.4 Minor capsid protein; role in DNA packaging - 56

57 102374 105019 881 102375 105020 881 102374 105019 881 101875 104517 880 101875 104517 880 101875 104517 880 92.6 Component of DNA helicase-primase complex; helicase - 57

58 105069 105746 225 105070 105747 225 105069 105746 225 104567 105250 227 104567 105250 227 104567 105250 227 83.9 - - 58

59 106415 105876 179 106416 105877 179 106415 105876 179 105918 105358 186 105918 105358 186 105917 105366 183 69.5 - - 59

60 107115 106477 212 107116 106478 212 107115 106477 212 106606 105971 211 106606 105971 211 106606 105971 211 89.1 - - 60

61 108143 107205 312 108144 107206 312 108143 107205 312 107640 106696 314 107640 106696 314 107640 106696 314 78.5 Uracil-DNA glycosylase - 61

62 108802 108146 218 108803 108147 218 108802 108146 218 108296 107637 219 108296 107637 219 108296 107637 219 74.2 Envelope glycoprotein (gL); complexes with gH - 62

63 111984 110386 532 111985 110387 532 111984 110386 532 111713 110103 536 111713 110103 536 111785 110103 560 62.3 Transcriptional regulator - 63

64 118590 114127 1487 118591 114128 1487 118590 114127 1487 117422 113094 1442 117422 113093 1442 117422 113094 1442 84.2 Transcriptional regulator Found in normal and complementary sense 64

144569 149032 144568 149031 140628 144956 140628 144956

65 121367 122248 293 121368 122249 293 121367 122248 293 120069 120923 284 120069 120923 284 120069 120923 284 85.2 Hoste range determinant Found in normal and complementary sense 65

141792 140911 283 141791 190910 137981 137127 137981 137127

66 122861 123571 236 122862 123572 236 122861 123571 236 121447 122133 228 121447 122133 228 121354 122133 259 80.3 Virion protein Found in normal and complementary sense 66

140298 139588 140297 139587 136603 135917 136696 135917

67 125193 124375 272 125194 124376 272 125193 124375 272 123491 122631 286 123491 122631 286 123491 122631 286 68.0 Virulence determinant Found in normal and complementary sense 67

137966 138784 137965 138783

68 126274 125018 418 126275 125019 418 126274 125018 418 124559 123585 324 124559 123585 324 124559 123585 324 60.0 - - 68

69 126410 127558 382 126411 127559 382 126410 127558 382 124695 125849 384 124695 125849 384 124695 125849 384 86.9 Serine-threonine protein kinase - 69

70 127680 128915 411 127681 128916 411 127680 128915 411 125970 127277 435 125970 127277 435 125970 127277 435 72.2 Envelope glycoprotein (gG) - 70

71 129096 131489 797 129097 131490 797 129096 131489 797 127455 129707 750 127455 129707 750 127455 129707 750 61.1 Envelope glycoprotein (gp300) - 71

72 131432 132790 452 131583 132791 402 131432 132790 452 129798 131006 402 129798 131006 402 129798 131006 402 76.6 Envelope glycoprotein (gD); role in cell entry - 72

73 132898 134172 424 132899 134173 424 132898 134172 424 131111 132373 420 131111 132373 420 131111 132373 420 74.0 Envelope glycoprotein (gI) - 73

74 134405 136057 550 134406 136058 550 134405 136057 550 132593 134239 548 132593 134239 548 132593 134239 548 85.4 Envelope glycoprotein (gE) - 74

75 136054 136446 130 136055 136447 130 136054 136446 130 134273 134605 110 134273 134605 110 134273 134605 110 59.3 - - 75

76 136782 137441 219 136783 137442 219 136782 137441 219 134911 135573 220 134911 135573 220 134911 135573 220 54.9 Tegument protein - 76

Gens^* Start Stop Codon Start Stop Codon Start Stop Codon Start Stop Codon Start Stop Codon Start Stop Codon % Identity^& Characteristics Comments Gens^*

