BLASTP 2.2.5 [Nov-16-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1047029324-028568-22054 Query= AC090644|geneid_v1.1_predicted_protein_2|158_AA (157 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,348,542 sequences; 431,791,111 total letters Score E Sequences producing significant alignments: (bits) Value gi|28502174|ref|XP_197310.2| similar to over-expressed breast tu... 41 0.006 gi|20880876|ref|XP_157474.1| hypothetical protein XP_157474 [Mus... 36 0.16 gi|21230717|ref|NP_636634.1| methylmalonate-semialdehyde dehydro... 35 0.45 gi|14530645|emb|CAB61040.2| C. elegans TRA-1 protein (correspond... 35 0.45 gi|283561|pir||B43253 zinc finger protein short form protein tra... 35 0.45 gi|14530646|emb|CAC42377.1| C. elegans TRA-1 protein (correspond... 35 0.45 gi|464913|sp|P34708|TRA1_CAEEL Sex-determining transformer prote... 35 0.45 gi|1781344|emb|CAA71463.1| FK506 polyketide synthase [Streptomyc... 34 0.78 gi|27354161|dbj|BAC51149.1| blr5884 [Bradyrhizobium japonicum] >... 33 1.0 gi|21242065|ref|NP_641647.1| methylmalonate-semialdehyde dehydro... 33 1.3 gi|27525311|emb|CAD20309.1| alpha 2B adrenergic receptor [Chinch... 33 1.7 gi|23121162|gb|ZP_00103550.1| hypothetical protein [Desulfitobac... 33 1.7 gi|14517637|dbj|BAB61035.1| RGPR-p117 [Homo sapiens] >gi|1491647... 32 2.9 gi|15620915|dbj|BAB67821.1| KIAA1928 protein [Homo sapiens] 32 2.9 gi|21263186|gb|AAM44863.1|AC098694_2 Unknown protein [Oryza sati... 32 2.9 gi|28484782|ref|XP_134249.3| similar to hypothetical protein KIA... 32 3.9 gi|27687161|ref|XP_237488.1| similar to polypyrimidine tract bin... 32 3.9 gi|8469217|sp|Q39513|FATB_CUPHO Myristoyl-acyl carrier protein t... 31 5.0 gi|16758402|ref|NP_446061.1| HLA-B-associated transcript 3; HLA-... 31 5.0 gi|23019021|gb|ZP_00058734.1| hypothetical protein [Thermobifida... 31 5.0 gi|9366679|emb|CAB95441.1| hypothetical protein [Trypanosoma bru... 31 5.0 gi|27681983|ref|XP_236920.1| similar to over-expressed breast tu... 31 6.6 gi|21295827|gb|EAA07972.1| agCP1709 [Anopheles gambiae str. PEST] 31 6.6 gi|74541|pir||FOFVG9 gag polyprotein - avian sarcoma virus Y73 31 6.6 gi|18203852|gb|AAH21172.2|AAH21172 Unknown (protein for MGC:2657... 31 6.6 gi|23019303|gb|ZP_00059014.1| hypothetical protein [Thermobifida... 31 6.6 gi|223452|prf||0806225A genome Y73 31 6.6 gi|25777557|pir||T38459 hypothetical divergent repeat-containing... 30 8.6 gi|28482465|ref|XP_139391.2| hypothetical protein XP_139391 [Mus... 30 8.6 gi|3859830|gb|AAC72882.1| thioesterase FatB1-1 [Cuphea hookeriana] 30 8.6 gi|1182038|emb|CAA93290.1| hypothetical protein; similar to S. c... 30 8.6 gi|22945258|gb|AAN10363.1| CG3964-PB [Drosophila melanogaster] >... 30 8.6 gi|15292475|gb|AAK93506.1| SD03378p [Drosophila melanogaster] >g... 30 8.6 gi|15451285|dbj|BAB64446.1| hypothetical protein [Macaca fascicu... 