Homo Sapiens 3 BAC RP11-758L3 Analysis

HOMO SAPIENS 3 BAC RP11-758L3 ANALYSIS

Clustalw results for the Genscan sixth gene

Sequence 1: gi|3941534|gb|AAC82375.1| VENTX2 protein 258 aa
Sequence 2: 06_25_22|GENSCAN_predicted_pep 428 aa

CLUSTAL W (1.81) multiple sequence alignment

gi|3941534|gb|AAC82375.1|           --------------------------------MRLSSSPPRG-----PQQ 13
06_25_22|GENSCAN_predicted_pep      MEVLARVFRQEKEMKGIHIGKEEHKLFLFADNMTLCLEKTKDSVKKLVEQ 50
                                                                    * *. . .:.      :*
gi|3941534|gb|AAC82375.1|           LSSFGSVDWLSQSSCSGPTHTPRPADFSLGSLPGPGQTSGAREPPQAVSI 63
06_25_22|GENSCAN_predicted_pep      PSSFGSVDWLCLSSCSGSTHTPRPADVSPGSLPGPGQTFGTREPPQAVST 100
                                     *********. *****.********.* ********* *:********
gi|3941534|gb|AAC82375.1|           KEAAGSSNLPAPERTMAGLSKEPNTLRAPRVRTAFTMEQVRTLEGVFQHH 113
06_25_22|GENSCAN_predicted_pep      KEAS-SSNLHAPERTVAGLT--------------FTTEQVRALEGVFRHH 135
                                    ***: **** *****:***:              ** ****:*****:**
gi|3941534|gb|AAC82375.1|           QYLSPLERKRLAREMQLSEVQIKTWFQNRRMKHKRQMQDPQLHSPFSGSL 163
06_25_22|GENSCAN_predicted_pep      QYLGPLERNWLAREMQLSEVQIKTWFQNRRMKHKRQMQDSQLNGPLSGSL 185
                                    ***.****: *****************************.**:.*:****
gi|3941534|gb|AAC82375.1|           HAPPAFYSTSSGLANGLQLLCPWAPLSGPQALMLPP-------------- 199
06_25_22|GENSCAN_predicted_pep      HGPPAFHSPSSGLANGLQLLCPWAPLPGSPGCPLAPSGVSDKWIKRPWPL 235
                                    *.****:*.*****************.*. . *.*
gi|3941534|gb|AAC82375.1|           ------GSFWGLCQVAQEALASAGASCCG--------------------Q 223
06_25_22|GENSCAN_predicted_pep      RGLPAAGSLWHTTPHAQEVVRISWDQPCPRGPGACVLCQRQGMHLRKRLR 285
                                          **:*     ***.: : . *                     :
gi|3941534|gb|AAC82375.1|           PLASHPPTPGRPSLGPALSTG----PRGLCAMP----------------- 252
06_25_22|GENSCAN_predicted_pep      LHASHTSGLCRSHLTPTRRTQLFCLHRGGTSHPDPRKGSGDFWRIYLLKS 335
                                      ***..   *. * *: *      ** : *
gi|3941534|gb|AAC82375.1|           -----------------QTGDAF--------------------------- 258
06_25_22|GENSCAN_predicted_pep      PLHLKKKKKKKKGQKAIDTGEVWRKGNSYTLLVGMYISTTIVENTVEIYQ 385
                                                     :**:.:
gi|3941534|gb|AAC82375.1|           -------------------------------------------
06_25_22|GENSCAN_predicted_pep      KTKNTATIFISNPTTEGLSKGIETSEYIKGIPALACLSQLYSR 428