MedLine Entry:M86664 Telford, 1998 FindOrf 2003 version 1.0 MedLine Entry:AF030027 Telford, 1998 FindOrf 2003 version 1.0
EHV-1 EHV-4

Gens^*	EHV-1	EHV-4	% Identity^&	Characteristics	Comments	Gens^*
Entry MedLine:M86664	Telford, 1998	FindOrf 2003 version 1.0	Entry MedLine:AF030027	Telford, 1998	FindOrf 2003 version 1.0
Start	Stop	Codon	Start	Stop	Codon	Start	Stop	Codon	Start	Stop	Codon	Start	Stop	Codon	Start	Stop	Codon
1	1298	1906	202	1298	1906	202	1298	1906	202	944	1543	199	944	1543	199	944	1543	199	72.2	C-terminal hydrofobic domain	-	1
2	2562	1945	205	2562	1945	205	2562	1945	205	2206	1580	280	2206	1580	208	2221	1580	213	71.7	C-terminal hydrofobic domain	-	2
3	2841	3614	257	2841	3614	257	2841	3614	257	2457	3227	256	2457	3227	256	2457	3227	256	74.6	-	-	3
4	4249	3647	200	4249	3647	200	4249	3647	200	3864	3262	200	3864	3262	200	3864	3262	200	87.0	-	-	4
5	5874	4462	470	5874	4462	470	5874	4462	470	5484	4081	467	5484	4081	467	5484	4081	467	77.3	Post-translational regulator of gene expression	-	5
6	7042	6011	343	7042	6011	343	7042	6011	343	6649	5618	343	6649	5618	343	6649	5618	343	89.5	Glycoprotein (gK)	-	6
7	10301	7056	1081	10301	7056	1081	10301	7056	1081	9900	6658	1080	9900	6658	1080	9900	6658	1080	80.2	Component of DNA helicase-primase complex	-	7
8	10300	11037	245	10300	11037	245	10300	11037	245	9899	10633	244	9899	10633	244	9899	10633	244	84.0	-	-	8
9	12115	11135	326	12115	11135	326	12115	11135	326	11702	10722	326	11702	10722	326	11702	10722	326	77.6	Deoxyuridine triphosphatase	-	9
10	12084	12386	100	12084	12386	100	12084	12386	100	11671	11973	100	11671	11973	100	11671	11973	100	88.0	Envelope protein	-	10
11	12549	13463	304	12549	13463	304	12549	13463	304	12128	13042	304	12128	13042	304	12128	13042	304	78.0	Tegument protein	-	11
12	13505	14944	479	13595	14944	449	13505	14944	479	13173	14519	448	13173	14519	448	13155	14519	454	86.6	Tegument protein; transactivator of immediate-early genes	-	12
13	15317	17932	871	15317	17932	871	15317	17932	871	14890	17484	869	14890	17484	864	14890	17484	864	85.3	Tegument protein	-	13
14	18083	20326	747	18083	20326	747	18083	20326	747	17633	19864	743	17633	19864	743	17633	19864	743	79.0	Tegument protein	-	14
15	21146	20487	219	21170	20487	227	21170	20487	227	20698	20018	226	20698	20018	226	20698	20018	226	69.0	Tegument/Envelope protein	-	15
16	22851	21445	468	22851	21445	468	22851	21445	468	22396	20939	485	22396	20939	485	22396	20939	485	81.4	Envelope glycoprotein (gC); role in cell entry	-	16
17	24234	23029	401	24234	23029	401	24234	23029	401	23786	22575	403	23786	22575	403	23786	22575	403	84.3	Probable integral membrane protein	-	17
18	25696	24479	405	25696	24479	405	25696	24479	405	25222	24002	406	25222	24002	406	25222	24002	406	83.5	Processitivity subunit of replicate DNA polymerase	-	18
19	26262	27755	497	26262	27755	497	26262	27755	497	25765	27255	496	25765	27255	496	25765	27255	496	84.5	Tegument protein; host shut-off factor	-	19
20	28859	27894	321	28859	27894	321	28859	27894	321	28324	27362	320	28324	27362	320	28324	27362	320	89.7	Small subunit of ribonucleotide reductase	-	20