30 8.6 gi|27353475|dbj|BAC50465.1| bll5200 [Bradyrhizobium japonicum] >... 30 8.6 gi|23108550|gb|ZP_00094767.1| hypothetical protein [Novosphingob... 30 8.6 ALIGNMENTS >gi|28502174|ref|XP_197310.2| similar to over-expressed breast tumor protein [Homo sapiens] [Mus musculus] Length = 338 Score = 40.8 bits (94), Expect = 0.006 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Query: 36 GVCMVGQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPS-PRQHSPPW-PVSVT 93 G +G ++ ++ LA EL+ ++P R G CGA + G R P+ R+ PW ++ Sbjct: 135 GDASIGARSSHRASLACELQRPLEPTRRG-CGAGLAPRRGRRSPTGGRRRGGPWGRLAAA 193 Query: 94 QQKTLNPRLGAALGAAGGPALAQ 116 +T P G GP LAQ Sbjct: 194 VARTAQPGAGREAARNPGPPLAQ 216 >gi|20880876|ref|XP_157474.1| hypothetical protein XP_157474 [Mus musculus] Length = 159 Score = 36.2 bits (82), Expect = 0.16 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 8 KAQDRKTEKEGDELIQDTGTLIAKAAGAGVCMVGQQTKRKSPLAKELETDMQPHRYGLCG 67 +++DR E++ E + G AK A + G++ + + +E + +Q +R G Sbjct: 2 ESEDRGAEEKDKEEGRRGGARAAKGK-ARTFIYGERVRHR----EEAQRRLQYNRLGKEA 56 Query: 68 AAMTCNMGARPPSPRQHSPPWPVSVTQQKTLNPRLGAALG 107 + C + + P+ H PPW + V + T+ PRL A G Sbjct: 57 ESAPCLLTEQLGGPKHHFPPWRLVVQRLGTMLPRLLARSG 96 >gi|21230717|ref|NP_636634.1| methylmalonate-semialdehyde dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21112309|gb|AAM40558.1| methylmalonate-semialdehyde dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 501 Score = 34.7 bits (78), Expect = 0.45 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Query: 62 RYGLCGAAMTCNMGARPPSPRQHSPPWPVSVTQQKTLNPRLGAALGAAGGPALAQRT 118 R L G + C MGA+ H+ P Q++TLN +GAA GAAG +A T Sbjct: 240 RASLAGKRVQCMMGAK-----NHAVVLP-DANQEQTLNAMVGAAFGAAGQRCMAAST 290 >gi|14530645|emb|CAB61040.2| C. elegans TRA-1 protein (corresponding sequence Y47D3A.6a) [Caenorhabditis elegans] Length = 1109 Score = 34.7 bits (78), Expect = 0.45 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 9/86 (10%) Query: 38 CMVGQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPS------PRQHSPPWPVS 91 C ++ K P +++T+ P + GL A + PPS P Q SPP S Sbjct: 38 CAKQMGSEDKQPGGGDVKTENDPSKNGLGSATSNFIQSSVPPSHQTLSNPLQLSPPAEAS 97 Query: 92 VTQQKTLN---PRLGAALGAAGGPAL 114 V QQ + P AALGA+ L Sbjct: 98 VAQQSGASQVFPTFQAALGASSDELL 123 >gi|283561|pir||B43253 zinc finger protein short form protein tra-1 - Caenorhabditis elegans gi|1213640|gb|AAA91281.1| transformer protein gi|25151987|ref|NP_499440.2| TRAnsformer : XX animals transformed into males TRA-1, HERmaphrodization of XO animals HER-2, Sex determination zinc-finger protein, alternative form expressed in L2 larvae family member (30.9 kD) (tra-1) [Caenorhabditis elegans] Length = 288 Score = 34.7 bits (78), Expect = 0.45 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 9/86 (10%) Query: 38 CMVGQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPS------PRQHSPPWPVS 91 C ++ K P +++T+ P + GL A + PPS P Q SPP S Sbjct: 39 CAKQMGSEDKQPGGGDVKTENDPSKNGLGSATSNFIQSSVPPSHQTLSNPLQLSPPAEAS 98 Query: 92 VTQQKTLN---PRLGAALGAAGGPAL 114 V QQ + P AALGA+ L Sbjct: 99 VAQQSGASQVFPTFQAALGASSDELL 124 >gi|14530646|emb|CAC42377.1| C. elegans TRA-1 protein (corresponding sequence Y47D3A.6b) [Caenorhabditis elegans] Length = 287 Score = 34.7 bits (78), Expect = 0.45 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 9/86 (10%) Query: 38 CMVGQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPS------PRQHSPPWPVS 91 C ++ K P +++T+ P + GL A + PPS P Q SPP S Sbjct: 38 CAKQMGSEDKQPGGGDVKTENDPSKNGLGSATSNFIQSSVPPSHQTLSNPLQLSPPAEAS 97 Query: 92 VTQQKTLN---PRLGAALGAAGGPAL 114 V QQ + P AALGA+ L Sbjct: 98 VAQQSGASQVFPTFQAALGASSDELL 123 >gi|464913|sp|P34708|TRA1_CAEEL Sex-determining transformer protein 1 gi|25151994|ref|NP_741274.1| TRAnsformer : XX animals transformed into males TRA-1, HERmaphrodization of XO animals HER-2, Sex determination zinc-finger protein, alternative form expressed in embryos (122.8 kD) (tra-1) [Caenorhabditis elegans] gi|156470|gb|AAB59181.1| tra-1 gi|283560|pir||A43253 Large tra-1 protein - Caenorhabditis elegans Length = 1110 Score = 34.7 bits (78), Expect = 0.45 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 9/86 (10%) Query: 38 CMVGQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPS------PRQHSPPWPVS 91 C ++ K P +++T+ P + GL A + PPS P Q SPP S Sbjct: 39 CAKQMGSEDKQPGGGDVKTENDPSKNGLGSATSNFIQSSVPPSHQTLSNPLQLSPPAEAS 98 Query: 92 VTQQKTLN---PRLGAALGAAGGPAL 114 V QQ + P AALGA+ L Sbjct: 99 VAQQSGASQVFPTFQAALGASSDELL 124 >gi|1781344|emb|CAA71463.1| FK506 polyketide synthase [Streptomyces sp. MA6548] gi|7481906|pir||T30283 polyketide synthase - Streptomyces sp. (strain MA6548) Length = 6420 Score = 33.9 bits (76), Expect = 0.78 Identities = 37/108 (34%), Positives = 45/108 (41%), Gaps = 26/108 (24%) Query: 76 ARPPSPRQHSPPW-----PVSVT---QQKTLNPRLGAA--LGAAGGPALAQRTSLCSNPE 125 A P P QH W V VT Q+K +P LGAA L GG L R SL S+P Sbjct: 801 ALPTYPFQHKDYWLRATAQVDVTGAGQEKVAHPLLGAAVALPGTGGTVLTGRVSLASHPW 860 Query: 126 I-------ILLSPGLDLLWLQVS---------LCRLYLEASLFLASSG 157 + +L PG L L V L L +E L L ++G Sbjct: 861 LGGHAVNGTVLLPGAAFLELAVRAGDETGSDLLHELVVETPLTLPATG 908 >gi|27354161|dbj|BAC51149.1| blr5884 [Bradyrhizobium japonicum] gi|27380995|ref|NP_772524.1| blr5884 [Bradyrhizobium japonicum] Length = 155 Score = 33.5 bits (75), Expect = 1.0 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Query: 4 LGMGKAQDRKTEKEGDELIQDTGTLIAKAAGAGVCMVGQQTKRKSPLAKELETDMQP-HR 62 LG+G + +T ++++ G IA A GV M+ + T+R +PL E+ ++P H+ Sbjct: 87 LGLGVVKLGRTSVTFEQVVFSQGKCIASATSVGV-MLDETTRRPAPLTAEIVEKLRPWHK 145 Query: 63 YGL 65 G+ Sbjct: 146 RGI 148 >gi|21242065|ref|NP_641647.1| methylmalonate-semialdehyde dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] gi|21107470|gb|AAM36183.1| methylmalonate-semialdehyde dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] Length = 544 Score = 33.1 bits (74), Expect = 1.3 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Query: 62 RYGLCGAAMTCNMGARPPSPRQHSPPWPVSVTQQKTLNPRLGAALGAAGGPALAQRT 118 R L G + C MGA+ H+ P +++TLN +GAA GAAG +A T Sbjct: 283 RASLAGKRVQCMMGAK-----NHAVVLP-DANREQTLNAMVGAAFGAAGQRCMAAST 333 >gi|27525311|emb|CAD20309.1| alpha 2B adrenergic receptor [Chinchilla lanigera] Length = 389 Score = 32.7 bits (73), Expect = 1.7 Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 14/111 (12%) Query: 15 EKEGDELIQDTGTLIAKAAGAGVCMVGQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNM 74 EKE +E +D GT+ A + GQ ++ LA E E + + C Sbjct: 243 EKEEEETPEDLGTVTLPPRWAALPTSGQGQEKGVRLAPEEEAEEEEEE---------CEP 293 Query: 75 GARPPSPRQHSPPWPVSVTQQKTL-----NPRLGAALGAAGGPALAQRTSL 120 A P SP P P + L LG +GA GG +RT + Sbjct: 294 QASPVSPASVCSPPPQQPQGSRVLATLRGQVLLGRGMGAVGGQWWRRRTQM 344 >gi|23121162|gb|ZP_00103550.1| hypothetical protein [Desulfitobacterium hafniense] Length = 599 Score = 32.7 bits (73), Expect = 1.7 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%) Query: 62 RYGLCGAAMTCNMGARPPSPRQHSPPWPVSVTQQKTLNPRLGAALGAAGGPALAQRTSL 120 R L G + C MGA+ H+ P +++TLN GAA GAAG +A T++ Sbjct: 349 RASLAGKRVQCMMGAK-----NHAVVLP-DANKEQTLNALAGAAFGAAGQRCMAASTAV 401 >gi|14517637|dbj|BAB61035.1| RGPR-p117 [Homo sapiens] gi|14916477|ref|NP_149118.1| regucalcin gene promotor region related protein; RGPR-p117; KIAA1928 protein [Homo sapiens] Length = 1060 Score = 32.0 bits (71), Expect = 2.9 Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 23/105 (21%) Query: 41 GQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPSPRQHSPPWP-VSVTQQ---- 95 G + SP ++E PH+ GL G ++T PSP SPP P VS + Sbjct: 930 GDEDSSDSPDSEETPRASSPHQAGL-GLSLT-------PSPE--SPPLPDVSAFSRGRGG 979 Query: 96 -------KTLNPRLGAALGAAGGPALAQRTSLCSNPEIILLSPGL 133 + GA +G GP LCSNP ++L P L Sbjct: 980 GEGRGSASSGGAAAGAGVGGLSGPESVS-FELCSNPGVLLPPPAL 1023 >gi|15620915|dbj|BAB67821.1| KIAA1928 protein [Homo sapiens] Length = 757 Score = 32.0 bits (71), Expect = 2.9 Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 23/105 (21%) Query: 41 GQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPSPRQHSPPWP-VSVTQQ---- 95 G + SP ++E PH+ GL G ++T PSP SPP P VS + Sbjct: 627 GDEDSSDSPDSEETPRASSPHQAGL-GLSLT-------PSPE--SPPLPDVSAFSRGRGG 676 Query: 96 -------KTLNPRLGAALGAAGGPALAQRTSLCSNPEIILLSPGL 133 + GA +G GP LCSNP ++L P L Sbjct: 677 GEGRGSASSGGAAAGAGVGGLSGPESVS-FELCSNPGVLLPPPAL 720 >gi|21263186|gb|AAM44863.1|AC098694_2 Unknown protein [Oryza sativa (japonica cultivar-group)] gi|14028996|gb|AAK52537.1|AC078891_6 Unknown protein [Oryza sativa] gi|14029002|gb|AAK52543.1|AC078891_12 Unknown