21	31276	28904	790	31276	28904	790	31276	28904	790	30732	28636	789	30732	28363	789	30732	28363	789	88.3	Large subunit of ribonucleotide reductase	-	21
22	32916	31519	465	32916	31519	465	32916	31519	465	32355	30967	462	32355	30967	462	32355	30967	462	91.8	Capsid protein; component of intercapsomeric triplex	-	22
23	33292	36354	1020	33292	36354	1020	33292	36354	1020	32712	35777	1021	32712	35777	1021	32712	35777	1021	89.1	Tegument protein	-	23
24	36588	46853	3421	36588	46853	3421	36588	46853	3421	36006	46610	3534	36006	46610	3534	36006	46610	3534	78.7	Very large tegument protein	-	24
25	47311	46952	119	47311	46952	119	47311	46952	119	47068	46709	119	47068	46709	119	47068	46709	119	88.2	Capsid protein; located on tips of hexons	-	25
26	48230	47403	275	48230	47403	275	48230	47403	275	47980	47156	274	47980	47156	274	47980	47156	274	90.9	Membrane-associated phosphoprotein	-	26
27	48857	48369	162	48791	48369	140	48857	48369	162	48543	48124	139	48543	48124	139	48543	48124	139	79.1	Role in DNA packaging	-	27
28	48763	50625	620	48763	50625	620	48763	50625	620	48515	50365	616	48515	50365	616	48515	50365	616	80.0	Role in DNA packaging	-	28
29	50618	51598	326	50618	51598	326	50618	51598	326	50358	51338	326	50358	51338	326	50358	51338	326	91.7	-	-	29
30	55184	51522	1220	55184	51522	1220	55184	51522	1220	54924	51262	1220	54924	51262	1220	54924	51262	1220	88.3	Catalitic subunit of replicative DNA polymerase	-	30
31	55453	59082	1209	55453	59082	1209	55453	59082	1209	55178	58804	1208	55178	58804	1208	55178	58804	1208	90.6	Single-stranded DNA-binding protein	-	31
32	59243	61570	775	59243	61570	775	59243	61570	775	58964	61285	773	58964	61285	773	58964	61285	773	88.0	Role in DNA packaging	-	32
33	61432	64374	980	61432	64374	980	61432	64374	980	61147	64074	975	61147	64074	975	61147	64074	975	89.6	Envelope glycoprotein (gB); role in cell entry	-	33
34	64578	65060	160	64578	65060	160	64578	65060	160	64268	64750	160	64268	64750	160	64268	64750	160	73.0	-	-	34
35	67093	65153	646	67093	65153	646	67093	65153	646	66770	64827	647	66770	64827	647	66770	64827	647	87.8	N-terminal protease domain acts in capsid maduration and is a capsid protein	-	35
35.5	66142	65153	329	66142	65153	329	-	-	-	65822	64827	331	65822	64827	331	-	-	-	83.9	Major capsid scaffold protein	Fragment integrated in orf number 35	35.5
36	68975	67212	587	68975	67212	587	68975	67212	587	68648	66885	587	68648	66885	587	68648	66885	587	90.3	Role in DNA packaging	-	36
37	69897	69079	272	69897	69079	272	69897	69079	272	69567	68749	272	69567	68749	272	69567	68749	272	83.5	-	-	37
38	69910	70968	352	69910	70968	352	69910	70968	352	69582	70640	352	69582	70640	352	69582	70640	352	88.9	Thymidine kinase	-	38
39	71192	73738	848	71192	73738	848	71192	73738	848	70858	73425	855	70858	73425	855	70858	73425	855	85.7	Envelope glycoprotein (gH); role in cell entry	-	39
40	76224	76632	530	76224	74632	530	76224	74632	530	75832	74243	529	75832	74243	529	75832	74243	529	86.6	Tegument protein	-	40
41	76793	77512	239	76793	77512	239	76793	77512	239	76399	77112	237	76399	77112	237	76399	77112	237	87.8	Integral membrane protein; role in virion egress	-	41
42	77703	81833	1376	77703	81833	1376	77703	81833	1376	77301	81428	1375	77301	81428	1375	77301	81428	1375	96.4	Major capsid protein; component of hexons and pentons	-	42
43	82083	83027	314	82083	83027	314	82083	83027	314	81661	82605	314	81661	82605	314	81661	82605	314	94.6	Capsid protein; component of intercapsomeric triplex	-	43
44	84319	83148	390	84320	83148	390	84319	83148	390	83875	82703	390	83875	82703	390	83653	82703	734	93.7	Role in DNA packaging; putative terminase	Due to alternative splicing it�s joined with orf number 47	44
45	84480	86600	706	84480	86600	706	84480	86600	706	84037	86157	706	84037	86157	706	84037	86157	706	82.3	-	-	45
46	86620	87732	370	86620	87732	370	86620	87732	370	86176	87285	369	86176	87285	369	86176	87285	369	85.9	Tegument protein	-	46
47	88917	87885	344	88917	87886	343	88917	87885	344	88469	87438	343	88469	87438	343	88469	87411	352	93.7	Role in DNA packaging; putative terminase	Due to alternative splicing it�s joined with orf number 44	47
48	88947	89900	317	88947	89900	317	88947	89900	317	88499	89464	321	88499	89464	321	88499	89464	321	74.1	-	-	48
49	89369	91153	594	89369	91153	594	89369	91153	594	88921	90717	598	88921	90717	598	88921	90717	598	85.8	Tegument protein; probable serine-threonine protein kinase	-	49
50	91305	92831	508	91135	92832	565	91305	92831	508	90699	82396	565	90699	92396	565	90699	92396	565	88.7	Deoxyribonuclease; role in maturation/packaging of DNA	-	50
51	92783	93007	74	92784	93008	74	-	-	-	92348	92575	75	92348	92575	75	92348	92575	75	84.7	Myristylated tegument protein; role in virion envelopment	Not predicted in EHV-1 with FindOrf 2003 version 1.0	51
52	94471	93119	450	94472	93120	450	94471	93119	450	94033	92681	450	94033	92681	450	94033	92681	450	86.7	Envelope glycoprotein (gM)	-	52
53	94389	97052	887	94390	97053	887	94389	97052	887	93951	96614	887	93951	96614	887	93951	96614	887	91.1	Origin-binding protein; helicase	-	53
54	97173	99323	716	97069	99324	751	97068	99323	751	96626	98881	751	96626	98881	751	96626	98881	751	79.2	Component of DNA helicase-primase complex	-	54
55	100331	99420	303	100332	99421	303	100331	99420	303	99850	98942	302	99850	98942	302	99850	98942	302	84.4	-	-	55
56	102390	100129	753	102391	100130	753	102390	100129	753	101891	99648	747	101891	99648	747	101891	99648	747	89.4	Minor capsid protein; role in DNA packaging	-	56
57	102374	105019	881	102375	105020	881	102374	105019	881	101875	104517	880	101875	104517	880	101875	104517	880	92.6	Component of DNA helicase-primase complex; helicase	-	57
58	105069	105746	225	105070	105747	225	105069	105746	225	104567	105250	227	104567	105250	227	104567	105250	227	83.9	-	-	58
59	106415	105876	179	106416	105877	179	106415	105876	179	105918	105358	186	105918	105358	186	105917	105366	183	69.5	-	-	59
60	107115	106477	212	107116	106478	212	107115	106477	212	106606	105971	211	106606	105971	211	106606	105971	211	89.1	-	-	60
61	108143	107205	312	108144	107206	312	108143	107205	312	107640	106696	314	107640	106696	314	107640	106696	314	78.5	Uracil-DNA glycosylase	-	61