protein [Oryza sativa] Length = 344 Score = 32.0 bits (71), Expect = 2.9 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 11/59 (18%) Query: 59 QPHRYGLCGAAMTCNMGARPPSPRQHSPP-----------WPVSVTQQKTLNPRLGAAL 106 QPH CGA N GA PP P +PP W QQ+ +PR AL Sbjct: 60 QPHHPRDCGANGNANGGAMPPPPATEAPPSMPMNFARSDMWMHPQQQQQHHHPREHKAL 118 >gi|28484782|ref|XP_134249.3| similar to hypothetical protein KIAA0616 - human (fragment) [Mus musculus] Length = 338 Score = 31.6 bits (70), Expect = 3.9 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 75 GARPPSPRQHSPPWPVSVTQQKTLNPRLGAALGAAGGPALAQRTSLCSNPEIILLS 130 G++ P P+ PP P V+QQ+ P++ L GGP L SL P++ LS Sbjct: 66 GSQQPPPQPQPPPPPPPVSQQQPPPPQVSVGL-PQGGPLLPS-ASLTRGPQLPPLS 119 >gi|27687161|ref|XP_237488.1| similar to polypyrimidine tract binding protein 1; hnRNP I [Mus musculus] [Rattus norvegicus] Length = 304 Score = 31.6 bits (70), Expect = 3.9 Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 10/59 (16%) Query: 64 GLCGAAMTCNMGARPPSPRQHSPP------WPVSVTQQKTLNPRLGAALGAAGGPALAQ 116 G+C TC G R P P H PP W V + A+ G GGP Q Sbjct: 126 GVC----TCTDGRRQPGPAGHEPPEWAQAAWEVGAHHTVKASECAAASRGGTGGPGTDQ 180 >gi|8469217|sp|Q39513|FATB_CUPHO Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier protein] hydrolase) (PATE) gi|758701|gb|AAC48990.1| 16:0-ACP thioesterase preprotein Length = 415 Score = 31.2 bits (69), Expect = 5.0 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Query: 9 AQDRKTEKEGDELIQD--TGTLIAKAAGAGVCMVGQQTKRKSPLAKELETDMQPH 61 A+ K D LI D TG ++ +A+ V M+ Q+T+R S + E+ +++PH Sbjct: 221 AKSGKNGMRRDWLISDCNTGEILTRASSVWV-MMNQKTRRLSKIPDEVRNEIEPH 274 >gi|16758402|ref|NP_446061.1| HLA-B-associated transcript 3; HLA-B associated transcript 3 [Rattus norvegicus] gi|4587081|dbj|BAA76607.1| BAT3 [Rattus norvegicus] Length = 1098 Score = 31.2 bits (69), Expect = 5.0 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 75 GARPPSPRQHSPPWPVSVTQQ--KTLNPRLGAALGAAGGPALAQRTSLCSNPEIILLSPG 132 G P P Q PP P + Q + L LG A AGGP+LA T + P + G Sbjct: 601 GPAPGGPAQPPPPQPSAADLQFSQLLGNLLGPAGPGAGGPSLASPTITVAVPGVPAFLQG 660 Query: 133 L 133 + Sbjct: 661 M 661 >gi|23019021|gb|ZP_00058734.1| hypothetical protein [Thermobifida fusca] Length = 644 Score = 31.2 bits (69), Expect = 5.0 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 76 ARPPSPRQ--HSPPWPVSV------TQQKTLNPRLGAALGAAGGPALAQRTSLCSNPEII 127 A PP P +PPW T+QKT R A+ AGG A+A ++ Sbjct: 355 AAPPFPEHSPQTPPWAAPTPPGGNGTEQKTRGTRFSPAIAIAGGSAVALLAGAVIGGLVL 414 Query: 128 LLSP 131 SP Sbjct: 415 FRSP 418 >gi|9366679|emb|CAB95441.1| hypothetical protein [Trypanosoma brucei] Length = 295 Score = 31.2 bits (69), Expect = 5.0 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 94 QQKTLNPRLGAALGAAGGPALAQRTSLCSNP-EIILLSPGLDLLWLQVSLCRLY 146 +++T++ R + G G + + T CS P +I L PG L WL S CR+Y Sbjct: 15 REETVSKRGKRSRGTGGDDKITRGT--CSQPFSVITLPPGKLLEWLVCSPCRVY 66 >gi|27681983|ref|XP_236920.1| similar to over-expressed breast tumor protein [Homo sapiens] [Rattus norvegicus] Length = 499 Score = 30.8 bits (68), Expect = 6.6 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 9/102 (8%) Query: 36 GVCMVGQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPSPRQHSPPWPVSVTQQ 95 G +G ++ ++ LA EL+ ++P R G CGA + G R P + P ++Q Sbjct: 243 GDASIGARSSHRASLACELQGPLEPTRRG-CGAGLAPKRGRRSP-----TVAIPSEASKQ 296 Query: 96 KTLNPRLGAALGAAGGPALAQRTSLCSNPEIILLSPGLDLLW 137 + N G P +S S PE L LW Sbjct: 297 RDRN---SPQTPKEGSPCPTCSSSSESEPEGYFFGQRLPDLW 335 >gi|21295827|gb|EAA07972.1| agCP1709 [Anopheles gambiae str. PEST] Length = 529 Score = 30.8 bits (68), Expect = 6.6 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 6/59 (10%) Query: 62 RYGLCGAAMTCNMGARPPSPRQHSPPWPVSVTQQKTLNPRLGAALGAAGGPALAQRTSL 120 R G G + CNMGA+ ++ TLN GAA GAAG +A T++ Sbjct: 267 RAGRNGKRVQCNMGAKNHGVIM------ADANKENTLNQLAGAAFGAAGQRCMALSTAV 319 >gi|74541|pir||FOFVG9 gag polyprotein - avian sarcoma virus Y73 Length = 284 Score = 30.8 bits (68), Expect = 6.6 Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 10/95 (10%) Query: 34 GAGVCM----VGQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPSPRQHSPPWP 89 G+G+C VG+Q KR + E R+ G + AR P P P P Sbjct: 179 GSGLCPSLAGVGEQRKRGDDTPRGAEQPRAEPRH--TGLTLGPARSARLPPPA----PLP 232 Query: 90 VSVTQQKTLNPRLGAALGAAGGPALAQRTSLCSNP 124 S+ PR+ A G AGG L + S+P Sbjct: 233 SSLPLLPPFPPRVAAVPGGAGGAPLPSLSPSFSHP 267 >gi|18203852|gb|AAH21172.2|AAH21172 Unknown (protein for MGC:26578) [Homo sapiens] gi|18203854|gb|AAH21710.1|AAH21710 Unknown (protein for MGC:26593) [Homo sapiens] Length = 396 Score = 30.8 bits (68), Expect = 6.6 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 62 RYGLCGAAMTCNMGARPPSPRQHSPPWPVSVTQQKTLNPRLGAALGAAGGPALAQRTSLC 121 R G A+ +RP P Q P + Q + A L GGPAL R+ L Sbjct: 93 RVDFSGIAVPGTSSSRPQHPGQQQQRTPAAQRSQGLASGEKVAGLQGLGGPALI-RSMLL 151 Query: 122 SNPEIILL 129 SNP + L Sbjct: 152 SNPHDLSL 159 >gi|23019303|gb|ZP_00059014.1| hypothetical protein [Thermobifida fusca] Length = 496 Score = 30.8 bits (68), Expect = 6.6 Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 15/122 (12%) Query: 38 CMVGQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPSPRQHSPPWPVSVTQQKT 97 C+VG + RK+ L T+M + L G+A T + +P V+V + Sbjct: 4 CVVGPEWMRKTTLRSSSVTNMSQRPFWLAGSATTGDNELTVTNPYTGQTVATVAVPSPEQ 63 Query: 98 LNPRLGAALGA----AGGPALAQRTSLC-----------SNPEIILLSPGLDLLWLQVSL 142 ++ + AA GA A PA + T+L ++I G +LW + + Sbjct: 64 VDQAVAAAHGALDATAALPAHVRATALAHVARRLQERSEEIAQLITAESGKPILWARAEV 123 Query: 143 CR 144 R Sbjct: 124 GR 125 >gi|223452|prf||0806225A genome Y73 Length = 812 Score = 30.8 bits (68), Expect = 6.6 Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 10/95 (10%) Query: 34 