62	108802	108146	218	108803	108147	218	108802	108146	218	108296	107637	219	108296	107637	219	108296	107637	219	74.2	Envelope glycoprotein (gL); complexes with gH	-	62
63	111984	110386	532	111985	110387	532	111984	110386	532	111713	110103	536	111713	110103	536	111785	110103	560	62.3	Transcriptional regulator	-	63
64	118590	114127	1487	118591	114128	1487	118590	114127	1487	117422	113094	1442	117422	113093	1442	117422	113094	1442	84.2	Transcriptional regulator	Found in normal and complementary sense	64
144569	149032	144568	149031	140628	144956	140628	144956
65	121367	122248	293	121368	122249	293	121367	122248	293	120069	120923	284	120069	120923	284	120069	120923	284	85.2	Hoste range determinant	Found in normal and complementary sense	65
141792	140911	283	141791	190910	137981	137127	137981	137127
66	122861	123571	236	122862	123572	236	122861	123571	236	121447	122133	228	121447	122133	228	121354	122133	259	80.3	Virion protein	Found in normal and complementary sense	66
140298	139588	140297	139587	136603	135917	136696	135917
67	125193	124375	272	125194	124376	272	125193	124375	272	123491	122631	286	123491	122631	286	123491	122631	286	68.0	Virulence determinant	Found in normal and complementary sense	67
137966	138784	137965	138783
68	126274	125018	418	126275	125019	418	126274	125018	418	124559	123585	324	124559	123585	324	124559	123585	324	60.0	-	-	68
69	126410	127558	382	126411	127559	382	126410	127558	382	124695	125849	384	124695	125849	384	124695	125849	384	86.9	Serine-threonine protein kinase	-	69
70	127680	128915	411	127681	128916	411	127680	128915	411	125970	127277	435	125970	127277	435	125970	127277	435	72.2	Envelope glycoprotein (gG)	-	70
71	129096	131489	797	129097	131490	797	129096	131489	797	127455	129707	750	127455	129707	750	127455	129707	750	61.1	Envelope glycoprotein (gp300)	-	71
72	131432	132790	452	131583	132791	402	131432	132790	452	129798	131006	402	129798	131006	402	129798	131006	402	76.6	Envelope glycoprotein (gD); role in cell entry	-	72
73	132898	134172	424	132899	134173	424	132898	134172	424	131111	132373	420	131111	132373	420	131111	132373	420	74.0	Envelope glycoprotein (gI)	-	73
74	134405	136057	550	134406	136058	550	134405	136057	550	132593	134239	548	132593	134239	548	132593	134239	548	85.4	Envelope glycoprotein (gE)	-	74
75	136054	136446	130	136055	136447	130	136054	136446	130	134273	134605	110	134273	134605	110	134273	134605	110	59.3	-	-	75
76	136782	137441	219	136783	137442	219	136782	137441	219	134911	135573	220	134911	135573	220	134911	135573	220	54.9	Tegument protein	-	76
Gens^*	Start	Stop	Codon	Start	Stop	Codon	Start	Stop	Codon	Start	Stop	Codon	Start	Stop	Codon	Start	Stop	Codon	% Identity^&	Characteristics	Comments	Gens^*
MedLine Entry:M86664	Telford, 1998	FindOrf 2003 version 1.0	MedLine Entry:AF030027	Telford, 1998	FindOrf 2003 version 1.0
EHV-1	EHV-4

^* From the first nucleotide of the initiation codon or exon to the last nucleotide of the stop codon or exon. Size of gene does not include the stop codon.

^& Telford E.A. et al(1998). The DNA sequence of equine herpesvirus-4.Journal of General Virology79,1197-1203.