GAGVCM----VGQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPSPRQHSPPWP 89 G+G+C VG+Q KR + E R+ G + AR P P P P Sbjct: 179 GSGLCPSLAGVGEQRKRGDDTPRGAEQPRAEPRH--TGLTLGPARSARLPPPA----PLP 232 Query: 90 VSVTQQKTLNPRLGAALGAAGGPALAQRTSLCSNP 124 S+ PR+ A G AGG L + S+P Sbjct: 233 SSLPLLPPFPPRVAAVPGGAGGAPLPSLSPSFSHP 267 >gi|25777557|pir||T38459 hypothetical divergent repeat-containing protein - fission yeast (Schizosaccharomyces pombe) gi|1723244|sp|Q10172|YDC9_SCHPO Hypothetical protein C25G10.09c in chromosome I Length = 1794 Score = 30.4 bits (67), Expect = 8.6 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 39 MVGQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPSPRQHSPPWPVSVTQQKTL 98 M+ Q+T + P ++ M P R G+ M G +P P P P Q Sbjct: 683 MMPQRTGMQ-PQMPGMQQPMAPQRTGM-QPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMA 740 Query: 99 NPRLGAALGAAGGPALAQRT 118 R G GGP L QRT Sbjct: 741 PQRTGMQPQMTGGPMLPQRT 760 >gi|28482465|ref|XP_139391.2| hypothetical protein XP_139391 [Mus musculus] Length = 352 Score = 30.4 bits (67), Expect = 8.6 Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 12/95 (12%) Query: 42 QQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPSPRQHSPPWPVSVTQQKTLNPR 101 Q + PL +E D G GA +TC +P Q PWP + Q L R Sbjct: 109 QSDSSQQPLLQEC-LDASTETPGAQGALLTC-------TPAQEKAPWPPGIGQPLHLEIR 160 Query: 102 LGAALGAAGGPALAQRTSLCSNPEIILLSPGLDLL 136 + + LC L+SPGLD L Sbjct: 161 QETPT----DNEQSFQIGLCPRHTNSLMSPGLDAL 191 >gi|3859830|gb|AAC72882.1| thioesterase FatB1-1 [Cuphea hookeriana] Length = 414 Score = 30.4 bits (67), Expect = 8.6 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Query: 9 AQDRKTEKEGDELIQD--TGTLIAKAAGAGVCMVGQQTKRKSPLAKELETDMQPH 61 A+ K D LI D TG ++ +A+ V M+ Q+T+R S + E+ +++PH Sbjct: 221 AKSGKNGMRRDWLISDCNTGEILTRASSVWV-MMNQKTRRLSKIPDEVRHEIEPH 274 >gi|1182038|emb|CAA93290.1| hypothetical protein; similar to S. cerevisae PAN1 Protein involved in organization of the actin cytoskeleton and in endocytosis; divergent repeat-containing [Schizosaccharomyces pombe] Length = 1748 Score = 30.4 bits (67), Expect = 8.6 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 39 MVGQQTKRKSPLAKELETDMQPHRYGLCGAAMTCNMGARPPSPRQHSPPWPVSVTQQKTL 98 M+ Q+T + P ++ M P R G+ M G +P P P P Q Sbjct: 683 MMPQRTGMQ-PQMPGMQQPMAPQRTGM-QPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMA 740 Query: 99 NPRLGAALGAAGGPALAQRT 118 R G GGP L QRT Sbjct: 741 PQRTGMQPQMTGGPMLPQRT 760 >gi|22945258|gb|AAN10363.1| CG3964-PB [Drosophila melanogaster] gi|24581551|ref|NP_722946.1| CG3964-PB [Drosophila melanogaster] Length = 989 Score = 30.4 bits (67), Expect = 8.6 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 9/62 (14%) Query: 67 GAAMTCNMGAR--PPSPRQHSPPWPVSVTQQKTLNPRLGAALGAAGGPAL--AQRTSLCS 122 GA + ++ AR PP +Q SPP P +K L P A LG GG + AQR + Sbjct: 117 GATASDSVSARYSPPGQKQRSPPSP-----RKRLTPEKVANLGGGGGGSKVGAQRIIIRG 171 Query: 123 NP 124 P Sbjct: 172 TP 173 >gi|15292475|gb|AAK93506.1| SD03378p [Drosophila melanogaster] gi|22945259|gb|AAF51056.2| CG3964-PA [Drosophila melanogaster] gi|19920664|ref|NP_608810.1| CG3964-PA [Drosophila melanogaster] Length = 982 Score = 30.4 bits (67), Expect = 8.6 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 9/62 (14%) Query: 67 GAAMTCNMGAR--PPSPRQHSPPWPVSVTQQKTLNPRLGAALGAAGGPAL--AQRTSLCS 122 GA + ++ AR PP +Q SPP P +K L P A LG GG + AQR + Sbjct: 117 GATASDSVSARYSPPGQKQRSPPSP-----RKRLTPEKVANLGGGGGGSKVGAQRIIIRG 171 Query: 123 NP 124 P Sbjct: 172 TP 173 >gi|15451285|dbj|BAB64446.1| hypothetical protein [Macaca fascicularis] Length = 627 Score = 30.4 bits (67), Expect = 8.6 Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 7/108 (6%) Query: 53 ELETDMQPHRYGLCGAAMTCNMGARPPSPRQHSPPWPVSVTQQKTLNPRLG---AALGAA 109 E+E HR L ++T R +P S P S+ Q P G A L A Sbjct: 90 EVEKVEASHRRALKARSLTAQKSPRTLTPVPTSSP---SLPQTPASAPASGPSWARLSAP 146 Query: 110 GG-PALAQRTSLCSNPEIILLSPGLDLLWLQVSLCRLYLEASLFLASS 156 G PA S P +LL P LDL W ++ L E +L A + Sbjct: 147 GPEPAPVGAPVPTSTPCPVLLCPALDLGWRRMELSHHSSERTLSYAKA 194 >gi|27353475|dbj|BAC50465.1| bll5200 [Bradyrhizobium japonicum] gi|27380311|ref|NP_771840.1| bll5200 [Bradyrhizobium japonicum] Length = 160 Score = 30.4 bits (67), Expect = 8.6 Identities = 18/45 (40%), Positives = 22/45 (48%) Query: 103 GAALGAAGGPALAQRTSLCSNPEIILLSPGLDLLWLQVSLCRLYL 147 GAALGA G A A SL + I G L WL +S+ Y+ Sbjct: 91 GAALGALGMLAFAMVFSLTAETSIAAAFIGASLAWLVISMVAWYV 135 >gi|23108550|gb|ZP_00094767.1| hypothetical protein [Novosphingobium aromaticivorans] Length = 419 Score = 30.4 bits (67), Expect = 8.6 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 9/75 (12%) Query: 89 PVSVTQQKTLNPRLGAALGAAGGPALAQRTSLCSNPEIILL--------SPGLDLLWLQV 140 PV V + NPR G AA GPA+ + S + LL PGL +L+L Sbjct: 263 PVPVNFNRLRNPRWGMVAVAAAGPAMNFVLATLSAIALGLLVRATDLGGEPGLGVLFLSD 322 Query: 141 SLCRLYLEASLFLAS 155 +L R +L +LFL + Sbjct: 323 NL-RNFLIVNLFLGA 336 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Feb 26, 2003 10:23 PM Number of letters in database: 431,791,111 Number of sequences in database: 1,348,542 Lambda K H 0.317 0.132 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 135,990,407 Number of Sequences: 1348542 Number of extensions: 5459717 Number of successful extensions: 16118 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 33 Number of HSP's that attempted gapping in prelim test: 16109 Number of HSP's gapped (non-prelim): 41 length of query: 157 length of database: 431,791,111 effective HSP length: 113 effective length of query: 44 effective length of database: 279,405,865 effective search space: 12293858060 effective search space used: 12293858060 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 67 (30.4 bits)